Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_M06
         (403 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41515-1|AAA91179.1|   70|Homo sapiens DSS1 protein.                   57   2e-08
CR456887-1|CAG33168.1|   70|Homo sapiens SHFM1 protein.                57   2e-08
BC032782-1|AAH32782.1|   70|Homo sapiens split hand/foot malform...    57   2e-08
AC073230-1|AAQ93368.1|   70|Homo sapiens unknown protein.              57   2e-08
U97670-1|AAC78729.1|  258|Homo sapiens eukaryotic translation in...    29   4.4  

>U41515-1|AAA91179.1|   70|Homo sapiens DSS1 protein.
          Length = 70

 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 26/49 (53%), Positives = 30/49 (61%)
 Frame = +2

Query: 59  KQKVDLGXXXXXXXXXXXPAENWGTEDADDEDVSVWEDNWEDDIVQDDF 205
           KQ VDLG           PAE+W   D +DED  VWEDNW+DD V+DDF
Sbjct: 5   KQPVDLGLLEEDDEFEEFPAEDWAGLD-EDEDAHVWEDNWDDDNVEDDF 52


>CR456887-1|CAG33168.1|   70|Homo sapiens SHFM1 protein.
          Length = 70

 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 26/49 (53%), Positives = 30/49 (61%)
 Frame = +2

Query: 59  KQKVDLGXXXXXXXXXXXPAENWGTEDADDEDVSVWEDNWEDDIVQDDF 205
           KQ VDLG           PAE+W   D +DED  VWEDNW+DD V+DDF
Sbjct: 5   KQPVDLGLLEEDDEFEEFPAEDWAGLD-EDEDAHVWEDNWDDDNVEDDF 52


>BC032782-1|AAH32782.1|   70|Homo sapiens split hand/foot
           malformation (ectrodactyly) type 1 protein.
          Length = 70

 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 26/49 (53%), Positives = 30/49 (61%)
 Frame = +2

Query: 59  KQKVDLGXXXXXXXXXXXPAENWGTEDADDEDVSVWEDNWEDDIVQDDF 205
           KQ VDLG           PAE+W   D +DED  VWEDNW+DD V+DDF
Sbjct: 5   KQPVDLGLLEEDDEFEEFPAEDWAGLD-EDEDAHVWEDNWDDDNVEDDF 52


>AC073230-1|AAQ93368.1|   70|Homo sapiens unknown protein.
          Length = 70

 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 26/49 (53%), Positives = 30/49 (61%)
 Frame = +2

Query: 59  KQKVDLGXXXXXXXXXXXPAENWGTEDADDEDVSVWEDNWEDDIVQDDF 205
           KQ VDLG           PAE+W   D +DED  VWEDNW+DD V+DDF
Sbjct: 5   KQPVDLGLLEEDDEFEEFPAEDWAGLD-EDEDAHVWEDNWDDDNVEDDF 52


>U97670-1|AAC78729.1|  258|Homo sapiens eukaryotic translation
           initiation factor eIF3, p35 subunit protein.
          Length = 258

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +2

Query: 119 ENWGTEDADDEDVSVWEDNWEDD 187
           + WG ED +DEDV   +DNW+DD
Sbjct: 37  DRWGGED-EDEDV---KDNWDDD 55


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,235,762
Number of Sequences: 237096
Number of extensions: 654295
Number of successful extensions: 1738
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1723
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2928276690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)