Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_M02
(573 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene prod... 237 4e-63
U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd (glyceralde... 237 4e-63
U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd (glyceralde... 237 4e-63
X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene prod... 234 3e-62
Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical pr... 231 2e-61
X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein. 231 2e-61
Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical pr... 231 3e-61
X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein. 231 3e-61
X04818-1|CAA28504.1| 341|Caenorhabditis elegans glyceraldehyde-... 231 3e-61
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 34 0.062
AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical ... 32 0.33
AC025726-9|AAK73924.1| 594|Caenorhabditis elegans Hypothetical ... 30 1.0
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 30 1.0
AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical ... 30 1.3
Z49071-2|CAA88874.1| 458|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical pr... 28 4.1
AC006603-1|AAF39749.1| 772|Caenorhabditis elegans Hypothetical ... 28 5.4
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 27 9.5
>X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene product
protein.
Length = 341
Score = 237 bits (580), Expect = 4e-63
Identities = 120/167 (71%), Positives = 139/167 (83%), Gaps = 7/167 (4%)
Frame = +3
Query: 93 IGINGFGRIGRLVLRASIDKGA-DVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAVDG 269
+GINGFGRIGRLVLRA+++K + +VVA+NDPFI +DYMVYLFQYDSTHGRFKGTV
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 270 HLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAKKVI 434
+L+V GK KI V++ RDP I WG +GA+YVVESTGVFTT +KA+AHL GGAKKVI
Sbjct: 66 YLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHLKGGAKKVI 125
Query: 435 ISAPSADAPMFVVGVNLEAYD-PSYKVISNASCTTNCLAPLAKVIHD 572
ISAPSADAPMFVVGVN E YD + +ISNASCTTNCLAPLAKVI+D
Sbjct: 126 ISAPSADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVIND 172
>U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 2
protein.
Length = 341
Score = 237 bits (580), Expect = 4e-63
Identities = 120/167 (71%), Positives = 139/167 (83%), Gaps = 7/167 (4%)
Frame = +3
Query: 93 IGINGFGRIGRLVLRASIDKGA-DVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAVDG 269
+GINGFGRIGRLVLRA+++K + +VVA+NDPFI +DYMVYLFQYDSTHGRFKGTV
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 270 HLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAKKVI 434
+L+V GK KI V++ RDP I WG +GA+YVVESTGVFTT +KA+AHL GGAKKVI
Sbjct: 66 YLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHLKGGAKKVI 125
Query: 435 ISAPSADAPMFVVGVNLEAYD-PSYKVISNASCTTNCLAPLAKVIHD 572
ISAPSADAPMFVVGVN E YD + +ISNASCTTNCLAPLAKVI+D
Sbjct: 126 ISAPSADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVIND 172
>U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 3
protein.
Length = 341
Score = 237 bits (580), Expect = 4e-63
Identities = 120/167 (71%), Positives = 139/167 (83%), Gaps = 7/167 (4%)
Frame = +3
Query: 93 IGINGFGRIGRLVLRASIDKGA-DVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAVDG 269
+GINGFGRIGRLVLRA+++K + +VVA+NDPFI +DYMVYLFQYDSTHGRFKGTV
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 270 HLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAKKVI 434
+L+V GK KI V++ RDP I WG +GA+YVVESTGVFTT +KA+AHL GGAKKVI
Sbjct: 66 YLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHLKGGAKKVI 125
Query: 435 ISAPSADAPMFVVGVNLEAYD-PSYKVISNASCTTNCLAPLAKVIHD 572
ISAPSADAPMFVVGVN E YD + +ISNASCTTNCLAPLAKVI+D
Sbjct: 126 ISAPSADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVIND 172
>X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene product
protein.
Length = 341
Score = 234 bits (573), Expect = 3e-62
Identities = 119/167 (71%), Positives = 138/167 (82%), Gaps = 7/167 (4%)
Frame = +3
Query: 93 IGINGFGRIGRLVLRASIDKGA-DVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAVDG 269
+GINGFGRIGRLVLRA+++K + +V A+NDPFI +DYMVYLFQYDSTHGRFKGTV
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVDAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 270 HLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAKKVI 434
+L+V GK KI V++ RDP I WG +GA+YVVESTGVFTT +KA+AHL GGAKKVI
Sbjct: 66 YLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHLKGGAKKVI 125
Query: 435 ISAPSADAPMFVVGVNLEAYD-PSYKVISNASCTTNCLAPLAKVIHD 572
ISAPSADAPMFVVGVN E YD + +ISNASCTTNCLAPLAKVI+D
Sbjct: 126 ISAPSADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVIND 172
>Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical
protein F33H1.2 protein.
Length = 341
Score = 231 bits (566), Expect = 2e-61
Identities = 119/169 (70%), Positives = 137/169 (81%), Gaps = 7/169 (4%)
Frame = +3
Query: 87 SKIGINGFGRIGRLVLRASIDKGA-DVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAV 263
+ +GINGFGRIGRLVLRA+++K VVA+NDPFI +DYMVYLF+YDSTHG+FKGTV
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 264 DGHLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAKK 428
L+V +GK KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL GGAKK
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKK 123
Query: 429 VIISAPSADAPMFVVGVNLEAYDPSY-KVISNASCTTNCLAPLAKVIHD 572
VIISAPSADAPM+VVGVN E YD S VISNASCTTNCLAPLAKVI+D
Sbjct: 124 VIISAPSADAPMYVVGVNHEKYDASNDHVISNASCTTNCLAPLAKVIND 172
>X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein.
Length = 341
Score = 231 bits (566), Expect = 2e-61
Identities = 119/169 (70%), Positives = 137/169 (81%), Gaps = 7/169 (4%)
Frame = +3
Query: 87 SKIGINGFGRIGRLVLRASIDKGA-DVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAV 263
+ +GINGFGRIGRLVLRA+++K VVA+NDPFI +DYMVYLF+YDSTHG+FKGTV
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 264 DGHLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAKK 428
L+V +GK KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL GGAKK
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKK 123
Query: 429 VIISAPSADAPMFVVGVNLEAYDPSY-KVISNASCTTNCLAPLAKVIHD 572
VIISAPSADAPM+VVGVN E YD S VISNASCTTNCLAPLAKVI+D
Sbjct: 124 VIISAPSADAPMYVVGVNHEKYDASNDHVISNASCTTNCLAPLAKVIND 172
>Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical
protein T09F3.3 protein.
Length = 341
Score = 231 bits (565), Expect = 3e-61
Identities = 118/169 (69%), Positives = 137/169 (81%), Gaps = 7/169 (4%)
Frame = +3
Query: 87 SKIGINGFGRIGRLVLRASIDKGA-DVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAV 263
+ +GINGFGRIGRLVLRA+++K VVA+NDPFI +DYMVYLF+YDSTHG+FKGTV
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 264 DGHLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAKK 428
L+V +GK KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL GGAKK
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKK 123
Query: 429 VIISAPSADAPMFVVGVNLEAYDPSY-KVISNASCTTNCLAPLAKVIHD 572
VIISAPSADAPM+VVGVN E YD S V+SNASCTTNCLAPLAKVI+D
Sbjct: 124 VIISAPSADAPMYVVGVNHEKYDASNDHVVSNASCTTNCLAPLAKVIND 172
>X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein.
Length = 341
Score = 231 bits (565), Expect = 3e-61
Identities = 118/169 (69%), Positives = 137/169 (81%), Gaps = 7/169 (4%)
Frame = +3
Query: 87 SKIGINGFGRIGRLVLRASIDKGA-DVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAV 263
+ +GINGFGRIGRLVLRA+++K VVA+NDPFI +DYMVYLF+YDSTHG+FKGTV
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 264 DGHLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAKK 428
L+V +GK KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL GGAKK
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKK 123
Query: 429 VIISAPSADAPMFVVGVNLEAYDPSY-KVISNASCTTNCLAPLAKVIHD 572
VIISAPSADAPM+VVGVN E YD S V+SNASCTTNCLAPLAKVI+D
Sbjct: 124 VIISAPSADAPMYVVGVNHEKYDASNDHVVSNASCTTNCLAPLAKVIND 172
>X04818-1|CAA28504.1| 341|Caenorhabditis elegans
glyceraldehyde-3-phosphate dehydrogenaseprotein.
Length = 341
Score = 231 bits (565), Expect = 3e-61
Identities = 118/169 (69%), Positives = 137/169 (81%), Gaps = 7/169 (4%)
Frame = +3
Query: 87 SKIGINGFGRIGRLVLRASIDKGA-DVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAV 263
+ +GINGFGRIGRLVLRA+++K VVA+NDPFI +DYMVYLF+YDSTHG+FKGTV
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 264 DGHLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAKK 428
L+V +GK KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL GGAKK
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKK 123
Query: 429 VIISAPSADAPMFVVGVNLEAYDPSY-KVISNASCTTNCLAPLAKVIHD 572
VIISAPSADAPM+VVGVN E YD S V+SNASCTTNCLAPLAKVI+D
Sbjct: 124 VIISAPSADAPMYVVGVNHEKYDASNDHVVSNASCTTNCLAPLAKVIND 172
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 34.3 bits (75), Expect = 0.062
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Frame = -3
Query: 481 LTPTTNMGASALGAEMITFLAPPTK*AEALSVVVNTPVDSTTYSAPA*PHGIA---WGSL 311
L P T G + ++ ++PPT TPV +TT + PA P G++
Sbjct: 459 LAPPTTPGPTFYPVTTVSTMSPPTT---VTVPTTPTPVPTTTNTPPANPTTATPTTVGTM 515
Query: 310 SENTA---IFFPFTTRCPSTASTVPLKRP*VES 221
+ +T + P TT P+T +T P+ +P V S
Sbjct: 516 TPSTGTTTVPVPTTTGSPTTQTTAPVTKPTVPS 548
>AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical
protein T20H9.6 protein.
Length = 758
Score = 31.9 bits (69), Expect = 0.33
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Frame = -2
Query: 341 LTPWNSMGIPLREHSYLLSVYDEVSIYG-LNGTLETTVSRIILEKVDHVVK-TNERIIDS 168
L + + P L VY+ + Y ++ TLETT+ I + +D+V+K +++
Sbjct: 242 LFEFEKLNNPQNSFPLLYPVYETIQEYSKISETLETTILSGIQKNIDNVIKIAKSAKLNA 301
Query: 167 NNIGTLINR--STEHQATDATKTVNSDFRHD 81
++ L N S ++T A+K + F D
Sbjct: 302 ESVEQLSNMLLSRHSKSTKASKHITGFFNGD 332
>AC025726-9|AAK73924.1| 594|Caenorhabditis elegans Hypothetical
protein Y71G12B.23a protein.
Length = 594
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +3
Query: 210 LFQYDSTHGRFKGTVEAVDGHLVVNGKKIAVFSERDPHAIPWGQAGAEYVVESTGVF 380
L+QY+ H R+K T+E + L+ G +A+F+ D + W G ++ + GVF
Sbjct: 496 LYQYNF-HERYK-TLETILYILIAAGPSVAIFTMNDRTGLEWMMTGG--MMYAVGVF 548
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 30.3 bits (65), Expect = 1.0
Identities = 27/82 (32%), Positives = 34/82 (41%)
Frame = -3
Query: 490 ASRLTPTTNMGASALGAEMITFLAPPTK*AEALSVVVNTPVDSTTYSAPA*PHGIAWGSL 311
A T T +S + T AP T E S NTPV +TT +A P +
Sbjct: 793 APETTSTEPPSSSTSPVQTTTITAPETTSTEPPSSS-NTPVQTTTTTA---PETTSTEPP 848
Query: 310 SENTAIFFPFTTRCPSTASTVP 245
S +T+ TT P T ST P
Sbjct: 849 SSSTSPVQTTTTTAPETTSTEP 870
Score = 29.9 bits (64), Expect = 1.3
Identities = 27/82 (32%), Positives = 34/82 (41%)
Frame = -3
Query: 490 ASRLTPTTNMGASALGAEMITFLAPPTK*AEALSVVVNTPVDSTTYSAPA*PHGIAWGSL 311
A T T +S + T AP T E S NTPV +TT +A P +
Sbjct: 655 APETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSS-NTPVQTTTTTA---PETTSTEPP 710
Query: 310 SENTAIFFPFTTRCPSTASTVP 245
S +T+ TT P T ST P
Sbjct: 711 SSSTSPVQTTTTTAPETTSTEP 732
Score = 27.5 bits (58), Expect = 7.2
Identities = 26/82 (31%), Positives = 33/82 (40%)
Frame = -3
Query: 490 ASRLTPTTNMGASALGAEMITFLAPPTK*AEALSVVVNTPVDSTTYSAPA*PHGIAWGSL 311
A T T +S + T AP T E S NTPV +TT +A P +
Sbjct: 747 APETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSS-NTPVQTTTTTA---PETTSTEPP 802
Query: 310 SENTAIFFPFTTRCPSTASTVP 245
S +T+ T P T ST P
Sbjct: 803 SSSTSPVQTTTITAPETTSTEP 824
>AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical
protein W05F2.7 protein.
Length = 1424
Score = 29.9 bits (64), Expect = 1.3
Identities = 21/79 (26%), Positives = 31/79 (39%)
Frame = -3
Query: 481 LTPTTNMGASALGAEMITFLAPPTK*AEALSVVVNTPVDSTTYSAPA*PHGIAWGSLSEN 302
+TP T + L A T + P T+ A V ++TP T + P P WG+ +
Sbjct: 627 VTPMTEATGAFLSAGS-TAMTPSTQGTGATGVTMSTPGTMATGTTPMTPTVSVWGTNTPA 685
Query: 301 TAIFFPFTTRCPSTASTVP 245
P T R + P
Sbjct: 686 VTPASPTTIRLADPGAVTP 704
>Z49071-2|CAA88874.1| 458|Caenorhabditis elegans Hypothetical
protein T22C8.2 protein.
Length = 458
Score = 29.5 bits (63), Expect = 1.8
Identities = 23/89 (25%), Positives = 43/89 (48%)
Frame = +3
Query: 246 GTVEAVDGHLVVNGKKIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAK 425
G ++ D H V GK+ A+F E IP+ +A E ++ G+ D AHL+ K
Sbjct: 59 GILQNEDQHFV-GGKQFAIFYEHSFGKIPYFKAQNESDPKNGGLPQMGD-LEAHLIQAEK 116
Query: 426 KVIISAPSADAPMFVVGVNLEAYDPSYKV 512
+ + P + V +++E + P +++
Sbjct: 117 DINETIPDENFNGIAV-IDIEEFRPMWEL 144
>Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical protein
F54F3.1 protein.
Length = 1584
Score = 28.3 bits (60), Expect = 4.1
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = -2
Query: 419 STHQVSRSFISGCEHTG*FNNVFSTS---LTPWNSMGIPLREHSYLLSVYDEVSIYGLNG 249
S H + S ++G EH FN S+ W+S R Y S+ DE+ + LNG
Sbjct: 1337 SGHSIRTSSLNGTEHKSYFNKELSSPEGIAVDWSS-----RNVYYADSMNDEIGVASLNG 1391
Query: 248 TLETTV 231
+ ++
Sbjct: 1392 KFKKSL 1397
>AC006603-1|AAF39749.1| 772|Caenorhabditis elegans Hypothetical
protein B0524.4 protein.
Length = 772
Score = 27.9 bits (59), Expect = 5.4
Identities = 22/62 (35%), Positives = 29/62 (46%)
Frame = +3
Query: 243 KGTVEAVDGHLVVNGKKIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGA 422
KGT++ +D V GKK+A E G++GA+ G KA A GGA
Sbjct: 707 KGTLKELDAFFVAYGKKLA---EGGKAGNSGGKSGAKNGPGKAGAKNEPGKAGAG--GGA 761
Query: 423 KK 428
KK
Sbjct: 762 KK 763
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 27.1 bits (57), Expect = 9.5
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Frame = -3
Query: 487 SRLTPTTNMGASALGAEMITFLAPPTK*AEALSVVVNTPVDSTTYSAPA*PHGIAWGSLS 308
S+ T T + S + ++T + PT + + TP +T + S++
Sbjct: 515 SKQTNTISPHLSTITGSIVT--STPTMAPQTSASPTTTPTHTTASQPTTTKPVVTTNSVT 572
Query: 307 ENTA---IFFPFTTRCPSTASTVPLKRP*VES 221
+T + P TT P+T +T P+ +P V S
Sbjct: 573 PSTGTTTVPVPTTTGSPTTQTTAPVTKPTVPS 604
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,923,533
Number of Sequences: 27780
Number of extensions: 304660
Number of successful extensions: 924
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 897
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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