Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_M02
(573 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g16300.1 68414.m01951 glyceraldehyde 3-phosphate dehydrogenas... 233 5e-62
At1g79530.1 68414.m09271 glyceraldehyde 3-phosphate dehydrogenas... 232 1e-61
At1g13440.1 68414.m01570 glyceraldehyde 3-phosphate dehydrogenas... 208 3e-54
At3g04120.1 68416.m00436 glyceraldehyde-3-phosphate dehydrogenas... 207 5e-54
At1g12900.1 68414.m01498 glyceraldehyde 3-phosphate dehydrogenas... 151 3e-37
At3g26650.1 68416.m03330 glyceraldehyde 3-phosphate dehydrogenas... 145 2e-35
At1g42970.1 68414.m04947 glyceraldehyde-3-phosphate dehydrogenas... 143 6e-35
At3g03910.1 68416.m00405 glutamate dehydrogenase, putative simil... 32 0.24
At4g15420.1 68417.m02359 PRLI-interacting factor K nearly identi... 31 0.72
At5g18170.1 68418.m02133 glutamate dehydrogenase 1 (GDH1) identi... 29 1.7
At5g48110.1 68418.m05943 terpene synthase/cyclase family protein 27 8.9
At5g07920.1 68418.m00916 diacylglycerol kinase 1 (DGK1) identica... 27 8.9
At5g07440.1 68418.m00851 glutamate dehydrogenase 2 (GDH2) identi... 27 8.9
>At1g16300.1 68414.m01951 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative
similar to glyceraldehyde-3-phosphate dehydrogenase
[Pinus sylvestris] GI:1100223; contains Pfam profiles
PF02800: Glyceraldehyde 3-phosphate dehydrogenase
C-terminal domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 420
Score = 233 bits (571), Expect = 5e-62
Identities = 109/164 (66%), Positives = 132/164 (80%), Gaps = 2/164 (1%)
Frame = +3
Query: 87 SKIGINGFGRIGRLVLR-ASIDKGADVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAV 263
+K+GINGFGRIGRLVLR A+ +VVA+NDPFI YM Y+F+YDSTHG +KGT+ +
Sbjct: 85 TKVGINGFGRIGRLVLRIATFRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGNYKGTINVI 144
Query: 264 DGH-LVVNGKKIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAKKVIIS 440
D L +NGK++ V S+RDP IPW GAEYVVES+GVFTT +AS+HL GGAKKVIIS
Sbjct: 145 DDSTLEINGKQVKVVSKRDPAEIPWADLGAEYVVESSGVFTTVGQASSHLKGGAKKVIIS 204
Query: 441 APSADAPMFVVGVNLEAYDPSYKVISNASCTTNCLAPLAKVIHD 572
APSADAPMFVVGVN + Y P+ ++SNASCTTNCLAPLAKV+H+
Sbjct: 205 APSADAPMFVVGVNEKTYLPNMDIVSNASCTTNCLAPLAKVVHE 248
>At1g79530.1 68414.m09271 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative
similar to glyceraldehyde-3-phosphate dehydrogenase
[Pinus sylvestris] GI:1100223; contains Pfam profiles
PF02800: Glyceraldehyde 3-phosphate dehydrogenase
C-terminal domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 422
Score = 232 bits (568), Expect = 1e-61
Identities = 107/164 (65%), Positives = 130/164 (79%), Gaps = 2/164 (1%)
Frame = +3
Query: 87 SKIGINGFGRIGRLVLRASIDKG-ADVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAV 263
+K+GINGFGRIGRLVLR + + +VVA+NDPFI YM Y+ +YDSTHG FKG++ +
Sbjct: 87 TKVGINGFGRIGRLVLRIATSRDDIEVVAVNDPFIDAKYMAYMLKYDSTHGNFKGSINVI 146
Query: 264 DGH-LVVNGKKIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAKKVIIS 440
D L +NGKK+ V S+RDP IPW GA+YVVES+GVFTT KA++HL GGAKKVIIS
Sbjct: 147 DDSTLEINGKKVNVVSKRDPSEIPWADLGADYVVESSGVFTTLSKAASHLKGGAKKVIIS 206
Query: 441 APSADAPMFVVGVNLEAYDPSYKVISNASCTTNCLAPLAKVIHD 572
APSADAPMFVVGVN Y P+ ++SNASCTTNCLAPLAKV+H+
Sbjct: 207 APSADAPMFVVGVNEHTYQPNMDIVSNASCTTNCLAPLAKVVHE 250
>At1g13440.1 68414.m01570 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative very
strong similarity to SP|P25858 Glyceraldehyde
3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12)
{Arabidopsis thaliana}; contains Pfam profiles PF02800:
Glyceraldehyde 3-phosphate dehydrogenase C-terminal
domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 338
Score = 208 bits (507), Expect = 3e-54
Identities = 101/164 (61%), Positives = 123/164 (75%), Gaps = 3/164 (1%)
Frame = +3
Query: 90 KIGINGFGRIGRLVLRASIDKG-ADVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAV- 263
+IGINGFGRIGRLV R + + ++VA+NDPFI +YM Y+F+YDS HG++K V
Sbjct: 7 RIGINGFGRIGRLVARVVLQRDDVELVAVNDPFITTEYMTYMFKYDSVHGQWKHHELKVK 66
Query: 264 -DGHLVVNGKKIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAKKVIIS 440
D L+ K + VF R+P IPWG+AGA++VVESTGVFT DKA+AHL GGAKKV+IS
Sbjct: 67 DDKTLLFGEKPVTVFGIRNPEDIPWGEAGADFVVESTGVFTDKDKAAAHLKGGAKKVVIS 126
Query: 441 APSADAPMFVVGVNLEAYDPSYKVISNASCTTNCLAPLAKVIHD 572
APS DAPMFVVGVN Y ++SNASCTTNCLAPLAKVI+D
Sbjct: 127 APSKDAPMFVVGVNEHEYKSDLDIVSNASCTTNCLAPLAKVIND 170
>At3g04120.1 68416.m00436 glyceraldehyde-3-phosphate dehydrogenase,
cytosolic (GAPC) / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase identical to
SP|P25858 Glyceraldehyde 3-phosphate dehydrogenase,
cytosolic (EC 1.2.1.12) {Arabidopsis thaliana}
Length = 338
Score = 207 bits (505), Expect = 5e-54
Identities = 100/164 (60%), Positives = 125/164 (76%), Gaps = 3/164 (1%)
Frame = +3
Query: 90 KIGINGFGRIGRLVLRASIDKG-ADVVAINDPFIGLDYMVYLFQYDSTHGRFK-GTVEAV 263
+IGINGFGRIGRLV R + + ++VA+NDPFI +YM Y+F+YDS HG++K ++
Sbjct: 7 RIGINGFGRIGRLVARVVLQRDDVELVAVNDPFITTEYMTYMFKYDSVHGQWKHNELKIK 66
Query: 264 DGHLVVNGKK-IAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAKKVIIS 440
D ++ G+K + VF R+P IPW +AGA+YVVESTGVFT DKA+AHL GGAKKV+IS
Sbjct: 67 DEKTLLFGEKPVTVFGIRNPEDIPWAEAGADYVVESTGVFTDKDKAAAHLKGGAKKVVIS 126
Query: 441 APSADAPMFVVGVNLEAYDPSYKVISNASCTTNCLAPLAKVIHD 572
APS DAPMFVVGVN Y ++SNASCTTNCLAPLAKVI+D
Sbjct: 127 APSKDAPMFVVGVNEHEYKSDLDIVSNASCTTNCLAPLAKVIND 170
>At1g12900.1 68414.m01498 glyceraldehyde 3-phosphate dehydrogenase,
chloroplast, putative / NADP-dependent
glyceraldehydephosphate dehydrogenase, putative similar
to SP|P25856 Glyceraldehyde 3-phosphate dehydrogenase A,
chloroplast precursor (EC 1.2.1.13) (NADP-dependent
glyceraldehydephosphate dehydrogenase subunit A)
{Arabidopsis thaliana}; contains Pfam profiles PF02800:
Glyceraldehyde 3-phosphate dehydrogenase C-terminal
domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 399
Score = 151 bits (366), Expect = 3e-37
Identities = 83/164 (50%), Positives = 102/164 (62%), Gaps = 5/164 (3%)
Frame = +3
Query: 90 KIGINGFGRIGRLVLRA---SIDKGADVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVE- 257
K+ INGFGRIGR LR D DVV IND G+ +L +YDST G F V+
Sbjct: 66 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTG-GVKQASHLLKYDSTLGIFDADVKP 124
Query: 258 AVDGHLVVNGKKIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAKKVII 437
+ D L V+GK I + S+R+P +PWG+ G + V+E TGVF D A HL GAKKV+I
Sbjct: 125 SGDSALSVDGKIIKIVSDRNPSNLPWGELGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLI 184
Query: 438 SAP-SADAPMFVVGVNLEAYDPSYKVISNASCTTNCLAPLAKVI 566
+AP D P +VVGVN E Y +ISNASCTTNCLAP KV+
Sbjct: 185 TAPGKGDIPTYVVGVNAELYSHEDTIISNASCTTNCLAPFVKVL 228
>At3g26650.1 68416.m03330 glyceraldehyde 3-phosphate dehydrogenase
A, chloroplast (GAPA) / NADP-dependent
glyceraldehydephosphate dehydrogenase subunit A
identical to SP|P25856 Glyceraldehyde 3-phosphate
dehydrogenase A, chloroplast precursor (EC 1.2.1.13)
(NADP-dependent glyceraldehydephosphate dehydrogenase
subunit A) {Arabidopsis thaliana}
Length = 396
Score = 145 bits (351), Expect = 2e-35
Identities = 79/164 (48%), Positives = 102/164 (62%), Gaps = 5/164 (3%)
Frame = +3
Query: 90 KIGINGFGRIGRLVLRA---SIDKGADVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVE- 257
K+ INGFGRIGR LR D D++AIND G+ +L +YDST G F V+
Sbjct: 63 KVAINGFGRIGRNFLRCWHGRKDSPLDIIAINDTG-GVKQASHLLKYDSTLGIFDADVKP 121
Query: 258 AVDGHLVVNGKKIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAKKVII 437
+ + + V+GK I V S R+P +PW + G + V+E TGVF + A H+ GAKKVII
Sbjct: 122 SGETAISVDGKIIQVVSNRNPSLLPWKELGIDIVIEGTGVFVDREGAGKHIEAGAKKVII 181
Query: 438 SAP-SADAPMFVVGVNLEAYDPSYKVISNASCTTNCLAPLAKVI 566
+AP D P +VVGVN +AY +ISNASCTTNCLAP KV+
Sbjct: 182 TAPGKGDIPTYVVGVNADAYSHDEPIISNASCTTNCLAPFVKVL 225
>At1g42970.1 68414.m04947 glyceraldehyde-3-phosphate dehydrogenase
B, chloroplast (GAPB) / NADP-dependent
glyceraldehydephosphate dehydrogenase subunit B
identical to SP|P25857 Glyceraldehyde 3-phosphate
dehydrogenase B, chloroplast precursor (EC 1.2.1.13)
(NADP-dependent glyceraldehydephosphate dehydrogenase
subunit B) {Arabidopsis thaliana}
Length = 447
Score = 143 bits (347), Expect = 6e-35
Identities = 81/173 (46%), Positives = 104/173 (60%), Gaps = 7/173 (4%)
Frame = +3
Query: 75 TIIMSKIGINGFGRIGRLVLRA---SIDKGADVVAINDPFIGLDYMVYLFQYDSTHGRFK 245
T+ K+ INGFGRIGR LR D +VV +ND G+ +L +YDS G FK
Sbjct: 78 TVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVVLNDSG-GVKNASHLLKYDSMLGTFK 136
Query: 246 GTVEAVDGHLV-VNGKKIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGA 422
V+ VD + V+GK I V S RDP +PW + G + V+E TGVF A H+ GA
Sbjct: 137 AEVKIVDNETISVDGKLIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGA 196
Query: 423 KKVIISAPS--ADAPMFVVGVNLEAYDPSY-KVISNASCTTNCLAPLAKVIHD 572
KVII+AP+ AD P +V+GVN + Y +ISNASCTTNCLAP AKV+ +
Sbjct: 197 SKVIITAPAKGADIPTYVMGVNEQDYGHDVANIISNASCTTNCLAPFAKVLDE 249
>At3g03910.1 68416.m00405 glutamate dehydrogenase, putative similar
to glutamate dehydrogenase 1 (GDH 1) [Arabidopsis
thaliana] SWISS-PROT:Q43314
Length = 411
Score = 32.3 bits (70), Expect = 0.24
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 57 LRKYTLTIIMSKIGINGFGRIGRLVLRASIDKGADVVAIND 179
L ++ TI + I GFG +G + DKG +VA++D
Sbjct: 197 LNEHGKTISGQRFAIQGFGNVGSWAAKLISDKGGKIVAVSD 237
>At4g15420.1 68417.m02359 PRLI-interacting factor K nearly identical
to PRLI-interacting factor K [Arabidopsis thaliana]
GI:11139266; contains Pfam profiles PF03152: Ubiquitin
fusion degradation protein UFD1, PF00096: Zinc finger,
C2H2 type
Length = 561
Score = 30.7 bits (66), Expect = 0.72
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = -2
Query: 272 VSIYGLNGTLETTVSRIILEKVDHVVKTNERII-DSNNIGTLINRSTEH 129
+ +YG GT++ VS ++ E +D K ER + S+++ T+ R+ +H
Sbjct: 361 IGVYGFKGTVKYQVSVLVQESIDG-AKVGERAVSSSSDVDTVECRNCKH 408
>At5g18170.1 68418.m02133 glutamate dehydrogenase 1 (GDH1) identical
to glutamate dehydrogenase 1 (GDH 1) [Arabidopsis
thaliana] SWISS-PROT:Q43314
Length = 411
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 57 LRKYTLTIIMSKIGINGFGRIGRLVLRASIDKGADVVAIND 179
L ++ TI + I GFG +G + +KG +VA++D
Sbjct: 197 LNEHGKTISGQRFVIQGFGNVGSWAAKLISEKGGKIVAVSD 237
>At5g48110.1 68418.m05943 terpene synthase/cyclase family protein
Length = 575
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2
Query: 494 VGFQVDTNYKHGSISTWCG 438
VG +DTNYKHG T+ G
Sbjct: 541 VGRVIDTNYKHGDGLTYTG 559
>At5g07920.1 68418.m00916 diacylglycerol kinase 1 (DGK1) identical
to diacylglycerol kinase 1 (Diglyceride kinase 1, DGK 1,
DAG kinase 1) [Arabidopsis thaliana] SWISS-PROT:Q39017
Length = 728
Score = 27.1 bits (57), Expect = 8.9
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = -2
Query: 263 YGLNGTLETTVSRIILEKVDHVVKTNERIIDSNNIGTLINRSTEHQATDATKTVN 99
+G N T ++ I ++ + +TNE D+ N G+ + STE A D TVN
Sbjct: 244 HGANELASTALASIRIQSKKYK-QTNETSADTGNSGSNCDESTESTA-DTGPTVN 296
>At5g07440.1 68418.m00851 glutamate dehydrogenase 2 (GDH2) identical
to glutamate dehydrogenase 2 (GDH 2) [Arabidopsis
thaliana] SWISS-PROT:Q38946
Length = 411
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 99 INGFGRIGRLVLRASIDKGADVVAIND 179
I GFG +G + +KG VVA++D
Sbjct: 211 IQGFGNVGTWAAKLIHEKGGKVVAVSD 237
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,148,892
Number of Sequences: 28952
Number of extensions: 286131
Number of successful extensions: 743
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 728
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1112061928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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