Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_M01
         (607 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   2.0  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   2.0  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    23   2.0  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   2.0  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   2.0  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    23   2.0  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   2.0  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    23   2.0  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   2.0  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        23   2.6  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    23   2.6  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   4.6  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      21   8.1  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 184 TRPTTSPANSSTIRISGITIDIRKRTT 264
           T P ++P+NS+  + SG+T  +   T+
Sbjct: 126 TPPLSTPSNSNATKSSGLTSPLSVSTS 152


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 184 TRPTTSPANSSTIRISGITIDIRKRTT 264
           T P ++P+NS+  + SG+T  +   T+
Sbjct: 126 TPPLSTPSNSNATKSSGLTSPLSVSTS 152


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 184 TRPTTSPANSSTIRISGITIDIRKRTT 264
           T P ++P+NS+  + SG+T  +   T+
Sbjct: 126 TPPLSTPSNSNATKSSGLTSPLSVSTS 152


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 184 TRPTTSPANSSTIRISGITIDIRKRTT 264
           T P ++P+NS+  + SG+T  +   T+
Sbjct: 126 TPPLSTPSNSNATKSSGLTSPLSVSTS 152


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 184 TRPTTSPANSSTIRISGITIDIRKRTT 264
           T P ++P+NS+  + SG+T  +   T+
Sbjct: 126 TPPLSTPSNSNATKSSGLTSPLSVSTS 152


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 184 TRPTTSPANSSTIRISGITIDIRKRTT 264
           T P ++P+NS+  + SG+T  +   T+
Sbjct: 82  TPPLSTPSNSNATKSSGLTSPLSVSTS 108


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 184 TRPTTSPANSSTIRISGITIDIRKRTT 264
           T P ++P+NS+  + SG+T  +   T+
Sbjct: 126 TPPLSTPSNSNATKSSGLTSPLSVSTS 152


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 184 TRPTTSPANSSTIRISGITIDIRKRTT 264
           T P ++P+NS+  + SG+T  +   T+
Sbjct: 126 TPPLSTPSNSNATKSSGLTSPLSVSTS 152


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 184 TRPTTSPANSSTIRISGITIDIRKRTT 264
           T P ++P+NS+  + SG+T  +   T+
Sbjct: 126 TPPLSTPSNSNATKSSGLTSPLSVSTS 152


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +3

Query: 303 LETGNLPDLTEEQSSSIDESTRRDE 377
           LET NL +   +  S +DES  R E
Sbjct: 503 LETNNLSETFTQNLSLMDESEGRQE 527


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 8/32 (25%), Positives = 18/32 (56%)
 Frame = +3

Query: 186 TADDVARELIYDTNIRHNDRYPEANDVDNLDN 281
           T+  +   L+   ++ H +   E +D+D++DN
Sbjct: 254 TSSIMMHHLVNPQSLNHQEVKAECSDLDSVDN 285


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 261 DVDNLDNEIMEALTLETGNL 320
           D D LDNE+  A  L+  NL
Sbjct: 600 DTDTLDNEMRGAWPLKLQNL 619


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 10/38 (26%), Positives = 14/38 (36%)
 Frame = -1

Query: 535 KFQYLSTKCRCSQFSPDASHSDSKLCPSTPSWSKHSIR 422
           K   +   C C Q S +   S S  CP      +  I+
Sbjct: 79  KIWQMERSCMCCQESGEREASVSLFCPKAKPGERKFIK 116


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,148
Number of Sequences: 336
Number of extensions: 2401
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)