Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_M05
(664 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 219 1e-57
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 219 1e-57
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 217 6e-57
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 217 6e-57
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 178 2e-45
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 126 1e-29
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 90 1e-18
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 90 1e-18
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 63 2e-10
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 63 2e-10
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 63 2e-10
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 63 2e-10
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 62 5e-10
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 61 6e-10
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 56 2e-08
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 56 2e-08
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 53 2e-07
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 51 8e-07
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 51 8e-07
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 50 1e-06
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 50 1e-06
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 50 1e-06
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 50 1e-06
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 50 1e-06
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 50 1e-06
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 50 1e-06
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 49 3e-06
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 49 3e-06
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 49 3e-06
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 46 2e-05
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 45 4e-05
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 44 7e-05
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 44 7e-05
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 44 1e-04
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 44 1e-04
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 44 1e-04
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 43 2e-04
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 43 2e-04
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 43 2e-04
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 41 7e-04
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 41 7e-04
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 41 7e-04
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 40 0.002
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 40 0.002
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 40 0.002
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 39 0.004
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 38 0.005
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 37 0.011
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 37 0.011
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 37 0.011
AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical ... 37 0.015
AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical... 36 0.019
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 36 0.026
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 36 0.026
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 36 0.026
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 34 0.078
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 34 0.078
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 34 0.078
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 34 0.078
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 34 0.078
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 34 0.078
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 34 0.078
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 32 0.42
U28928-13|AAL16321.1| 339|Caenorhabditis elegans Hypothetical p... 31 0.55
U28928-12|AAL16320.2| 597|Caenorhabditis elegans Hypothetical p... 31 0.55
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 31 0.73
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 31 0.73
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 30 1.3
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 30 1.7
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z74031-14|CAD66220.1| 187|Caenorhabditis elegans Hypothetical p... 29 2.2
U80455-3|AAO38606.1| 145|Caenorhabditis elegans Elav-type rna b... 29 2.2
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 29 2.2
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 29 2.9
AC006708-8|AAF60429.3| 481|Caenorhabditis elegans Hypothetical ... 28 6.8
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 219 bits (536), Expect = 1e-57
Identities = 100/128 (78%), Positives = 115/128 (89%), Gaps = 2/128 (1%)
Frame = +3
Query: 285 PPN--YPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQP 458
PPN Y MASLY+GDLH D++EAMLFEKFS AGPVLSIRVCRD +R SLGYAYVNFQQP
Sbjct: 49 PPNATYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQP 108
Query: 459 ADAERALDSMNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFSAF 638
ADAERALD+MNF++I GRP+RIMWSQRDP+ R++G GN+FIKNLD+ IDNK++YDTFS F
Sbjct: 109 ADAERALDTMNFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLF 168
Query: 639 GNILSCKV 662
GNILSCKV
Sbjct: 169 GNILSCKV 176
Score = 53.6 bits (123), Expect = 1e-07
Identities = 35/125 (28%), Positives = 65/125 (52%), Gaps = 6/125 (4%)
Frame = +3
Query: 306 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDS 485
++++ +L I +++ FS G +LS +V D S GY +V+F+ A+ A++
Sbjct: 146 NIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDD-EGNSKGYGFVHFETEHSAQTAIEK 204
Query: 486 MNFDIIKGRPIRI----MWSQRDPSLRKSGVG--NVFIKNLDKTIDNKAMYDTFSAFGNI 647
+N ++ + + + +QR L +SG+ NVF+KN + +D + + FS FG I
Sbjct: 205 VNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEI 264
Query: 648 LSCKV 662
S V
Sbjct: 265 TSAVV 269
Score = 51.6 bits (118), Expect = 5e-07
Identities = 29/99 (29%), Positives = 55/99 (55%)
Frame = +3
Query: 294 YPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAER 473
Y +LYV ++ D+ + L + FSS G + S +V D RS G+ +V F++P +A
Sbjct: 340 YQGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCFEKPEEATA 398
Query: 474 ALDSMNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNL 590
A+ MN +I +P+ + +QR R++ + + +++ L
Sbjct: 399 AVTDMNSKMIGAKPLYVALAQRKED-RRAQLASQYMQRL 436
Score = 39.5 bits (88), Expect = 0.002
Identities = 34/146 (23%), Positives = 66/146 (45%), Gaps = 19/146 (13%)
Frame = +3
Query: 282 GPPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPA 461
G +++V + + + L FS G + S V D + G+ +V F
Sbjct: 231 GESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDA-QGKPKGFGFVAFADQD 289
Query: 462 DAERALDSMNFDIIKGRPIRIMW------SQRDPSLRKS-------------GVGNVFIK 584
A +A++ +N I++G ++ S+R L++ GV N+++K
Sbjct: 290 AAGQAVEKLNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGV-NLYVK 348
Query: 585 NLDKTIDNKAMYDTFSAFGNILSCKV 662
N+++ +++ + D FS+FG I S KV
Sbjct: 349 NIEEDLNDDGLRDHFSSFGTITSAKV 374
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 219 bits (536), Expect = 1e-57
Identities = 100/128 (78%), Positives = 115/128 (89%), Gaps = 2/128 (1%)
Frame = +3
Query: 285 PPN--YPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQP 458
PPN Y MASLY+GDLH D++EAMLFEKFS AGPVLSIRVCRD +R SLGYAYVNFQQP
Sbjct: 49 PPNATYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQP 108
Query: 459 ADAERALDSMNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFSAF 638
ADAERALD+MNF++I GRP+RIMWSQRDP+ R++G GN+FIKNLD+ IDNK++YDTFS F
Sbjct: 109 ADAERALDTMNFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLF 168
Query: 639 GNILSCKV 662
GNILSCKV
Sbjct: 169 GNILSCKV 176
Score = 53.6 bits (123), Expect = 1e-07
Identities = 35/125 (28%), Positives = 65/125 (52%), Gaps = 6/125 (4%)
Frame = +3
Query: 306 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDS 485
++++ +L I +++ FS G +LS +V D S GY +V+F+ A+ A++
Sbjct: 146 NIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDD-EGNSKGYGFVHFETEHSAQTAIEK 204
Query: 486 MNFDIIKGRPIRI----MWSQRDPSLRKSGVG--NVFIKNLDKTIDNKAMYDTFSAFGNI 647
+N ++ + + + +QR L +SG+ NVF+KN + +D + + FS FG I
Sbjct: 205 VNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEI 264
Query: 648 LSCKV 662
S V
Sbjct: 265 TSAVV 269
Score = 51.6 bits (118), Expect = 5e-07
Identities = 29/99 (29%), Positives = 55/99 (55%)
Frame = +3
Query: 294 YPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAER 473
Y +LYV ++ D+ + L + FSS G + S +V D RS G+ +V F++P +A
Sbjct: 340 YQGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCFEKPEEATA 398
Query: 474 ALDSMNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNL 590
A+ MN +I +P+ + +QR R++ + + +++ L
Sbjct: 399 AVTDMNSKMIGAKPLYVALAQRKED-RRAQLASQYMQRL 436
Score = 39.5 bits (88), Expect = 0.002
Identities = 34/146 (23%), Positives = 66/146 (45%), Gaps = 19/146 (13%)
Frame = +3
Query: 282 GPPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPA 461
G +++V + + + L FS G + S V D + G+ +V F
Sbjct: 231 GESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDA-QGKPKGFGFVAFADQD 289
Query: 462 DAERALDSMNFDIIKGRPIRIMW------SQRDPSLRKS-------------GVGNVFIK 584
A +A++ +N I++G ++ S+R L++ GV N+++K
Sbjct: 290 AAGQAVEKLNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGV-NLYVK 348
Query: 585 NLDKTIDNKAMYDTFSAFGNILSCKV 662
N+++ +++ + D FS+FG I S KV
Sbjct: 349 NIEEDLNDDGLRDHFSSFGTITSAKV 374
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 217 bits (530), Expect = 6e-57
Identities = 96/124 (77%), Positives = 113/124 (91%)
Frame = +3
Query: 291 NYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAE 470
+Y MASLYVGDLH D+ E++LFEKFS+AGPVLSIRVCRD TR SLGYAYVNFQQPADAE
Sbjct: 28 SYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAE 87
Query: 471 RALDSMNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFSAFGNIL 650
RA+D+MNF+ + G+P+RIMWSQRDP++R+SG GN+FIKNLDK IDNK++YDTFS FGNIL
Sbjct: 88 RAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNIL 147
Query: 651 SCKV 662
SCKV
Sbjct: 148 SCKV 151
Score = 52.8 bits (121), Expect = 2e-07
Identities = 33/125 (26%), Positives = 65/125 (52%), Gaps = 6/125 (4%)
Frame = +3
Query: 306 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDS 485
++++ +L I +++ FS G +LS +V D S GY +V+F+ A+ A+
Sbjct: 121 NIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFETEEAAQNAIQK 179
Query: 486 MNFDIIKGRPIRI----MWSQRDPSLRKSG--VGNVFIKNLDKTIDNKAMYDTFSAFGNI 647
+N ++ G+ + + +QR+ L ++ NV++KN + + + F+ FGNI
Sbjct: 180 VNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKVFAKFGNI 239
Query: 648 LSCKV 662
SC+V
Sbjct: 240 TSCEV 244
Score = 49.6 bits (113), Expect = 2e-06
Identities = 37/138 (26%), Positives = 68/138 (49%), Gaps = 19/138 (13%)
Frame = +3
Query: 306 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDS 485
++YV + + L + F+ G + S V + +S G+ +V F P +AE A+ +
Sbjct: 214 NVYVKNFGDHYNKETLEKVFAKFGNITSCEVMT--VEGKSKGFGFVAFANPEEAETAVQA 271
Query: 486 MNFDIIKGRPIRI------MWSQRDPSLRKS-------------GVGNVFIKNLDKTIDN 608
++ I+G +++ S+R L+K GV N+++KNLD+T+D+
Sbjct: 272 LHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGV-NLYVKNLDETVDD 330
Query: 609 KAMYDTFSAFGNILSCKV 662
+ F ++GNI S KV
Sbjct: 331 DGLKKQFESYGNITSAKV 348
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 217 bits (530), Expect = 6e-57
Identities = 96/124 (77%), Positives = 113/124 (91%)
Frame = +3
Query: 291 NYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAE 470
+Y MASLYVGDLH D+ E++LFEKFS+AGPVLSIRVCRD TR SLGYAYVNFQQPADAE
Sbjct: 28 SYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAE 87
Query: 471 RALDSMNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFSAFGNIL 650
RA+D+MNF+ + G+P+RIMWSQRDP++R+SG GN+FIKNLDK IDNK++YDTFS FGNIL
Sbjct: 88 RAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNIL 147
Query: 651 SCKV 662
SCKV
Sbjct: 148 SCKV 151
Score = 52.4 bits (120), Expect = 3e-07
Identities = 33/125 (26%), Positives = 65/125 (52%), Gaps = 6/125 (4%)
Frame = +3
Query: 306 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDS 485
++++ +L I +++ FS G +LS +V D S GY +V+F+ A+ A+
Sbjct: 121 NIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFETEEAAQNAIQK 179
Query: 486 MNFDIIKGRPIRI----MWSQRDPSLRKSG--VGNVFIKNLDKTIDNKAMYDTFSAFGNI 647
+N ++ G+ + + +QR+ L ++ NV++KN + + + F+ FGNI
Sbjct: 180 VNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNI 239
Query: 648 LSCKV 662
SC+V
Sbjct: 240 TSCEV 244
Score = 50.0 bits (114), Expect = 1e-06
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 19/134 (14%)
Frame = +3
Query: 318 GDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSMNFD 497
GD ++ T LF KF G + S V + +S G+ +V F P +AE A+ +++
Sbjct: 221 GDHYNKETLEKLFAKF---GNITSCEVMT--VEGKSKGFGFVAFANPEEAETAVQALHDS 275
Query: 498 IIKGRPIRI------MWSQRDPSLRKS-------------GVGNVFIKNLDKTIDNKAMY 620
I+G +++ S+R L+K GV N+++KNLD+T+D+ +
Sbjct: 276 TIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGV-NLYVKNLDETVDDDGLK 334
Query: 621 DTFSAFGNILSCKV 662
F ++GNI S KV
Sbjct: 335 KQFESYGNITSAKV 348
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 178 bits (434), Expect = 2e-45
Identities = 79/107 (73%), Positives = 94/107 (87%)
Frame = +3
Query: 291 NYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAE 470
+Y MASLYVGDLH D+ E++LFEKFS+AGPVLSIRVCRD TR SLGYAYVNFQQPADAE
Sbjct: 28 SYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAE 87
Query: 471 RALDSMNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKTIDNK 611
RA+D+MNF+ + G+P+RIMWSQRDP++R+SG GN+FIKNLDK K
Sbjct: 88 RAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVFVGK 134
Score = 50.0 bits (114), Expect = 1e-06
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 19/134 (14%)
Frame = +3
Query: 318 GDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSMNFD 497
GD ++ T LF KF G + S V + +S G+ +V F P +AE A+ +++
Sbjct: 161 GDHYNKETLEKLFAKF---GNITSCEVMT--VEGKSKGFGFVAFANPEEAETAVQALHDS 215
Query: 498 IIKGRPIRI------MWSQRDPSLRKS-------------GVGNVFIKNLDKTIDNKAMY 620
I+G +++ S+R L+K GV N+++KNLD+T+D+ +
Sbjct: 216 TIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGV-NLYVKNLDETVDDDGLK 274
Query: 621 DTFSAFGNILSCKV 662
F ++GNI S KV
Sbjct: 275 KQFESYGNITSAKV 288
Score = 31.1 bits (67), Expect = 0.73
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 570 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKV 662
NV++KN + + + F+ FGNI SC+V
Sbjct: 154 NVYVKNFGDHYNKETLEKLFAKFGNITSCEV 184
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 126 bits (305), Expect = 1e-29
Identities = 53/70 (75%), Positives = 65/70 (92%)
Frame = +3
Query: 453 QPADAERALDSMNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFS 632
QPADAERA+D+MNF+ + G+P+RIMWSQRDP++R+SG GN+FIKNLDK IDNK++YDTFS
Sbjct: 19 QPADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFS 78
Query: 633 AFGNILSCKV 662
FGNILSCKV
Sbjct: 79 LFGNILSCKV 88
Score = 52.4 bits (120), Expect = 3e-07
Identities = 33/125 (26%), Positives = 65/125 (52%), Gaps = 6/125 (4%)
Frame = +3
Query: 306 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDS 485
++++ +L I +++ FS G +LS +V D S GY +V+F+ A+ A+
Sbjct: 58 NIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFETEEAAQNAIQK 116
Query: 486 MNFDIIKGRPIRI----MWSQRDPSLRKSG--VGNVFIKNLDKTIDNKAMYDTFSAFGNI 647
+N ++ G+ + + +QR+ L ++ NV++KN + + + F+ FGNI
Sbjct: 117 VNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNI 176
Query: 648 LSCKV 662
SC+V
Sbjct: 177 TSCEV 181
Score = 50.0 bits (114), Expect = 1e-06
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 19/134 (14%)
Frame = +3
Query: 318 GDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSMNFD 497
GD ++ T LF KF G + S V + +S G+ +V F P +AE A+ +++
Sbjct: 158 GDHYNKETLEKLFAKF---GNITSCEVMT--VEGKSKGFGFVAFANPEEAETAVQALHDS 212
Query: 498 IIKGRPIRI------MWSQRDPSLRKS-------------GVGNVFIKNLDKTIDNKAMY 620
I+G +++ S+R L+K GV N+++KNLD+T+D+ +
Sbjct: 213 TIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGV-NLYVKNLDETVDDDGLK 271
Query: 621 DTFSAFGNILSCKV 662
F ++GNI S KV
Sbjct: 272 KQFESYGNITSAKV 285
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 89.8 bits (213), Expect = 1e-18
Identities = 44/117 (37%), Positives = 72/117 (61%), Gaps = 1/117 (0%)
Frame = +3
Query: 303 ASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 482
A++YVG L ++E++L+E AGPV+S+ + +D +T G+ +V F DA+ A+
Sbjct: 13 ATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIK 72
Query: 483 SMNFDIIKGRPIRIMWSQRDPSLRKSGVG-NVFIKNLDKTIDNKAMYDTFSAFGNIL 650
+N + G+PI++ ++ + VG N+F+ NLD +D K +YDTFSAFG IL
Sbjct: 73 ILNMIKLYGKPIKV--NKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVIL 127
Score = 54.0 bits (124), Expect = 9e-08
Identities = 26/89 (29%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Frame = +3
Query: 303 ASLYVGDLHSDITEAMLFEKFSSAGPVLSI-RVCRDMITRRSLGYAYVNFQQPADAERAL 479
A+++VG+L ++ E +L++ FS+ G +L + ++ RD+ + S G+A++NF ++ AL
Sbjct: 100 ANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTAL 159
Query: 480 DSMNFDIIKGRPIRIMWS-QRDPSLRKSG 563
++MN + R I + ++ +RD + G
Sbjct: 160 EAMNGQFLCNRAITVSYAFKRDSKGERHG 188
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 89.8 bits (213), Expect = 1e-18
Identities = 44/117 (37%), Positives = 72/117 (61%), Gaps = 1/117 (0%)
Frame = +3
Query: 303 ASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 482
A++YVG L ++E++L+E AGPV+S+ + +D +T G+ +V F DA+ A+
Sbjct: 23 ATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIK 82
Query: 483 SMNFDIIKGRPIRIMWSQRDPSLRKSGVG-NVFIKNLDKTIDNKAMYDTFSAFGNIL 650
+N + G+PI++ ++ + VG N+F+ NLD +D K +YDTFSAFG IL
Sbjct: 83 ILNMIKLYGKPIKV--NKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVIL 137
Score = 54.0 bits (124), Expect = 9e-08
Identities = 26/89 (29%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Frame = +3
Query: 303 ASLYVGDLHSDITEAMLFEKFSSAGPVLSI-RVCRDMITRRSLGYAYVNFQQPADAERAL 479
A+++VG+L ++ E +L++ FS+ G +L + ++ RD+ + S G+A++NF ++ AL
Sbjct: 110 ANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTAL 169
Query: 480 DSMNFDIIKGRPIRIMWS-QRDPSLRKSG 563
++MN + R I + ++ +RD + G
Sbjct: 170 EAMNGQFLCNRAITVSYAFKRDSKGERHG 198
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 62.9 bits (146), Expect = 2e-10
Identities = 40/116 (34%), Positives = 62/116 (53%), Gaps = 1/116 (0%)
Frame = +3
Query: 309 LYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSM 488
++VGDL S++ L E F G V +V RD T +S GY +V++ + +AERA++ M
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 83
Query: 489 NFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFSAF-GNILS 653
N + R IR W+ R P ++ + K+ D+ I N+ D S + GNI S
Sbjct: 84 NGQWLGRRTIRTNWATRKPGDQEK-PSHYNEKSYDE-IYNQTSGDNTSVYVGNIAS 137
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/77 (29%), Positives = 41/77 (53%)
Frame = +3
Query: 306 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDS 485
S+YVG++ S +TE + + F+S G + +R+ + GYA+V F A +A+
Sbjct: 129 SVYVGNIAS-LTEDEIRQGFASFGRITEVRIFKMQ------GYAFVKFDNKDAAAKAIVQ 181
Query: 486 MNFDIIKGRPIRIMWSQ 536
MN + G+ +R W +
Sbjct: 182 MNNQDVGGQLVRCSWGK 198
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +3
Query: 570 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKV 662
+VF+ +L +DN+ + + F FG++ KV
Sbjct: 23 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKV 53
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 62.9 bits (146), Expect = 2e-10
Identities = 40/116 (34%), Positives = 62/116 (53%), Gaps = 1/116 (0%)
Frame = +3
Query: 309 LYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSM 488
++VGDL S++ L E F G V +V RD T +S GY +V++ + +AERA++ M
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 93
Query: 489 NFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFSAF-GNILS 653
N + R IR W+ R P ++ + K+ D+ I N+ D S + GNI S
Sbjct: 94 NGQWLGRRTIRTNWATRKPGDQEK-PSHYNEKSYDE-IYNQTSGDNTSVYVGNIAS 147
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/77 (29%), Positives = 41/77 (53%)
Frame = +3
Query: 306 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDS 485
S+YVG++ S +TE + + F+S G + +R+ + GYA+V F A +A+
Sbjct: 139 SVYVGNIAS-LTEDEIRQGFASFGRITEVRIFKMQ------GYAFVKFDNKDAAAKAIVQ 191
Query: 486 MNFDIIKGRPIRIMWSQ 536
MN + G+ +R W +
Sbjct: 192 MNNQDVGGQLVRCSWGK 208
Score = 31.9 bits (69), Expect = 0.42
Identities = 16/64 (25%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Frame = +3
Query: 486 MNFDIIKGRPIRIMWSQRDPSLRKSGVG-----NVFIKNLDKTIDNKAMYDTFSAFGNIL 650
MN ++ R +++ W+ +P ++S + +VF+ +L +DN+ + + F FG++
Sbjct: 1 MNKRLLLDREMKVNWAV-EPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVS 59
Query: 651 SCKV 662
KV
Sbjct: 60 DAKV 63
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 62.9 bits (146), Expect = 2e-10
Identities = 40/116 (34%), Positives = 62/116 (53%), Gaps = 1/116 (0%)
Frame = +3
Query: 309 LYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSM 488
++VGDL S++ L E F G V +V RD T +S GY +V++ + +AERA++ M
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 196
Query: 489 NFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFSAF-GNILS 653
N + R IR W+ R P ++ + K+ D+ I N+ D S + GNI S
Sbjct: 197 NGQWLGRRTIRTNWATRKPGDQEK-PSHYNEKSYDE-IYNQTSGDNTSVYVGNIAS 250
Score = 60.5 bits (140), Expect = 1e-09
Identities = 36/124 (29%), Positives = 65/124 (52%), Gaps = 5/124 (4%)
Frame = +3
Query: 306 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDS 485
+LYVG+L S +TE + F+ G V +V D + YA+V F A +AL +
Sbjct: 47 TLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD---GSNDPYAFVEFSDHGQASQALQT 103
Query: 486 MNFDIIKGRPIRIMWSQRDPSLRKSGVG-----NVFIKNLDKTIDNKAMYDTFSAFGNIL 650
MN ++ R +++ W+ +P ++S + +VF+ +L +DN+ + + F FG++
Sbjct: 104 MNKRLLLDREMKVNWAV-EPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVS 162
Query: 651 SCKV 662
KV
Sbjct: 163 DAKV 166
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/77 (29%), Positives = 41/77 (53%)
Frame = +3
Query: 306 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDS 485
S+YVG++ S +TE + + F+S G + +R+ + GYA+V F A +A+
Sbjct: 242 SVYVGNIAS-LTEDEIRQGFASFGRITEVRIFKMQ------GYAFVKFDNKDAAAKAIVQ 294
Query: 486 MNFDIIKGRPIRIMWSQ 536
MN + G+ +R W +
Sbjct: 295 MNNQDVGGQLVRCSWGK 311
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 62.9 bits (146), Expect = 2e-10
Identities = 40/116 (34%), Positives = 62/116 (53%), Gaps = 1/116 (0%)
Frame = +3
Query: 309 LYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSM 488
++VGDL S++ L E F G V +V RD T +S GY +V++ + +AERA++ M
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 164
Query: 489 NFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFSAF-GNILS 653
N + R IR W+ R P ++ + K+ D+ I N+ D S + GNI S
Sbjct: 165 NGQWLGRRTIRTNWATRKPGDQEK-PSHYNEKSYDE-IYNQTSGDNTSVYVGNIAS 218
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/77 (29%), Positives = 41/77 (53%)
Frame = +3
Query: 306 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDS 485
S+YVG++ S +TE + + F+S G + +R+ + GYA+V F A +A+
Sbjct: 210 SVYVGNIAS-LTEDEIRQGFASFGRITEVRIFKMQ------GYAFVKFDNKDAAAKAIVQ 262
Query: 486 MNFDIIKGRPIRIMWSQ 536
MN + G+ +R W +
Sbjct: 263 MNNQDVGGQLVRCSWGK 279
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +3
Query: 570 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKV 662
+VF+ +L +DN+ + + F FG++ KV
Sbjct: 104 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKV 134
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 306 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRD 407
+LYVG+L S +TE + F+ G V +V D
Sbjct: 47 TLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD 80
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 61.7 bits (143), Expect = 5e-10
Identities = 31/79 (39%), Positives = 44/79 (55%)
Frame = +3
Query: 309 LYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSM 488
++VGDL S+I L E F G V ++ RD T + GY +V++ + DAERA+D M
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEM 193
Query: 489 NFDIIKGRPIRIMWSQRDP 545
N + R IR W+ R P
Sbjct: 194 NGAWLGRRTIRTNWATRKP 212
Score = 40.3 bits (90), Expect = 0.001
Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 7/126 (5%)
Frame = +3
Query: 306 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDS 485
+L+V +L IT+ L F+ G V+ ++ + + YA+V F A AL S
Sbjct: 41 TLFVANLDPAITDEFLATLFNQIGAVMKAKIIFEGLNDP---YAFVEFSDHNQATLALQS 97
Query: 486 MNFDIIKGRPIRIMWS--QRDPSLRKSGVG-----NVFIKNLDKTIDNKAMYDTFSAFGN 644
N + + + + W+ R+P +S +VF+ +L ID+ + + F FG
Sbjct: 98 HNGRELLEKEMHVTWAFEPREPGENRSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGE 157
Query: 645 ILSCKV 662
+ K+
Sbjct: 158 VSEAKI 163
Score = 40.3 bits (90), Expect = 0.001
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Frame = +3
Query: 306 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDS 485
S+YVG++ +++ E + F GP+ +R T + GYA+V F+ A RA+
Sbjct: 257 SVYVGNI-ANLGEDEIRRAFDRFGPINEVR------TFKIQGYAFVKFETKESAARAIVQ 309
Query: 486 MNFDIIKGRPIRIMWSQR----DPSLRKSGVG 569
MN I G+ +R W + PS R SG G
Sbjct: 310 MNNADIGGQIVRCSWGKSGDSGKPSERGSGGG 341
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 61.3 bits (142), Expect = 6e-10
Identities = 37/132 (28%), Positives = 65/132 (49%), Gaps = 14/132 (10%)
Frame = +3
Query: 309 LYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSM 488
++VGDL D++ +L F+ G V +V RD+ T++S GY +V+F +AE A+ M
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGM 196
Query: 489 NFDIIKGRPIRIMWSQRDPS--------------LRKSGVGNVFIKNLDKTIDNKAMYDT 626
N I R +R W+ R S K+ +V++ N+ + + + D
Sbjct: 197 NGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTDADLRDL 256
Query: 627 FSAFGNILSCKV 662
FS +G+I ++
Sbjct: 257 FSTYGDIAEVRI 268
Score = 41.9 bits (94), Expect = 4e-04
Identities = 23/77 (29%), Positives = 43/77 (55%)
Frame = +3
Query: 306 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDS 485
S+YVG++ T+A L + FS+ G + +R+ + T+R YA+V +++ A +A+
Sbjct: 238 SVYVGNISQQTTDADLRDLFSTYGDIAEVRIFK---TQR---YAFVRYEKKECATKAIME 291
Query: 486 MNFDIIKGRPIRIMWSQ 536
MN + G +R W +
Sbjct: 292 MNGKEMAGNQVRCSWGR 308
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 570 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKV 662
+VF+ +L K + N+ + TF+ FG + KV
Sbjct: 136 HVFVGDLSKDVSNELLKSTFTKFGEVSEAKV 166
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 59.7 bits (138), Expect = 2e-09
Identities = 31/119 (26%), Positives = 66/119 (55%)
Frame = +3
Query: 306 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDS 485
+L + L +T+ + F+S G + S ++ RD +T +SLGY +VN+ + DA RA+ S
Sbjct: 43 NLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSS 102
Query: 486 MNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFSAFGNILSCKV 662
N ++ + I++ +++ PS + N+++ + K++ + F FG I++ ++
Sbjct: 103 FNGLRLQNKTIKVSYAR--PSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRI 159
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/79 (27%), Positives = 49/79 (62%)
Frame = +3
Query: 309 LYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSM 488
L+V +L SD + +L++ FS G ++++++ RD+ T++ GYA+V+ +A A+ S+
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDL-TQQCKGYAFVSMSNYTEAYNAMLSL 434
Query: 489 NFDIIKGRPIRIMWSQRDP 545
N + G+ +++++ P
Sbjct: 435 NGTNLAGKTLQVVFKSSTP 453
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 56.0 bits (129), Expect = 2e-08
Identities = 27/73 (36%), Positives = 42/73 (57%)
Frame = +3
Query: 306 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDS 485
S+YVG+ TE L FSS G + ++R+ D T R G+A++ F + A+RA++
Sbjct: 6 SVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQ 65
Query: 486 MNFDIIKGRPIRI 524
MN GRP+R+
Sbjct: 66 MNGAEFNGRPLRV 78
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 56.0 bits (129), Expect = 2e-08
Identities = 29/96 (30%), Positives = 50/96 (52%)
Frame = +3
Query: 273 MNPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQ 452
MN P+ +LYVG D+TE +L F G V++I + D + + G+ +V F
Sbjct: 1 MNTNFPHNRKRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFD 60
Query: 453 QPADAERALDSMNFDIIKGRPIRIMWSQRDPSLRKS 560
DA A+D+MN + G+ IR+ +++ + +S
Sbjct: 61 MAEDAAMAIDNMNESELFGKTIRVNFARPPKATERS 96
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/119 (23%), Positives = 58/119 (48%)
Frame = +3
Query: 306 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDS 485
+LY+ L + + +L E S G + S + D T GY +V+F+ P A A+D
Sbjct: 108 NLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVDG 167
Query: 486 MNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFSAFGNILSCKV 662
+N + ++ + ++ ++DP+ N++I NL + + + FG ++S ++
Sbjct: 168 LNTEGVQAQMAKLQQQEQDPT-------NLYIANLPLDFTEQMLETELNKFGMVISTRI 219
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/119 (23%), Positives = 58/119 (48%)
Frame = +3
Query: 306 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDS 485
+LY+ L + + +L E S G + S + D T GY +V+F+ P A A+D
Sbjct: 82 NLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVDG 141
Query: 486 MNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFSAFGNILSCKV 662
+N + ++ + ++ ++DP+ N++I NL + + + FG ++S ++
Sbjct: 142 LNTEGVQAQMAKLQQQEQDPT-------NLYIANLPLDFTEQMLETELNKFGMVISTRI 193
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 50.8 bits (116), Expect = 8e-07
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +3
Query: 300 MASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 479
+ SL + +L T L F G + + + RD +R+S G+ +V F + DAE AL
Sbjct: 18 LTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHAL 77
Query: 480 DSMNFDIIKGRPIRIMWSQRD-PSLRKSGVG 569
D + ++ GR +R+ ++ D PS + G G
Sbjct: 78 DRTDGKLVDGRELRVTLAKYDRPSDERGGRG 108
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 50.8 bits (116), Expect = 8e-07
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +3
Query: 300 MASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 479
+ SL + +L T L F G + + + RD +R+S G+ +V F + DAE AL
Sbjct: 18 LTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHAL 77
Query: 480 DSMNFDIIKGRPIRIMWSQRD-PSLRKSGVG 569
D + ++ GR +R+ ++ D PS + G G
Sbjct: 78 DRTDGKLVDGRELRVTLAKYDRPSDERGGRG 108
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/73 (34%), Positives = 43/73 (58%)
Frame = +3
Query: 306 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDS 485
S++VG++ D++E + FS AG VLSI++ D T + GY ++ F AE A+ +
Sbjct: 19 SVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRN 78
Query: 486 MNFDIIKGRPIRI 524
+N + GR +R+
Sbjct: 79 LNGYELSGRILRV 91
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 6/43 (13%)
Frame = +3
Query: 552 RKSGVGN------VFIKNLDKTIDNKAMYDTFSAFGNILSCKV 662
+ SGVGN VF+ N+ + + FS GN+LS K+
Sbjct: 7 KSSGVGNDRSQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKM 49
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 50.0 bits (114), Expect = 1e-06
Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 1/130 (0%)
Frame = +3
Query: 276 NPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQ 455
+P P+ ++VG + E F G V S + RD T+ S G +V F
Sbjct: 46 SPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYH 105
Query: 456 PADAERALDSM-NFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFS 632
DA A ++ N +I+G + D R +FI L K + + + + F+
Sbjct: 106 RKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFA 163
Query: 633 AFGNILSCKV 662
FG+I C V
Sbjct: 164 KFGHIEDCSV 173
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 570 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKV 662
N+FI +L + + + +TF+ FG ILS KV
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKV 530
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 50.0 bits (114), Expect = 1e-06
Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 1/130 (0%)
Frame = +3
Query: 276 NPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQ 455
+P P+ ++VG + E F G V S + RD T+ S G +V F
Sbjct: 46 SPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYH 105
Query: 456 PADAERALDSM-NFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFS 632
DA A ++ N +I+G + D R +FI L K + + + + F+
Sbjct: 106 RKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFA 163
Query: 633 AFGNILSCKV 662
FG+I C V
Sbjct: 164 KFGHIEDCSV 173
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 570 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKV 662
N+FI +L + + + +TF+ FG ILS KV
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKV 530
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 50.0 bits (114), Expect = 1e-06
Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 1/130 (0%)
Frame = +3
Query: 276 NPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQ 455
+P P+ ++VG + E F G V S + RD T+ S G +V F
Sbjct: 46 SPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYH 105
Query: 456 PADAERALDSM-NFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFS 632
DA A ++ N +I+G + D R +FI L K + + + + F+
Sbjct: 106 RKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFA 163
Query: 633 AFGNILSCKV 662
FG+I C V
Sbjct: 164 KFGHIEDCSV 173
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 570 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKV 662
N+FI +L + + + +TF+ FG ILS KV
Sbjct: 429 NLFIYHLPQDFGDSDLINTFAPFGGILSAKV 459
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 50.0 bits (114), Expect = 1e-06
Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 1/130 (0%)
Frame = +3
Query: 276 NPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQ 455
+P P+ ++VG + E F G V S + RD T+ S G +V F
Sbjct: 46 SPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYH 105
Query: 456 PADAERALDSM-NFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFS 632
DA A ++ N +I+G + D R +FI L K + + + + F+
Sbjct: 106 RKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFA 163
Query: 633 AFGNILSCKV 662
FG+I C V
Sbjct: 164 KFGHIEDCSV 173
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 50.0 bits (114), Expect = 1e-06
Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 1/130 (0%)
Frame = +3
Query: 276 NPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQ 455
+P P+ ++VG + E F G V S + RD T+ S G +V F
Sbjct: 46 SPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYH 105
Query: 456 PADAERALDSM-NFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFS 632
DA A ++ N +I+G + D R +FI L K + + + + F+
Sbjct: 106 RKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFA 163
Query: 633 AFGNILSCKV 662
FG+I C V
Sbjct: 164 KFGHIEDCSV 173
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 50.0 bits (114), Expect = 1e-06
Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 1/130 (0%)
Frame = +3
Query: 276 NPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQ 455
+P P+ ++VG + E F G V S + RD T+ S G +V F
Sbjct: 46 SPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYH 105
Query: 456 PADAERALDSM-NFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFS 632
DA A ++ N +I+G + D R +FI L K + + + + F+
Sbjct: 106 RKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFA 163
Query: 633 AFGNILSCKV 662
FG+I C V
Sbjct: 164 KFGHIEDCSV 173
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 50.0 bits (114), Expect = 1e-06
Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 1/130 (0%)
Frame = +3
Query: 276 NPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQ 455
+P P+ ++VG + E F G V S + RD T+ S G +V F
Sbjct: 46 SPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYH 105
Query: 456 PADAERALDSM-NFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFS 632
DA A ++ N +I+G + D R +FI L K + + + + F+
Sbjct: 106 RKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFA 163
Query: 633 AFGNILSCKV 662
FG+I C V
Sbjct: 164 KFGHIEDCSV 173
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 570 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKV 662
N+FI +L + + + +TF+ FG ILS KV
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKV 530
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 49.6 bits (113), Expect = 2e-06
Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +3
Query: 306 SLYVGDLHSDITEAMLFEKFSSA-GPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 482
+++VG+L +ITE L FS+ GPV ++R+ RD T + G+A+VNF+Q + AL
Sbjct: 247 AIFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVSLAL- 305
Query: 483 SMNFDIIKGRPIRI 524
SM ++ R +RI
Sbjct: 306 SMETIKMEKRDLRI 319
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 49.2 bits (112), Expect = 3e-06
Identities = 25/75 (33%), Positives = 41/75 (54%)
Frame = +3
Query: 300 MASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 479
M+ +YVG + +I E ML F GP+ SI + D T +A+V ++ P A A
Sbjct: 101 MSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQ 160
Query: 480 DSMNFDIIKGRPIRI 524
+SMN ++ GR +++
Sbjct: 161 ESMNGQMLGGRNLKV 175
Score = 37.1 bits (82), Expect = 0.011
Identities = 18/71 (25%), Positives = 33/71 (46%)
Frame = +3
Query: 309 LYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSM 488
+YV +H D++E L F + G ++ ++ R R G+ Y+ F A+ M
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGM 268
Query: 489 NFDIIKGRPIR 521
N + G+ +R
Sbjct: 269 NMFDLGGQYLR 279
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 49.2 bits (112), Expect = 3e-06
Identities = 25/75 (33%), Positives = 41/75 (54%)
Frame = +3
Query: 300 MASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 479
M+ +YVG + +I E ML F GP+ SI + D T +A+V ++ P A A
Sbjct: 101 MSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQ 160
Query: 480 DSMNFDIIKGRPIRI 524
+SMN ++ GR +++
Sbjct: 161 ESMNGQMLGGRNLKV 175
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/72 (25%), Positives = 34/72 (47%)
Frame = +3
Query: 309 LYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSM 488
+YV +H D++E L F + G ++ ++ R R G+ Y+ F A+ M
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGM 268
Query: 489 NFDIIKGRPIRI 524
N + G+ +R+
Sbjct: 269 NMFDLGGQYLRV 280
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 49.2 bits (112), Expect = 3e-06
Identities = 25/75 (33%), Positives = 41/75 (54%)
Frame = +3
Query: 300 MASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 479
M+ +YVG + +I E ML F GP+ SI + D T +A+V ++ P A A
Sbjct: 101 MSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQ 160
Query: 480 DSMNFDIIKGRPIRI 524
+SMN ++ GR +++
Sbjct: 161 ESMNGQMLGGRNLKV 175
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/72 (25%), Positives = 34/72 (47%)
Frame = +3
Query: 309 LYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSM 488
+YV +H D++E L F + G ++ ++ R R G+ Y+ F A+ M
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGM 268
Query: 489 NFDIIKGRPIRI 524
N + G+ +R+
Sbjct: 269 NMFDLGGQYLRV 280
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Frame = +3
Query: 309 LYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSM 488
++ GDL +++++ +L + F +V R+ T +S GY +V+F+ D RA+ M
Sbjct: 205 VFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMREM 264
Query: 489 NFDIIKGRPIRI---MWSQRD 542
+ + RPI++ W +R+
Sbjct: 265 DGKYVGNRPIKLRKSAWKERN 285
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/74 (28%), Positives = 40/74 (54%)
Frame = +3
Query: 309 LYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSM 488
++V ++H + TE + +KFS G + +I + D T GYA V ++ +A A+D
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 489 NFDIIKGRPIRIMW 530
N + G+ +++ W
Sbjct: 117 NDTDLLGQNVKVDW 130
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 44.4 bits (100), Expect = 7e-05
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Frame = +3
Query: 309 LYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSM 488
+++G L T L + F G V V RD T+R+ G+ ++ F P+ ++ L++
Sbjct: 47 MFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNR 106
Query: 489 NFDIIKGRPI--RIMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFSAFGNI 647
+ + G+ I ++ + +R + + VFI L T + M F +G +
Sbjct: 107 EHE-LDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKV 160
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 44.4 bits (100), Expect = 7e-05
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Frame = +3
Query: 309 LYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSM 488
+++G L T L + F G V V RD T+R+ G+ ++ F P+ ++ L++
Sbjct: 47 MFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNR 106
Query: 489 NFDIIKGRPI--RIMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFSAFGNI 647
+ + G+ I ++ + +R + + VFI L T + M F +G +
Sbjct: 107 EHE-LDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKV 160
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/66 (36%), Positives = 34/66 (51%)
Frame = +3
Query: 285 PPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPAD 464
PP + L++G L D T+ L FS GPV+ V RD T+ S G+ +V F
Sbjct: 45 PPQ--LRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFS 102
Query: 465 AERALD 482
AE A++
Sbjct: 103 AESAMN 108
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/66 (36%), Positives = 34/66 (51%)
Frame = +3
Query: 285 PPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPAD 464
PP + L++G L D T+ L FS GPV+ V RD T+ S G+ +V F
Sbjct: 65 PPQ--LRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFS 122
Query: 465 AERALD 482
AE A++
Sbjct: 123 AESAMN 128
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/66 (36%), Positives = 34/66 (51%)
Frame = +3
Query: 285 PPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPAD 464
PP + L++G L D T+ L FS GPV+ V RD T+ S G+ +V F
Sbjct: 66 PPQ--LRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFS 123
Query: 465 AERALD 482
AE A++
Sbjct: 124 AESAMN 129
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/73 (30%), Positives = 39/73 (53%)
Frame = +3
Query: 300 MASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 479
+ ++VG L S+ T+ ++ E +S G + I V RD T+RS G+ +V F + + A+
Sbjct: 22 LRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAM 81
Query: 480 DSMNFDIIKGRPI 518
II G+ +
Sbjct: 82 -KQRPHIIDGKTV 93
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/73 (30%), Positives = 39/73 (53%)
Frame = +3
Query: 300 MASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 479
+ ++VG L S+ T+ ++ E +S G + I V RD T+RS G+ +V F + + A+
Sbjct: 22 LRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAM 81
Query: 480 DSMNFDIIKGRPI 518
II G+ +
Sbjct: 82 -KQRPHIIDGKTV 93
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/73 (30%), Positives = 39/73 (53%)
Frame = +3
Query: 300 MASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 479
+ ++VG L S+ T+ ++ E +S G + I V RD T+RS G+ +V F + + A+
Sbjct: 22 LRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAM 81
Query: 480 DSMNFDIIKGRPI 518
II G+ +
Sbjct: 82 -KQRPHIIDGKTV 93
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/74 (29%), Positives = 40/74 (54%)
Frame = +3
Query: 303 ASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 482
A +Y+G L ++E + FS G V++I + RD T +S G+A++ ++ A+D
Sbjct: 38 AWIYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVD 97
Query: 483 SMNFDIIKGRPIRI 524
+ N + R IR+
Sbjct: 98 NFNGISLHKRMIRV 111
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/74 (28%), Positives = 39/74 (52%)
Frame = +3
Query: 315 VGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSMNF 494
V +L ++ E L + F G V+ I + RD +T G+A+V F+ DA RA+ +N
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELND 239
Query: 495 DIIKGRPIRIMWSQ 536
+ +++ W++
Sbjct: 240 IRMYHMVLKVEWTR 253
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 41.1 bits (92), Expect = 7e-04
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Frame = +3
Query: 285 PPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPAD 464
P N + V +LH I E M+ + F S G + I + D R + G+A + F+ D
Sbjct: 121 PGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDS-NRENRGFATITFRNADD 179
Query: 465 AERALDSMNFDIIKGRPIRIMWSQRD--PSLRKSGVGNVFIKNLDKTIDNK 611
A+++ + +N + GR IR+ Q P+++K ++ ++LD D +
Sbjct: 180 AQKSCEQLNNFELAGRCIRLSIKQESQAPAVKKE-EASIHQRSLDDVGDRQ 229
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 41.1 bits (92), Expect = 7e-04
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Frame = +3
Query: 285 PPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPAD 464
P N + V +LH I E M+ + F S G + I + D R + G+A + F+ D
Sbjct: 266 PGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDS-NRENRGFATITFRNADD 324
Query: 465 AERALDSMNFDIIKGRPIRIMWSQRD--PSLRKSGVGNVFIKNLDKTIDNK 611
A+++ + +N + GR IR+ Q P+++K ++ ++LD D +
Sbjct: 325 AQKSCEQLNNFELAGRCIRLSIKQESQAPAVKKE-EASIHQRSLDDVGDRQ 374
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = +3
Query: 309 LYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSM 488
L+V ++ E L F GPV+ + + + R S G+ +V Q P DA+RA
Sbjct: 102 LHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFN--ERGSKGFGFVTMQNPDDADRARAEF 159
Query: 489 NFDIIKGRPIRI 524
N I+GR + +
Sbjct: 160 NGTTIEGRRVEV 171
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = +3
Query: 309 LYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSM 488
L+V ++ E L F GPV+ + + + R S G+ +V Q P DA+RA
Sbjct: 102 LHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFN--ERGSKGFGFVTMQNPDDADRARAEF 159
Query: 489 NFDIIKGRPIRI 524
N I+GR + +
Sbjct: 160 NGTTIEGRRVEV 171
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/72 (33%), Positives = 34/72 (47%)
Frame = +3
Query: 309 LYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSM 488
++VG L ++ L E F G + V D T++S GY +V + A AERA
Sbjct: 37 IFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKDP 96
Query: 489 NFDIIKGRPIRI 524
N II GR +
Sbjct: 97 N-PIIDGRKANV 107
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/50 (46%), Positives = 26/50 (52%)
Frame = +3
Query: 342 EAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSMN 491
E L F G VL IRV R+ T G+AYV F A AE A +SMN
Sbjct: 45 EKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAVAEIAAESMN 94
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 38.3 bits (85), Expect = 0.005
Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Frame = +3
Query: 303 ASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAE---R 473
A +YVG L SD T L E F G R+ + + RR G+A+V + DAE R
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFG-----RIRKVWVARRPPGFAFVEYDDVRDAEDAVR 57
Query: 474 ALDSMNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKTIDN 608
ALD ++ R +R R G G D+ ++N
Sbjct: 58 ALDGSRICGVRARVELSTGQRRGGGGRGGGFGGRGGGGRDRLVEN 102
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 37.1 bits (82), Expect = 0.011
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +3
Query: 363 FSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSMNFDIIKGRPIRI 524
F GPV+ + + + R S G+ +V Q P DA+RA N I+GR + +
Sbjct: 2 FEKVGPVVDVEIIFN--ERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEV 53
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 37.1 bits (82), Expect = 0.011
Identities = 25/74 (33%), Positives = 37/74 (50%)
Frame = +3
Query: 303 ASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 482
A +YVG L SD T L E F G R+ + + RR G+A+V + DAE A+
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFG-----RIRKVWVARRPPGFAFVEYDDVRDAEDAVR 57
Query: 483 SMNFDIIKGRPIRI 524
+++ I G R+
Sbjct: 58 ALDGSRICGVRARV 71
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 37.1 bits (82), Expect = 0.011
Identities = 25/74 (33%), Positives = 37/74 (50%)
Frame = +3
Query: 303 ASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 482
A +YVG L SD T L E F G R+ + + RR G+A+V + DAE A+
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFG-----RIRKVWVARRPPGFAFVEYDDVRDAEDAVR 57
Query: 483 SMNFDIIKGRPIRI 524
+++ I G R+
Sbjct: 58 ALDGSRICGVRARV 71
>AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical
protein C07H6.4 protein.
Length = 933
Score = 36.7 bits (81), Expect = 0.015
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = +3
Query: 306 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVC---RDMITRRSLGYAYVNFQQPADAERA 476
++YV ++ +TE L F S GP+ ++++ + RR A+V F AD +R
Sbjct: 201 NVYVSNIPHSVTEDDLLFTFGSFGPLAALKILYPRSEEERRRPHICAFVAFMSRADVDRF 260
Query: 477 LDSMNFDIIKGRPIRIMWSQ 536
+ + I++ PIR +++
Sbjct: 261 MAEVRVIIVRNEPIRFAFAR 280
>AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical
protein Y37D8A.21 protein.
Length = 282
Score = 36.3 bits (80), Expect = 0.019
Identities = 22/74 (29%), Positives = 37/74 (50%)
Frame = +3
Query: 270 KMNPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNF 449
K P PP ++YV + ++ E +L E F AGPV+ + + RD + + +A V F
Sbjct: 4 KPTPSPPEE--RTIYVANFSEEVDEELLEELFIQAGPVVKV-ILRD-VRDSNAKFALVEF 59
Query: 450 QQPADAERALDSMN 491
+ A++ MN
Sbjct: 60 EDELSVLFAIELMN 73
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 35.9 bits (79), Expect = 0.026
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +3
Query: 351 LFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSMNFDIIKGRPIRI 524
+FEKF G V + + + R S G+ +V ++P DAERA ++ +I+GR I +
Sbjct: 172 MFEKF---GVVSDVEIIFN--ERGSKGFGFVTMERPQDAERARQELHGSMIEGRKIEV 224
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 35.9 bits (79), Expect = 0.026
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +3
Query: 351 LFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSMNFDIIKGRPIRI 524
+FEKF G V + + + R S G+ +V ++P DAERA ++ +I+GR I +
Sbjct: 172 MFEKF---GVVSDVEIIFN--ERGSKGFGFVTMERPQDAERARQELHGSMIEGRKIEV 224
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 35.9 bits (79), Expect = 0.026
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = +3
Query: 333 DITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSMNFDIIKGR 512
D E + E G V I VC + I +G YV F + DAE+A + +N G+
Sbjct: 89 DFYEEVFVEMERKYGEVEEINVCEN-IGEHMVGNVYVKFMKEEDAEKAKNDLNNRWFNGQ 147
Query: 513 PI 518
PI
Sbjct: 148 PI 149
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 34.3 bits (75), Expect = 0.078
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = +3
Query: 309 LYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAE---RAL 479
+YVG+L D+ E + + F G + + D+ + R +A+V F+ DAE RA
Sbjct: 11 VYVGNLPGDVREKEVEDIFHKYGRIKYV----DIKSGRGPAFAFVEFEDHRDAEDAVRAR 66
Query: 480 DSMNFDIIKGRPIRIMWSQ 536
D FD GR IR+ +++
Sbjct: 67 DGYEFD---GRRIRVEFTR 82
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 34.3 bits (75), Expect = 0.078
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = +3
Query: 309 LYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAE---RAL 479
+YVG+L D+ E + + F G + + D+ + R +A+V F+ DAE RA
Sbjct: 11 VYVGNLPGDVREKEVEDIFHKYGRIKYV----DIKSGRGPAFAFVEFEDHRDAEDAVRAR 66
Query: 480 DSMNFDIIKGRPIRIMWSQ 536
D FD GR IR+ +++
Sbjct: 67 DGYEFD---GRRIRVEFTR 82
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 34.3 bits (75), Expect = 0.078
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 1/113 (0%)
Frame = +3
Query: 306 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDS 485
+L+VG++ SD+ E + F G V + + + T YA+V FQ ++A+ +
Sbjct: 170 TLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMFQ---TVDQAIQA 224
Query: 486 MNFDIIKGRPIRIMWSQRDPSLRKSGVG-NVFIKNLDKTIDNKAMYDTFSAFG 641
+ + RPIR S+ KS V +F+ L D + + F FG
Sbjct: 225 KAEE--QDRPIRAGGSRMKIGYGKSQVSRRLFVGGLGSWCDKEILQKAFGEFG 275
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 34.3 bits (75), Expect = 0.078
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 1/113 (0%)
Frame = +3
Query: 306 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDS 485
+L+VG++ SD+ E + F G V + + + T YA+V FQ ++A+ +
Sbjct: 170 TLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMFQ---TVDQAIQA 224
Query: 486 MNFDIIKGRPIRIMWSQRDPSLRKSGVG-NVFIKNLDKTIDNKAMYDTFSAFG 641
+ + RPIR S+ KS V +F+ L D + + F FG
Sbjct: 225 KAEE--QDRPIRAGGSRMKIGYGKSQVSRRLFVGGLGSWCDKEILQKAFGEFG 275
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 34.3 bits (75), Expect = 0.078
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 1/113 (0%)
Frame = +3
Query: 306 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDS 485
+L+VG++ SD+ E + F G V + + + T YA+V FQ ++A+ +
Sbjct: 147 TLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMFQ---TVDQAIQA 201
Query: 486 MNFDIIKGRPIRIMWSQRDPSLRKSGVG-NVFIKNLDKTIDNKAMYDTFSAFG 641
+ + RPIR S+ KS V +F+ L D + + F FG
Sbjct: 202 KAEE--QDRPIRAGGSRMKIGYGKSQVSRRLFVGGLGSWCDKEILQKAFGEFG 252
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 34.3 bits (75), Expect = 0.078
Identities = 26/113 (23%), Positives = 46/113 (40%)
Frame = +3
Query: 309 LYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSM 488
++VG + ++ L F+ G V +V D RS G+A+V F + AL +
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAR 90
Query: 489 NFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFSAFGNI 647
IKG+ + + P+ + VF+ L + + F FG +
Sbjct: 91 E-QTIKGKSVEV-----KPAKSREN-KKVFVGGLPSDYSEQDLRSHFEQFGKV 136
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 34.3 bits (75), Expect = 0.078
Identities = 26/113 (23%), Positives = 46/113 (40%)
Frame = +3
Query: 309 LYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSM 488
++VG + ++ L F+ G V +V D RS G+A+V F + AL +
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAR 90
Query: 489 NFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFSAFGNI 647
IKG+ + + P+ + VF+ L + + F FG +
Sbjct: 91 E-QTIKGKSVEV-----KPAKSREN-KKVFVGGLPSDYSEQDLRSHFEQFGKV 136
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 31.9 bits (69), Expect = 0.42
Identities = 22/76 (28%), Positives = 38/76 (50%)
Frame = +3
Query: 309 LYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSM 488
LY+ +L IT ++E F G V IRV TR G A+V ++ DA+ A + +
Sbjct: 21 LYIKNLPYKITTEEMYEIFGKFGAVRQIRVGNTAETR---GTAFVVYEDIFDAKTACEHL 77
Query: 489 NFDIIKGRPIRIMWSQ 536
+ + R + +++ Q
Sbjct: 78 SGYNVSNRYLVVLYYQ 93
>U28928-13|AAL16321.1| 339|Caenorhabditis elegans Hypothetical
protein C44B7.2b protein.
Length = 339
Score = 31.5 bits (68), Expect = 0.55
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +3
Query: 276 NPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGPV 383
+P PN P ++V +LH +TEA L E S+ GPV
Sbjct: 24 DPTNPN-PSIVVHVRNLHQKVTEADLLEALSNFGPV 58
>U28928-12|AAL16320.2| 597|Caenorhabditis elegans Hypothetical
protein C44B7.2a protein.
Length = 597
Score = 31.5 bits (68), Expect = 0.55
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +3
Query: 276 NPGPPNYPMASLYVGDLHSDITEAMLFEKFSSAGPV 383
+P PN P ++V +LH +TEA L E S+ GPV
Sbjct: 24 DPTNPN-PSIVVHVRNLHQKVTEADLLEALSNFGPV 58
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 31.1 bits (67), Expect = 0.73
Identities = 22/91 (24%), Positives = 42/91 (46%)
Frame = +3
Query: 285 PPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPAD 464
P ++ +YV ++ E L F + G VLS+ + + R S G+ +V
Sbjct: 45 PASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTN--DRGSKGFGFVTLDSIES 102
Query: 465 AERALDSMNFDIIKGRPIRIMWSQRDPSLRK 557
E+A +++ ++GR I + + P+ RK
Sbjct: 103 CEKARAALHESHVQGRIIEV--RRATPTRRK 131
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 31.1 bits (67), Expect = 0.73
Identities = 22/91 (24%), Positives = 42/91 (46%)
Frame = +3
Query: 285 PPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPAD 464
P ++ +YV ++ E L F + G VLS+ + + R S G+ +V
Sbjct: 45 PASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTN--DRGSKGFGFVTLDSIES 102
Query: 465 AERALDSMNFDIIKGRPIRIMWSQRDPSLRK 557
E+A +++ ++GR I + + P+ RK
Sbjct: 103 CEKARAALHESHVQGRIIEV--RRATPTRRK 131
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +3
Query: 297 PMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRR-SLGYAYVNFQQPADAER 473
P + + +L ++ + L E FS G + ++ + D GY YV + DAE+
Sbjct: 131 PAKRVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDAEK 190
Query: 474 ALDSMNFDIIKGRPIRI 524
++ M+ I G + +
Sbjct: 191 SIKHMDGGQIDGMAVHV 207
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +3
Query: 429 GYAYVNFQQPADAERALDSMNFDIIKGRPIRIMWSQRDPSLRK 557
GY +V F A+A++ + M+ + G+ I + W++ D RK
Sbjct: 131 GYGFVLFDTRANAQKKIVEMDGKTLNGKLISVSWARPDTVGRK 173
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +3
Query: 363 FSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSMNFDIIKGRPIRIM 527
F G V ++V D T G+A V F P A A +++ + KGR + I+
Sbjct: 299 FKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSALDGYVFKGRMMHIL 353
>Z74031-14|CAD66220.1| 187|Caenorhabditis elegans Hypothetical
protein F32D8.13 protein.
Length = 187
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +3
Query: 330 SDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDSMNFDII 503
SD +E FS+ ++IR+ R+ GY +V A++E LD F+++
Sbjct: 103 SDCRRRTDYEYFSANYRTVTIRIETSEEDRKQRGYQFVEGVDDAESECGLDDYKFNLV 160
>U80455-3|AAO38606.1| 145|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform c protein.
Length = 145
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 570 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKV 662
N+FI +L + + + +TF+ FG ILS KV
Sbjct: 77 NLFIYHLPQDFGDSDLINTFAPFGGILSAKV 107
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 570 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKV 662
N+FI +L + + + +TF+ FG ILS KV
Sbjct: 336 NLFIYHLPQDFGDSDLINTFAPFGGILSAKV 366
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +3
Query: 306 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQ 452
+LYVG+L S +TE + F+ G V +V D LGY N Q
Sbjct: 47 TLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD-----ELGYLATNAQ 90
>AC006708-8|AAF60429.3| 481|Caenorhabditis elegans Hypothetical
protein Y110A7A.15a protein.
Length = 481
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = -1
Query: 652 LNMFPNAENVSYIALLSIVLSRFLI--KTFPTPDL 554
L PN NV YI+ +S ++ KTFP PDL
Sbjct: 130 LKASPNTTNVDYISFISEDGGYLMMRNKTFPAPDL 164
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,408,775
Number of Sequences: 27780
Number of extensions: 250475
Number of successful extensions: 754
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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