BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I09A02NGRL0001_M05 (664 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 123 1e-28 SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 94 1e-19 SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 64 7e-11 SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10 SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08 SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07 SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 50 1e-06 SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 48 5e-06 SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 48 7e-06 SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 48 9e-06 SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19) 48 9e-06 SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18) 48 9e-06 SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21) 47 2e-05 SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25) 46 3e-05 SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05 SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 46 3e-05 SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05 SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05 SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24) 44 1e-04 SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04 SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 42 4e-04 SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001 SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 40 0.001 SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001 SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28) 40 0.002 SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 38 0.006 SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 38 0.007 SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13) 37 0.017 SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.029 SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15) 36 0.029 SB_76| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.051 SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.068 SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12 SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23) 33 0.27 SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.36 SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07) 32 0.36 SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.36 SB_45079| Best HMM Match : RRM_1 (HMM E-Value=0.0027) 32 0.36 SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18) 32 0.48 SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.48 SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11) 31 0.63 SB_15485| Best HMM Match : DUF28 (HMM E-Value=9.6) 31 0.63 SB_46269| Best HMM Match : APG5 (HMM E-Value=8.2) 31 0.84 SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1 SB_13874| Best HMM Match : YTV (HMM E-Value=5.2) 31 1.1 SB_57035| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5 SB_51719| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5 SB_35782| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5 SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5 SB_11606| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5 SB_51729| Best HMM Match : HABP4_PAI-RBP1 (HMM E-Value=1.2) 30 1.5 SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) 30 1.5 SB_41314| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5 SB_10891| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5 SB_59346| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9 SB_47978| Best HMM Match : W2 (HMM E-Value=4.7) 30 1.9 SB_45111| Best HMM Match : rve (HMM E-Value=1.2e-24) 30 1.9 SB_34804| Best HMM Match : rve (HMM E-Value=1.2e-24) 30 1.9 SB_30663| Best HMM Match : rve (HMM E-Value=3.3e-25) 30 1.9 SB_16139| Best HMM Match : rve (HMM E-Value=3.6e-21) 30 1.9 SB_48236| Best HMM Match : DNA_pol_B_2 (HMM E-Value=8.6e-09) 30 1.9 SB_40318| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9 SB_38075| Best HMM Match : ELK (HMM E-Value=8.7) 30 1.9 SB_2798| Best HMM Match : DNA_pol_B_2 (HMM E-Value=7.9e-10) 30 1.9 SB_37544| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6 SB_37043| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.00036) 29 2.6 SB_43406| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4 SB_40242| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4 SB_29630| Best HMM Match : Sigma54_activat (HMM E-Value=1) 29 3.4 SB_149| Best HMM Match : rve (HMM E-Value=6.3e-20) 29 3.4 SB_38097| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4 SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28) 29 4.5 SB_42814| Best HMM Match : DNA_pol_B_2 (HMM E-Value=3.4e-09) 29 4.5 SB_51083| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9 SB_52029| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 28 5.9 SB_38124| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9 SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8 >SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) Length = 718 Score = 123 bits (297), Expect = 1e-28 Identities = 67/140 (47%), Positives = 91/140 (65%), Gaps = 10/140 (7%) Frame = +3 Query: 273 MNP--GPPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVN 446 MNP G NYP+ASLYVGDL D+TEAML+EKFS+AG VLSIRVCRD++TRRSLGYAYVN Sbjct: 1 MNPSTGAANYPIASLYVGDLAPDVTEAMLYEKFSTAGSVLSIRVCRDLVTRRSLGYAYVN 60 Query: 447 FQQPAD--AERALDSMNFDIIKGRPIRI-MWSQRDPSLRKSGV-----GNVFIKNLDKTI 602 FQQP A A+ ++ ++ + + + W + + K G NV++KN + Sbjct: 61 FQQPGHDAALEAIARVDGMLLNDKKVFVGRWMSKKERIEKMGTQPKKFTNVYVKNFGDDM 120 Query: 603 DNKAMYDTFSAFGNILSCKV 662 D++ M + + G I+S KV Sbjct: 121 DDEQMKEICAEAGKIVSLKV 140 Score = 56.8 bits (131), Expect = 1e-08 Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 17/151 (11%) Frame = +3 Query: 261 KIFKMNPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAY 440 +I KM P + ++YV + D+ + + E + AG ++S++V D +S G+ + Sbjct: 97 RIEKMGTQPKKF--TNVYVKNFGDDMDDEQMKEICAEAGKIVSLKVMTDP-EGKSKGFGF 153 Query: 441 VNFQQPADAERALDSMNFDIIKGRPI-----------------RIMWSQRDPSLRKSGVG 569 V+F+ P +AE A++ +N I GR + I +++ R GV Sbjct: 154 VSFETPEEAEEAVNVLNGKEIGGRRLWAGRAKKRAERAAEVKAEIEKKRQERINRFQGV- 212 Query: 570 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKV 662 N++IKNLD ID++ + + FS +G I S KV Sbjct: 213 NLYIKNLDDPIDDERLREEFSPYGTISSAKV 243 Score = 46.4 bits (105), Expect = 2e-05 Identities = 25/78 (32%), Positives = 43/78 (55%) Frame = +3 Query: 306 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDS 485 +LY+ +L I + L E+FS G + S +V +D S G+ +V F P +A +A+ Sbjct: 213 NLYIKNLDDPIDDERLREEFSPYGTISSAKVMKD-DKGNSKGFGFVCFSSPEEATKAVTE 271 Query: 486 MNFDIIKGRPIRIMWSQR 539 MN I+ +P+ + +QR Sbjct: 272 MNGRILISKPLYVALAQR 289 >SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) Length = 382 Score = 93.9 bits (223), Expect = 1e-19 Identities = 48/117 (41%), Positives = 74/117 (63%), Gaps = 1/117 (0%) Frame = +3 Query: 303 ASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 482 A++YVG L ++EA+++E F +GPV+++ + +D IT+ GY +V F DA+ A+ Sbjct: 13 ATIYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGEEDADYAIK 72 Query: 483 SMNFDIIKGRPIRIMWSQRDPSLRKSGVG-NVFIKNLDKTIDNKAMYDTFSAFGNIL 650 MN + G+PIR+ ++ + VG N+FI NLD +D K +YDTFSAFG IL Sbjct: 73 VMNMIKVYGKPIRV--NKASAHNKNLDVGANLFIGNLDTEVDEKLLYDTFSAFGVIL 127 Score = 55.6 bits (128), Expect = 3e-08 Identities = 25/83 (30%), Positives = 52/83 (62%), Gaps = 1/83 (1%) Frame = +3 Query: 303 ASLYVGDLHSDITEAMLFEKFSSAGPVLSI-RVCRDMITRRSLGYAYVNFQQPADAERAL 479 A+L++G+L +++ E +L++ FS+ G +L ++ RD T S G+A++NF ++ A+ Sbjct: 100 ANLFIGNLDTEVDEKLLYDTFSAFGVILQTPKIMRDSDTGNSKGFAFINFASFDASDAAI 159 Query: 480 DSMNFDIIKGRPIRIMWSQRDPS 548 ++MN + RPI + ++ + S Sbjct: 160 EAMNGQYLCNRPITVSYAFKKES 182 >SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) Length = 514 Score = 64.5 bits (150), Expect = 7e-11 Identities = 32/72 (44%), Positives = 46/72 (63%) Frame = +3 Query: 309 LYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSM 488 LYVG LH +ITEAM+ F G V S+++ D T RS GY +V F++ A+RA++ M Sbjct: 244 LYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRAMEQM 303 Query: 489 NFDIIKGRPIRI 524 N + GRP++I Sbjct: 304 NGFELAGRPLKI 315 Score = 37.9 bits (84), Expect = 0.007 Identities = 23/79 (29%), Positives = 39/79 (49%) Frame = +3 Query: 306 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDS 485 +++ L +I L E FS G V +R+ D +RRS G AY+ F + A+ Sbjct: 147 TVFCMQLARNIRPRDLEEFFSKVGQVSDVRIISDRNSRRSKGIAYIEFTDKSAVPLAI-G 205 Query: 486 MNFDIIKGRPIRIMWSQRD 542 ++ + G PI +M +Q + Sbjct: 206 LSGQKLLGAPIMVMLTQAE 224 >SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 389 Score = 63.3 bits (147), Expect = 2e-10 Identities = 32/100 (32%), Positives = 57/100 (57%) Frame = +3 Query: 363 FSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSMNFDIIKGRPIRIMWSQRD 542 F + G V S ++ RD T +SLGYA+VN+ P DA +A+ MN ++ + +++ +++ Sbjct: 47 FGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDANKAVREMNGARLQNKTLKVSFAR-- 104 Query: 543 PSLRKSGVGNVFIKNLDKTIDNKAMYDTFSAFGNILSCKV 662 PS + N++I L K + + + F FG I++ KV Sbjct: 105 PSSTEIKNANLYISGLPKDMKEEEVEALFKPFGKIITSKV 144 >SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1309 Score = 56.0 bits (129), Expect = 3e-08 Identities = 30/123 (24%), Positives = 58/123 (47%), Gaps = 3/123 (2%) Frame = +3 Query: 288 PNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADA 467 P SLYVG+L T+ ++ F+ V+ ++ + Y +V F+ ADA Sbjct: 364 PEEENRSLYVGNLDPKCTQELICSIFNKIAKVVRCKMINSPTDKGP--YCFVEFETHADA 421 Query: 468 ERALDSMNFDIIKGRPIRIMWSQRDPSLRKSGVGN---VFIKNLDKTIDNKAMYDTFSAF 638 + A M+ + + +++ W+ P +++ N +F+ +L + +DN + TF F Sbjct: 422 QEAKFRMDQRTVMDKKLKVNWATNHPGMKRGDTNNHFHIFVGDLAENVDNALLRKTFEPF 481 Query: 639 GNI 647 G I Sbjct: 482 GEI 484 >SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 828 Score = 52.4 bits (120), Expect = 3e-07 Identities = 26/119 (21%), Positives = 61/119 (51%) Frame = +3 Query: 306 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDS 485 +L V + D+T+ F + + + ++ R + S G+ +V++ DA++A+D Sbjct: 48 TLIVNYIPQDMTDQTFRMMFEAVASLNNCKIVRHKPSGWSYGFGFVDYNTTEDAQKAIDK 107 Query: 486 MNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFSAFGNILSCKV 662 +N I + +++ +S+ P + N+++ N+ K + F A+GNI++C++ Sbjct: 108 LNGFTIGNKVLKVAFSR--PGGDNTKGANLYVCNIPKQLPEAEFRKAFEAYGNIVNCRL 164 Score = 42.7 bits (96), Expect = 3e-04 Identities = 25/99 (25%), Positives = 47/99 (47%) Frame = +3 Query: 261 KIFKMNPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAY 440 K+ PG N A+LYV ++ + EA + F + G +++ R+ RD T G + Sbjct: 119 KVAFSRPGGDNTKGANLYVCNIPKQLPEAEFRKAFEAYGNIVNCRLLRDKSTGLPKGCGF 178 Query: 441 VNFQQPADAERALDSMNFDIIKGRPIRIMWSQRDPSLRK 557 V + + A+A+ A+ S++ G + + D + K Sbjct: 179 VLYDKKAEAQAAISSLSGTFFPGSTMGLQIRYADDNSAK 217 >SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) Length = 392 Score = 50.4 bits (115), Expect = 1e-06 Identities = 25/85 (29%), Positives = 46/85 (54%) Frame = +3 Query: 270 KMNPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNF 449 K + G + + S++VG++ + +E L E FS GPV+S R+ D T + GY + + Sbjct: 14 KQSSGAADRSLRSVFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCEY 73 Query: 450 QQPADAERALDSMNFDIIKGRPIRI 524 + A A+ ++N + GR +R+ Sbjct: 74 KDQETALSAMRNLNGYELNGRALRV 98 >SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) Length = 407 Score = 48.4 bits (110), Expect = 5e-06 Identities = 31/80 (38%), Positives = 43/80 (53%) Frame = +3 Query: 306 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDS 485 S+++G+L DI E L E F++ G V S+R+ RD T G+ YV F+ AL Sbjct: 57 SVFIGNLPFDIEEEPLRELFTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDAVVFAL-K 115 Query: 486 MNFDIIKGRPIRIMWSQRDP 545 MN KGR IR+ S+ P Sbjct: 116 MNNAEFKGRKIRVFPSKDKP 135 Score = 28.3 bits (60), Expect = 5.9 Identities = 21/75 (28%), Positives = 39/75 (52%) Frame = +3 Query: 438 YVNFQQPADAERALDSMNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAM 617 YV ++ +A +A+ S N + I G IR+ + D + +VFI NL I+ + + Sbjct: 16 YVVYKAAENANQAIAS-NGEEIDGFHIRVDLASNDKA--HDHQRSVFIGNLPFDIEEEPL 72 Query: 618 YDTFSAFGNILSCKV 662 + F+ GN+ S ++ Sbjct: 73 RELFTTCGNVESVRL 87 >SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) Length = 593 Score = 48.0 bits (109), Expect = 7e-06 Identities = 29/130 (22%), Positives = 57/130 (43%), Gaps = 9/130 (6%) Frame = +3 Query: 300 MASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 479 M +YVG ++ ++ E + F GP+ I + D + + G+A+V + P A+ AL Sbjct: 101 MCRVYVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYDLPEAAQLAL 160 Query: 480 DSMNFDIIKGRPIRIMWSQRDPSL---------RKSGVGNVFIKNLDKTIDNKAMYDTFS 632 + MN ++ GR I++ P ++I ++ + + F Sbjct: 161 EQMNGVLLGGRNIKVGRPSNVPQAAPLIEQFEQEAKKYARIYIASVHPDLLEDDIKSVFE 220 Query: 633 AFGNILSCKV 662 AFG ++ C + Sbjct: 221 AFGKVVHCSL 230 Score = 41.9 bits (94), Expect = 4e-04 Identities = 18/74 (24%), Positives = 39/74 (52%) Frame = +3 Query: 303 ASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 482 A +Y+ +H D+ E + F + G V+ + ++ +T + GY ++ ++ A A+ Sbjct: 199 ARIYIASVHPDLLEDDIKSVFEAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDAIA 258 Query: 483 SMNFDIIKGRPIRI 524 SMN + G+ +R+ Sbjct: 259 SMNLFDLGGQFLRV 272 >SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) Length = 298 Score = 47.6 bits (108), Expect = 9e-06 Identities = 22/71 (30%), Positives = 37/71 (52%) Frame = +3 Query: 312 YVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSMN 491 YVG L ++ E +L F G + +++ D T + G+ +V F+ D A+D+MN Sbjct: 8 YVGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFEFAEDTAAAIDNMN 67 Query: 492 FDIIKGRPIRI 524 + GR IR+ Sbjct: 68 ESELFGRTIRV 78 >SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19) Length = 168 Score = 47.6 bits (108), Expect = 9e-06 Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 1/104 (0%) Frame = +3 Query: 279 PGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQP 458 P PP ++VG + D+ E L F +AGP+ +R+ D ++ GYA+V + Sbjct: 68 PIPPRG--CEVFVGKIPRDLYEDELVPVFETAGPIYEVRLMMD-FNGQNRGYAFVVYTSK 124 Query: 459 ADAERALDSM-NFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKN 587 DA+R + ++ N++I KG+ I + S L +G+ V + N Sbjct: 125 DDAKRCVKTLNNYEIRKGKCIGVCSSVDKSLLVPTGMNGVDLLN 168 >SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18) Length = 209 Score = 47.6 bits (108), Expect = 9e-06 Identities = 29/76 (38%), Positives = 41/76 (53%) Frame = +3 Query: 309 LYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSM 488 L+V L+ T+ L FS G +LS V RD T SL YA++ F++ D ERA M Sbjct: 122 LFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRDQKTGESLQYAFIEFEKDEDCERAYFKM 181 Query: 489 NFDIIKGRPIRIMWSQ 536 + +I R I + +SQ Sbjct: 182 DNVLIDDRRIHVDFSQ 197 >SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21) Length = 304 Score = 46.8 bits (106), Expect = 2e-05 Identities = 23/74 (31%), Positives = 41/74 (55%) Frame = +3 Query: 270 KMNPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNF 449 K + G + A++ V +L + E+ L E F GP+ I + +D T +S G+A++NF Sbjct: 170 KEDDGSGQHETATIRVTNLSEETRESDLQELFRPLGPISRIFLAKDKFTNQSKGFAFINF 229 Query: 450 QQPADAERALDSMN 491 DA RA++ ++ Sbjct: 230 VHREDAARAIEVLS 243 >SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25) Length = 159 Score = 46.0 bits (104), Expect = 3e-05 Identities = 23/75 (30%), Positives = 39/75 (52%) Frame = +3 Query: 312 YVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSMN 491 Y+G+L + E L EKF V+ ++V D T R G+ +V F + E+A+D + Sbjct: 8 YIGNLSYSVDEQALEEKFHGCD-VVDVKVITDRETGRPRGFGFVTFGSKEEMEKAIDEFD 66 Query: 492 FDIIKGRPIRIMWSQ 536 GRP+++ +Q Sbjct: 67 GQDFDGRPMKVNQAQ 81 >SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 550 Score = 46.0 bits (104), Expect = 3e-05 Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 1/85 (1%) Frame = +3 Query: 285 PPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPAD 464 P + + +LYVG L +TE L + F G + SI M+ R++ A+V F A Sbjct: 298 PTDRSITTLYVGGLEGKVTEQDLRDHFYQFGELRSI----SMVPRQNC--AFVCFTSRAA 351 Query: 465 AERALD-SMNFDIIKGRPIRIMWSQ 536 AE A D S N I+KGR ++IMW + Sbjct: 352 AEAAADRSFNKLILKGRRLKIMWGK 376 >SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) Length = 672 Score = 46.0 bits (104), Expect = 3e-05 Identities = 20/61 (32%), Positives = 35/61 (57%) Frame = +3 Query: 309 LYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSM 488 ++ GDL S++T+ L F+ L ++ RD + +S GY +V+F+ P D +A+ M Sbjct: 219 IFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDPNDFIKAMREM 278 Query: 489 N 491 N Sbjct: 279 N 279 >SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 204 Score = 45.2 bits (102), Expect = 5e-05 Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 2/118 (1%) Frame = +3 Query: 267 FKMNPGPPNYP-MASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYV 443 F GPP M SL V +L T L + F G + I + RD T S G+A+V Sbjct: 3 FDSQRGPPEIDGMTSLKVDNLTYRTTVEDLKQVFKKYGDLGDIYIPRDRNTHESRGFAFV 62 Query: 444 NFQQPADAERALDSMNFDIIKGRPIRIMWSQRDPSLRKSGVG-NVFIKNLDKTIDNKA 614 F + DAE A+D M+ + W RD + + +G V + ++ + ++A Sbjct: 63 RFYEKRDAEDAMDCMDATCLMAEKFVFRW--RDMVVPRIPIGRGVLVVMVEVLVTDRA 118 >SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 333 Score = 44.4 bits (100), Expect = 8e-05 Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 4/128 (3%) Frame = +3 Query: 162 KRATWSKECYSHLEKV----KFFIAHILLMST*NCNSKIFKMNPGPPNYPMASLYVGDLH 329 +R T +E HL++ K FI+++L T + K + P + +L+V +L Sbjct: 122 ERQTEEEELPKHLDRSSDPRKVFISNLLFSITEDHLRD--KFSKFPTSLDKHTLFVSNLP 179 Query: 330 SDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSMNFDIIKG 509 D E+ + E FS G V +R+ + + GY YV ++Q + A A+ +++ +KG Sbjct: 180 FDAKESEIEELFSKHGVVKQVRLVTNRAGKPK-GYGYVEYEQESSASTAVLTLDKTEVKG 238 Query: 510 RPIRIMWS 533 R I + S Sbjct: 239 RTISVALS 246 >SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24) Length = 343 Score = 43.6 bits (98), Expect = 1e-04 Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 1/117 (0%) Frame = +3 Query: 306 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDS 485 +++VG LH E+ +FE FS+ G + C ++ +S G+A+V ++ + A++S Sbjct: 43 TIFVGSLHPSTVESTIFEYFSTLGEQVEHVKCIRTLSGKSKGFAFVRLRK----KEAVES 98 Query: 486 MNFDIIKGRPIRIMWSQRDPSLRKSGV-GNVFIKNLDKTIDNKAMYDTFSAFGNILS 653 + GR ++ D S+ K V +KN+ +I + + FS+ G I S Sbjct: 99 -----VLGRDDHVI-DNSDVSMEKQDTYRKVILKNIPSSIGESQILEHFSSSGEIAS 149 >SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 871 Score = 41.9 bits (94), Expect = 4e-04 Identities = 36/151 (23%), Positives = 71/151 (47%), Gaps = 6/151 (3%) Frame = +3 Query: 228 ILLMST*NCNSKIFKMNPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRD 407 I ++T + K ++P PP + L+VG+L + TE + S G + + + R Sbjct: 91 ISFLNTCKYHDKTLNVSPAPPE---SLLFVGNLPFEFTETQFGDLMSPYGNIERLFLVRS 147 Query: 408 MITRRSLGYAYVNF---QQPADAERALDSMNFDIIKGRPIRIMWSQRDPSLRKSGVGN-- 572 +T S GY +V + + A++ L + I GR +R+ +++ + L + V + Sbjct: 148 EVTGDSKGYGFVEYATRENAMQAKQQLLNTASKYIGGRILRVAFAESN-LLTYADVHSRT 206 Query: 573 VFIKNLDKTIDNKAMY-DTFSAFGNILSCKV 662 +F+ L + N + + FS GN+ +V Sbjct: 207 LFVDRLPRDFKNGGLIKELFSQTGNVTFAQV 237 Score = 30.7 bits (66), Expect = 1.1 Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 1/76 (1%) Frame = +3 Query: 306 SLYVGDLHSDITEAMLF-EKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 482 +L+V L D L E FS G V +V + S G+A+V++ +AE+ Sbjct: 206 TLFVDRLPRDFKNGGLIKELFSQTGNVTFAQVAINPANGGSRGFAFVDYATAEEAEKGQR 265 Query: 483 SMNFDIIKGRPIRIMW 530 + N ++G IR+ + Sbjct: 266 AHNGRQVEGSNIRVAY 281 >SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) Length = 1026 Score = 41.9 bits (94), Expect = 4e-04 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 1/85 (1%) Frame = +3 Query: 288 PNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITR-RSLGYAYVNFQQPAD 464 P +++V +L +IT+A F GP+ + +D + R G+ YV F D Sbjct: 15 PVISKTTIFVRNLPYNITDAEFKSAFEEIGPLKRGFIVKDKDNQNRCRGFGYVTFALEED 74 Query: 465 AERALDSMNFDIIKGRPIRIMWSQR 539 A +A D N IKGRPI + +S++ Sbjct: 75 ALKAKD--NIKSIKGRPIHLDFSEK 97 Score = 35.5 bits (78), Expect = 0.039 Identities = 30/137 (21%), Positives = 55/137 (40%), Gaps = 2/137 (1%) Frame = +3 Query: 258 SKIFKMNPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYA 437 SK + P ++ + L + ITE ++++ G V + A Sbjct: 145 SKSKSLRKAPQTDAGRTVILSGLPASITEKQIYKRCRKLGEVEKTIF---PVAGHDSPTA 201 Query: 438 YVNFQQPADAERALDSMNFDIIKGRPIRIMWSQRDPSLRKSGV--GNVFIKNLDKTIDNK 611 + F+ DA +A+ +N +KG ++ + +D S G + I+NL Sbjct: 202 SLLFKSYKDARQAVAKLNGKTLKGVKVKAVIESKDKSSSPKGSKKSRLIIRNLAFNCTEA 261 Query: 612 AMYDTFSAFGNILSCKV 662 + +TFSAFG + V Sbjct: 262 ILKETFSAFGEVSEASV 278 Score = 30.7 bits (66), Expect = 1.1 Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 1/45 (2%) Frame = +3 Query: 531 SQRD-PSLRKSGVGNVFIKNLDKTIDNKAMYDTFSAFGNILSCKV 662 SQR PS K G+ VFI+NL K + + F FG+I CKV Sbjct: 404 SQRSKPSDVKEGL-TVFIRNLSFDSTQKNITNLFKQFGDIAYCKV 447 >SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 364 Score = 40.7 bits (91), Expect = 0.001 Identities = 21/71 (29%), Positives = 40/71 (56%) Frame = +3 Query: 312 YVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSMN 491 Y+G+L + EA L ++FS V+ ++V D T+R G+A+V F + E A++ ++ Sbjct: 233 YIGNLDFKVNEADLQDRFSRY-DVVDVQVISDRETQRPRGFAFVTFGSKKNMEDAINELD 291 Query: 492 FDIIKGRPIRI 524 GR +++ Sbjct: 292 GQEFDGRSMKV 302 Score = 36.7 bits (81), Expect = 0.017 Identities = 17/64 (26%), Positives = 36/64 (56%) Frame = +3 Query: 381 VLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSMNFDIIKGRPIRIMWSQRDPSLRKS 560 +LS++V D T R G+ +V F + ++A+D + + + GRP+++ ++ P + Sbjct: 35 LLSVKVITDRETGRPRGFGFVTFGSEDEMDKAIDKFDGEDLDGRPMKV--NKAQPRGERG 92 Query: 561 GVGN 572 G G+ Sbjct: 93 GGGS 96 >SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) Length = 328 Score = 40.3 bits (90), Expect = 0.001 Identities = 20/61 (32%), Positives = 36/61 (59%) Frame = +3 Query: 300 MASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 479 + L+VG L + T+ L E FS G ++ + + D +T R G+A+V F+ ++A+ A+ Sbjct: 28 IGKLFVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRGFAFVQFKHQSEAD-AI 86 Query: 480 D 482 D Sbjct: 87 D 87 Score = 33.5 bits (73), Expect = 0.16 Identities = 18/81 (22%), Positives = 38/81 (46%), Gaps = 1/81 (1%) Frame = +3 Query: 285 PPNYPMASLYVGDLHSDITEAMLFEKFSSA-GPVLSIRVCRDMITRRSLGYAYVNFQQPA 461 PP+ + ++VG L + ++ + E F A PV I + + R G+ +V+F Sbjct: 97 PPHLRVKKIFVGGLKPETSDEKIREYFGKAYAPVKEIEYITEHSSNRRRGFCFVSFDSED 156 Query: 462 DAERALDSMNFDIIKGRPIRI 524 ++ ++ F I+G + + Sbjct: 157 TVDKICET-QFHNIEGNKVEV 176 >SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 618 Score = 40.3 bits (90), Expect = 0.001 Identities = 29/113 (25%), Positives = 52/113 (46%) Frame = +3 Query: 309 LYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSM 488 L+VG+L D E + E F G V + + ++ G+ ++ AE A + Sbjct: 55 LFVGNL-IDCDEEEMKEMFKKYGEVAEVFINKEK------GFGFIRLDTRLHAEAAKAGL 107 Query: 489 NFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFSAFGNI 647 + KGR +R+ ++ +LR +KNLD + N+ + FS FG++ Sbjct: 108 DMATRKGRTLRVRFATHAAALR--------VKNLDNLVTNELLEQAFSQFGDV 152 >SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28) Length = 419 Score = 39.5 bits (88), Expect = 0.002 Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 2/103 (1%) Frame = +3 Query: 306 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDS 485 +LY+ +L + EAML FS G V+S R+ RD T S G + + E+ + Sbjct: 180 NLYIQNLPQNCDEAMLENMFSKYGKVISTRILRDKDT-NSKGVGFARMESAEKCEQVIKD 238 Query: 486 MNFDIIKG--RPIRIMWSQRDPSLRKSGVGNVFIKNLDKTIDN 608 N ++ G + + + ++ P ++ G + K ++ I N Sbjct: 239 FNKKMLPGCIQELVVKFADGGPK-KRQGQAKRYTKQMEDHIVN 280 >SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) Length = 507 Score = 38.3 bits (85), Expect = 0.006 Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 2/89 (2%) Frame = +3 Query: 309 LYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLG--YAYVNFQQPADAERALD 482 +YVG+L D+ E L + F G + + D+ RR G +A+V F+ P DAE A+ Sbjct: 263 VYVGNLPQDVREKDLHDIFYKYGHIADV----DLKNRRGAGPPFAFVEFEDPRDAEDAVK 318 Query: 483 SMNFDIIKGRPIRIMWSQRDPSLRKSGVG 569 + G IR+ + R S R G G Sbjct: 319 GRDGHEFDGYRIRVEF-PRGGSGRGGGGG 346 >SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) Length = 2386 Score = 37.9 bits (84), Expect = 0.007 Identities = 23/76 (30%), Positives = 40/76 (52%) Frame = +3 Query: 309 LYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSM 488 +++G L D+TE +L E F+ GPV + + RD + +S +V+F AE A M Sbjct: 526 VWIGGLSEDVTENVLLELFNKFGPVKDVVILRDE-SGKSRQSGFVHFWSSDVAEAANVGM 584 Query: 489 NFDIIKGRPIRIMWSQ 536 N I G+ + +++ Sbjct: 585 NGCDILGKIVETKYAK 600 >SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13) Length = 1463 Score = 36.7 bits (81), Expect = 0.017 Identities = 23/77 (29%), Positives = 40/77 (51%) Frame = +3 Query: 303 ASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 482 ++++VG L +T+ L F G + SI D+I R G AY+ ++ DA RALD Sbjct: 541 STIWVGHLAKIVTQDTLQGIFEEHGTITSI----DLIPPR--GCAYIQMEKREDAYRALD 594 Query: 483 SMNFDIIKGRPIRIMWS 533 + + G +++ W+ Sbjct: 595 KLRNIKLYGNSVKLAWA 611 >SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 381 Score = 35.9 bits (79), Expect = 0.029 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 1/87 (1%) Frame = +3 Query: 309 LYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSM 488 +++G + D E L G + R+ D T + G+A+ F + A +A+ ++ Sbjct: 155 VFIGKIPRDCLEDELIPLLEKCGEIREFRLQMDPATGLNKGFAFCTFTEQTSAYQAITTL 214 Query: 489 N-FDIIKGRPIRIMWSQRDPSLRKSGV 566 N DI GR + I S+ + L G+ Sbjct: 215 NDKDIRPGRRLAICKSRSNSRLFVKGI 241 >SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15) Length = 171 Score = 35.9 bits (79), Expect = 0.029 Identities = 22/71 (30%), Positives = 37/71 (52%) Frame = +3 Query: 309 LYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSM 488 +Y+G + E + + F G V IR+ R + RS GYA+V F A+ A D+M Sbjct: 100 IYLGHIPHGFFENEIKKFFEQFGTVNRIRLSRSKKSARSKGYAFVEFACDEVAKIAADTM 159 Query: 489 NFDIIKGRPIR 521 + ++ GR ++ Sbjct: 160 HNYMMFGRLLK 170 >SB_76| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 426 Score = 35.1 bits (77), Expect = 0.051 Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 7/78 (8%) Frame = +3 Query: 312 YVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRS---LGYAYVNFQQPADAERALD 482 +VG+L SD+ + ML +K ++ L I VC + RR+ +A+V+ +D E A+ Sbjct: 13 FVGNLRSDVPKTMLEDKLRASFESLGIFVCSVDVRRRNGKKPTHAFVDLASKSDLENAIT 72 Query: 483 SMN-FD---IIKGRPIRI 524 + + FD + G+ IR+ Sbjct: 73 NADRFDQKLVFDGKIIRV 90 >SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 371 Score = 34.7 bits (76), Expect = 0.068 Identities = 14/35 (40%), Positives = 23/35 (65%) Frame = +3 Query: 420 RSLGYAYVNFQQPADAERALDSMNFDIIKGRPIRI 524 RS G+ +V F P DA+ A+ S+N ++GR ++I Sbjct: 97 RSRGFGFVTFANPEDAQTAVKSLNGKEVQGRTLKI 131 >SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 610 Score = 33.9 bits (74), Expect = 0.12 Identities = 28/124 (22%), Positives = 55/124 (44%), Gaps = 2/124 (1%) Frame = +3 Query: 279 PGPPNYPMAS-LYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQ 455 PG + + S +++G + D E L F G + R+ D I+ + G+A+ F Sbjct: 143 PGTGSEKVCSQVFIGKVPRDCFEDELIPVFEECGHIYDFRLMIDPISGLTKGFAFCTFSN 202 Query: 456 PADAERALDSM-NFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFS 632 +A+ A+ + N +I G+ + + S + L F+ ++ KT + + + FS Sbjct: 203 KDEAQNAVKKLDNKEIRPGKRLGVCISVANSRL--------FVGSIPKTKSKQEILEEFS 254 Query: 633 AFGN 644 N Sbjct: 255 KVTN 258 >SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23) Length = 201 Score = 32.7 bits (71), Expect = 0.27 Identities = 21/75 (28%), Positives = 37/75 (49%) Frame = +3 Query: 309 LYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSM 488 LYVG+L + + L F G R+ + + R G+A+V ++ DAE A+ + Sbjct: 6 LYVGNLGRNADSSELERAFEKFG-----RLSKVWVARNPPGFAFVEYEDYRDAEEAVREL 60 Query: 489 NFDIIKGRPIRIMWS 533 + + R IR+ +S Sbjct: 61 DGANVCDRTIRVEFS 75 >SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 184 Score = 32.3 bits (70), Expect = 0.36 Identities = 22/91 (24%), Positives = 45/91 (49%) Frame = +3 Query: 300 MASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 479 M +Y+G L + ++ + +F GP+ + V R+ G+A+ F DAE A+ Sbjct: 31 MTKVYIGSLGDNASKREIENEFGYYGPLKDVWVARN-----PPGFAFCIFDDRRDAEDAV 85 Query: 480 DSMNFDIIKGRPIRIMWSQRDPSLRKSGVGN 572 ++ I G+ +R+ + + PS + +G+ Sbjct: 86 RELDGRYICGQRVRVELA-KGPSRGRPRMGS 115 >SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07) Length = 252 Score = 32.3 bits (70), Expect = 0.36 Identities = 12/46 (26%), Positives = 25/46 (54%) Frame = +3 Query: 387 SIRVCRDMITRRSLGYAYVNFQQPADAERALDSMNFDIIKGRPIRI 524 ++ + D T R G+ +V F + E+A+D + + GRP+++ Sbjct: 124 AVNIITDRETGRPRGFGFVTFGSKEEMEKAIDEFDGQDLDGRPMKV 169 >SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 558 Score = 32.3 bits (70), Expect = 0.36 Identities = 13/40 (32%), Positives = 22/40 (55%) Frame = +3 Query: 429 GYAYVNFQQPADAERALDSMNFDIIKGRPIRIMWSQRDPS 548 GY +V F++ DA +AL +N I+ R + + W+ S Sbjct: 432 GYCFVEFKKKEDARKALRGLNKKIVLSRALVVDWAHHHKS 471 >SB_45079| Best HMM Match : RRM_1 (HMM E-Value=0.0027) Length = 253 Score = 32.3 bits (70), Expect = 0.36 Identities = 18/59 (30%), Positives = 29/59 (49%) Frame = +3 Query: 342 EAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSMNFDIIKGRPI 518 E + E G + + VC D + +G YV F+ DAE+A++ +N G+PI Sbjct: 85 EDVFLELEEKYGEIEEMNVC-DNLGDHLVGNVYVKFRYEEDAEKAVNDLNNRWYNGQPI 142 >SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18) Length = 291 Score = 31.9 bits (69), Expect = 0.48 Identities = 19/72 (26%), Positives = 35/72 (48%) Frame = +3 Query: 309 LYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSM 488 L+VG + + + L + F+ G + V +D +T++S GY +V AE A + Sbjct: 12 LFVGGIPYESGDDALRKFFAQFGEIREAVVIKDRVTKKSKGYGFVTMATSDAAELACKNK 71 Query: 489 NFDIIKGRPIRI 524 +I+GR + Sbjct: 72 R-PMIEGRQANV 82 >SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 204 Score = 31.9 bits (69), Expect = 0.48 Identities = 17/75 (22%), Positives = 39/75 (52%) Frame = +3 Query: 300 MASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 479 M+ +Y+G++ + ++ + +F + GP+ + + R G+A+ F+ DAE A+ Sbjct: 1 MSRVYIGNIGDNASKREIEREFETFGPLRDV-----WVARNPPGFAFCVFEDRRDAEDAV 55 Query: 480 DSMNFDIIKGRPIRI 524 ++ I G+ R+ Sbjct: 56 RELDGRYICGQRARV 70 >SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11) Length = 248 Score = 31.5 bits (68), Expect = 0.63 Identities = 16/47 (34%), Positives = 24/47 (51%) Frame = +3 Query: 312 YVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQ 452 Y+G+L + E L EKF V+ +RV D T R G+ +V + Sbjct: 85 YIGNLSYSVDEQALEEKFHDCN-VVDVRVITDRETGRPRGFGFVTLE 130 >SB_15485| Best HMM Match : DUF28 (HMM E-Value=9.6) Length = 341 Score = 31.5 bits (68), Expect = 0.63 Identities = 17/42 (40%), Positives = 24/42 (57%) Frame = +3 Query: 255 NSKIFKMNPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGP 380 +S IF PG P+ +Y+GDL S+I E++SS GP Sbjct: 252 DSGIFLHRPGEWKPPLG-VYLGDLTSEIGAGDFTERYSSTGP 292 >SB_46269| Best HMM Match : APG5 (HMM E-Value=8.2) Length = 220 Score = 31.1 bits (67), Expect = 0.84 Identities = 16/42 (38%), Positives = 24/42 (57%) Frame = +3 Query: 255 NSKIFKMNPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGP 380 +S IF PG P+ +Y+GDL S++ E++SS GP Sbjct: 131 DSGIFLHRPGEWKPPLG-VYLGDLTSELEPGDFTERYSSTGP 171 >SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1291 Score = 30.7 bits (66), Expect = 1.1 Identities = 15/61 (24%), Positives = 30/61 (49%) Frame = +3 Query: 309 LYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSM 488 +++G L + + E + E SS G + + + +D T S GYA+ + + A+ + Sbjct: 675 IFIGGLPNYLNEDQVKELLSSFGELRAFNLVKDSATGLSKGYAFCEYVDLGITDVAIQGL 734 Query: 489 N 491 N Sbjct: 735 N 735 >SB_13874| Best HMM Match : YTV (HMM E-Value=5.2) Length = 356 Score = 30.7 bits (66), Expect = 1.1 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = +3 Query: 255 NSKIFKMNPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGP 380 +S IF PG P+ + Y+GDL S++ +++SS GP Sbjct: 220 DSVIFLHRPGEWKPPLGN-YLGDLTSELEPGDFIDRYSSTGP 260 >SB_57035| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 339 Score = 30.3 bits (65), Expect = 1.5 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = +3 Query: 255 NSKIFKMNPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGP 380 +S IF PG P+ Y+GDL S++ +++SS GP Sbjct: 102 DSVIFLHRPGEWKPPLGD-YLGDLTSELEPGDFIDRYSSTGP 142 >SB_51719| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1296 Score = 30.3 bits (65), Expect = 1.5 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = +3 Query: 255 NSKIFKMNPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGP 380 +S IF PG P+ Y+GDL S++ +++SS GP Sbjct: 1172 DSVIFLHRPGAWKPPLGD-YLGDLTSELEPGDFIDRYSSTGP 1212 >SB_35782| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1300 Score = 30.3 bits (65), Expect = 1.5 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = +3 Query: 255 NSKIFKMNPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGP 380 +S IF PG P+ Y+GDL S++ +++SS GP Sbjct: 1226 DSVIFLNRPGEWKPPLGD-YLGDLTSELEPGDFIDRYSSTGP 1266 >SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 414 Score = 30.3 bits (65), Expect = 1.5 Identities = 16/41 (39%), Positives = 21/41 (51%) Frame = +3 Query: 396 VCRDMITRRSLGYAYVNFQQPADAERALDSMNFDIIKGRPI 518 V D TRRS + YV F+ DA A+ M + KG+ I Sbjct: 7 VVYDRETRRSRNFGYVTFRDEQDAADAMKQMGGESGKGKEI 47 >SB_11606| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 816 Score = 30.3 bits (65), Expect = 1.5 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = +3 Query: 255 NSKIFKMNPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGP 380 +S IF PG P+ Y+GDL S++ +++SS GP Sbjct: 680 DSVIFLNGPGEWKPPLGD-YLGDLTSELEPGDFIDRYSSTGP 720 >SB_51729| Best HMM Match : HABP4_PAI-RBP1 (HMM E-Value=1.2) Length = 519 Score = 30.3 bits (65), Expect = 1.5 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = +3 Query: 264 IFKMNPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGP 380 IF PG P+ Y+GDL S++ E++SS GP Sbjct: 388 IFLHRPGEWKPPLGD-YLGDLTSELEPGDFIERYSSTGP 425 >SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) Length = 420 Score = 30.3 bits (65), Expect = 1.5 Identities = 20/73 (27%), Positives = 35/73 (47%) Frame = +3 Query: 306 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDS 485 S++VG L S E L + F G V S+R+ R + S Y +V F+ ++ L Sbjct: 81 SVFVGGLASGTDEEGLKDYFEQFGEVESVRIMRTFL-GYSRNYGFVLFKDDGPSKEVLKK 139 Query: 486 MNFDIIKGRPIRI 524 + +I G+ + + Sbjct: 140 SH--VINGKTVDV 150 >SB_41314| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1388 Score = 30.3 bits (65), Expect = 1.5 Identities = 16/42 (38%), Positives = 24/42 (57%) Frame = +3 Query: 255 NSKIFKMNPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGP 380 +S IF +PG P+ Y+GDL S++ E + +SS GP Sbjct: 1254 DSVIFLHSPGEWMPPLGD-YLGDLTSELDEGDFIDCYSSTGP 1294 >SB_10891| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 929 Score = 30.3 bits (65), Expect = 1.5 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = +3 Query: 255 NSKIFKMNPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGP 380 +S IF PG P+ Y+GDL S++ +++SS GP Sbjct: 793 DSVIFLHRPGEWKPPLGD-YLGDLTSELEPGDFIDRYSSTGP 833 >SB_59346| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 684 Score = 29.9 bits (64), Expect = 1.9 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = +3 Query: 255 NSKIFKMNPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGP 380 +S IF PG P+ Y+GDL S++ E + +SS GP Sbjct: 290 DSVIFLHRPGEWMPPLGD-YLGDLTSELDEGDFIDCYSSTGP 330 >SB_47978| Best HMM Match : W2 (HMM E-Value=4.7) Length = 195 Score = 29.9 bits (64), Expect = 1.9 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = +3 Query: 255 NSKIFKMNPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGP 380 +S IF PG P+ Y+GDL S++ E + +SS GP Sbjct: 14 DSVIFLHRPGEWMPPLGD-YLGDLTSELDEGDFIDCYSSTGP 54 >SB_45111| Best HMM Match : rve (HMM E-Value=1.2e-24) Length = 1575 Score = 29.9 bits (64), Expect = 1.9 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = +3 Query: 255 NSKIFKMNPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGP 380 +S IF PG P+ Y+GDL S++ E + +SS GP Sbjct: 1168 DSVIFLHRPGEWMPPLGD-YLGDLTSELDEGDFIDCYSSTGP 1208 >SB_34804| Best HMM Match : rve (HMM E-Value=1.2e-24) Length = 1725 Score = 29.9 bits (64), Expect = 1.9 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = +3 Query: 255 NSKIFKMNPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGP 380 +S IF PG P+ Y+GDL S++ E + +SS GP Sbjct: 209 DSVIFLHRPGEWMPPLGD-YLGDLTSELDEGDFIDCYSSTGP 249 >SB_30663| Best HMM Match : rve (HMM E-Value=3.3e-25) Length = 346 Score = 29.9 bits (64), Expect = 1.9 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = +3 Query: 255 NSKIFKMNPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGP 380 +S IF PG P+ Y+GDL S++ E + +SS GP Sbjct: 24 DSVIFLHRPGEWMPPLGD-YLGDLTSELDEGDFIDCYSSTGP 64 >SB_16139| Best HMM Match : rve (HMM E-Value=3.6e-21) Length = 889 Score = 29.9 bits (64), Expect = 1.9 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = +3 Query: 255 NSKIFKMNPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGP 380 +S IF PG P+ Y+GDL S++ E + +SS GP Sbjct: 140 DSVIFLHRPGEWMPPLGD-YLGDLTSELDEGDFIDCYSSTGP 180 >SB_48236| Best HMM Match : DNA_pol_B_2 (HMM E-Value=8.6e-09) Length = 1396 Score = 29.9 bits (64), Expect = 1.9 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = +3 Query: 255 NSKIFKMNPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGP 380 +S IF PG P+ Y+GDL S++ +++SS GP Sbjct: 1260 DSIIFLHRPGAWKPPLGD-YLGDLTSELEPGDFIDRYSSTGP 1300 >SB_40318| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 154 Score = 29.9 bits (64), Expect = 1.9 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = +3 Query: 255 NSKIFKMNPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGP 380 +S IF PG P+ Y+GDL S++ +++SS GP Sbjct: 18 DSVIFFNRPGEWKPPLGD-YLGDLTSELEPGDFIDRYSSTGP 58 >SB_38075| Best HMM Match : ELK (HMM E-Value=8.7) Length = 321 Score = 29.9 bits (64), Expect = 1.9 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = +3 Query: 255 NSKIFKMNPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGP 380 +S IF PG P+ Y+GDL S++ E + +SS GP Sbjct: 209 DSVIFLHRPGEWMPPLGD-YLGDLTSELDEGDFIDCYSSTGP 249 >SB_2798| Best HMM Match : DNA_pol_B_2 (HMM E-Value=7.9e-10) Length = 1378 Score = 29.9 bits (64), Expect = 1.9 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = +3 Query: 255 NSKIFKMNPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGP 380 +S IF PG P+ Y+GDL S++ E + +SS GP Sbjct: 1244 DSVIFLHRPGEWMPPLGD-YLGDLTSELDEGDFIDCYSSTGP 1284 >SB_37544| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 856 Score = 29.5 bits (63), Expect = 2.6 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = +3 Query: 255 NSKIFKMNPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGP 380 +S IF PG P+ + Y+GDL S++ +++SS GP Sbjct: 720 DSVIFLHLPGEWKPPLGN-YLGDLTSELEPGDFIDRYSSTGP 760 >SB_37043| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.00036) Length = 1336 Score = 29.5 bits (63), Expect = 2.6 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = +3 Query: 255 NSKIFKMNPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGP 380 +S IF PG P+ ++G+L S++ E + F+S GP Sbjct: 1202 DSVIFTQRPGEWEPPLGD-HLGELTSELAEGDFIDHFASTGP 1242 >SB_43406| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 576 Score = 29.1 bits (62), Expect = 3.4 Identities = 21/72 (29%), Positives = 39/72 (54%) Frame = +3 Query: 336 ITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSMNFDIIKGRP 515 +TE +L E+F+ G V + ++ RS G+ V F A++A+D MN ++ Sbjct: 119 LTEEILKEEFNHLGHVERVNFEKN----RSQGF--VTFDTWEAADKAIDEMNGLKVQHVH 172 Query: 516 IRIMWSQRDPSL 551 IR+ ++R P++ Sbjct: 173 IRVSMARRQPNM 184 >SB_40242| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 161 Score = 29.1 bits (62), Expect = 3.4 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = +3 Query: 264 IFKMNPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGP 380 IF PG P+ Y+GDL S++ +++SS GP Sbjct: 3 IFLHRPGEWKPPLGD-YLGDLTSELEPGDFIDRYSSTGP 40 >SB_29630| Best HMM Match : Sigma54_activat (HMM E-Value=1) Length = 1118 Score = 29.1 bits (62), Expect = 3.4 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = +3 Query: 255 NSKIFKMNPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGP 380 +S IF PG P+ Y+GDL S++ + + +SS GP Sbjct: 442 DSVIFLQRPGEWVPPLGD-YLGDLTSELEQGDFIDCYSSTGP 482 >SB_149| Best HMM Match : rve (HMM E-Value=6.3e-20) Length = 2232 Score = 29.1 bits (62), Expect = 3.4 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = +3 Query: 255 NSKIFKMNPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGP 380 +S IF PG P+ ++GDL S++ E + F+S GP Sbjct: 1168 DSVIFVHRPGEWEPPLGD-HLGDLTSELEEGDYIDHFASTGP 1208 >SB_38097| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1099 Score = 29.1 bits (62), Expect = 3.4 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = +3 Query: 255 NSKIFKMNPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGP 380 +S IF PG P+ Y+GDL S++ +SS GP Sbjct: 966 DSVIFLQRPGEWKPPLGD-YLGDLTSELEPGYFINCYSSTGP 1006 >SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28) Length = 440 Score = 28.7 bits (61), Expect = 4.5 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = +3 Query: 429 GYAYVNFQQPADAERALDSMNFDIIKGRPI 518 GYAYV F++ DA+RA+ ++N G I Sbjct: 37 GYAYVVFKENKDADRAVAALNNSEFHGAKI 66 >SB_42814| Best HMM Match : DNA_pol_B_2 (HMM E-Value=3.4e-09) Length = 924 Score = 28.7 bits (61), Expect = 4.5 Identities = 14/42 (33%), Positives = 24/42 (57%) Frame = +3 Query: 255 NSKIFKMNPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGP 380 +S IF +PG P+ Y+GDL S++ +++S +GP Sbjct: 869 DSVIFLHHPGAWKPPLGD-YLGDLTSELEPGDFIDRYSYSGP 909 >SB_51083| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1232 Score = 28.3 bits (60), Expect = 5.9 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = +3 Query: 255 NSKIFKMNPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGP 380 +S IF PG P+ Y+GDL S++ + +SS GP Sbjct: 1099 DSVIFLQRPGEWMPPLGD-YLGDLTSELGQGDFINCYSSTGP 1139 >SB_52029| Best HMM Match : RRM_1 (HMM E-Value=1e-18) Length = 462 Score = 28.3 bits (60), Expect = 5.9 Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 3/44 (6%) Frame = +3 Query: 540 DPSLRKSG---VGNVFIKNLDKTIDNKAMYDTFSAFGNILSCKV 662 +P ++KS VF+ NLD ++ + + DTF G+++ ++ Sbjct: 173 NPMMKKSNDPAASTVFVTNLDYKVNWQKLKDTFKCAGHVIRAEI 216 >SB_38124| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 776 Score = 28.3 bits (60), Expect = 5.9 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = +3 Query: 252 CNSKIFKMNPGPPNYPMASLYVGDLHS 332 C IFKM P PP+YP + ++ H+ Sbjct: 101 CQPPIFKM-PSPPDYPSSRVFKAQQHT 126 >SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 314 Score = 27.9 bits (59), Expect = 7.8 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 2/49 (4%) Frame = +3 Query: 309 LYVGDLHSDITEAMLFEKFSSAGPV--LSIRVCRDMITRRSLGYAYVNF 449 L++G L + +E + + P L I++ RD T + GY +VNF Sbjct: 106 LFIGGLKDEHSEEDVKTALAPLSPFAPLEIKMVRDRETNKFKGYCFVNF 154 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,856,391 Number of Sequences: 59808 Number of extensions: 312403 Number of successful extensions: 796 Number of sequences better than 10.0: 77 Number of HSP's better than 10.0 without gapping: 746 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 789 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1705624125 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -