Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_M01
(607 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47853| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.41
SB_7863| Best HMM Match : Pentaxin (HMM E-Value=1.8) 31 0.72
SB_23116| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_11563| Best HMM Match : SNF7 (HMM E-Value=0.28) 29 2.2
SB_28721| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_15063| Best HMM Match : Fez1 (HMM E-Value=0.17) 29 2.9
SB_13104| Best HMM Match : Peptidase_C13 (HMM E-Value=1.5e-12) 29 2.9
SB_34187| Best HMM Match : ABC_tran (HMM E-Value=1.49995e-41) 29 3.9
SB_20263| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_39963| Best HMM Match : EGF (HMM E-Value=1.4e-13) 28 5.1
SB_30353| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_30081| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_56832| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_25135| Best HMM Match : VWA (HMM E-Value=2.2) 28 5.1
SB_35625| Best HMM Match : DUF296 (HMM E-Value=0.0053) 28 6.7
SB_21771| Best HMM Match : TP2 (HMM E-Value=0.34) 28 6.7
SB_53633| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_58045| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 27 8.9
SB_50549| Best HMM Match : NblA (HMM E-Value=6.5) 27 8.9
SB_32755| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_32630| Best HMM Match : 7tm_1 (HMM E-Value=4.1e-25) 27 8.9
SB_29963| Best HMM Match : E-MAP-115 (HMM E-Value=1.6) 27 8.9
SB_23517| Best HMM Match : WD40 (HMM E-Value=0) 27 8.9
SB_58543| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_19893| Best HMM Match : Pkinase_Tyr (HMM E-Value=3.2e-14) 27 8.9
>SB_47853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1853
Score = 31.9 bits (69), Expect = 0.41
Identities = 22/62 (35%), Positives = 33/62 (53%)
Frame = +3
Query: 108 PKSHSTHNFNHVDESKDALYHSASSDTADDVARELIYDTNIRHNDRYPEANDVDNLDNEI 287
PK + T N +E K H+ SSD++DD +IYD + +D Y ND ++ D E
Sbjct: 56 PKKNKTKN----EEKKRMRGHTTSSDSSDD-DTNVIYDES--DDDDYSSRNDEEDEDAEE 108
Query: 288 ME 293
+E
Sbjct: 109 VE 110
>SB_7863| Best HMM Match : Pentaxin (HMM E-Value=1.8)
Length = 604
Score = 31.1 bits (67), Expect = 0.72
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +3
Query: 57 TDNAQTASNGDPPDRYIPKSHSTHNFNHVDESKDALYHSASSDTADDVAR-ELIYD-TNI 230
+DN T S D D S H+ N D + +YHS + T + R + Y + I
Sbjct: 512 SDNDYTLSGIDHSDNDYTLSEIDHSDN--DYTLSGIYHSDNDYTLSGIDRSDNDYTLSGI 569
Query: 231 RHNDRYPEANDVDNLDNE 284
H+D Y + +D+ DN+
Sbjct: 570 DHSDNYYTLSGIDHSDND 587
>SB_23116| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 29.9 bits (64), Expect = 1.7
Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Frame = +3
Query: 27 RPSLHQSLIVTDNAQTASNGDPPDRYIPKSHSTHNFNHVDESKDALYHSASSDTADDVAR 206
RP+ + LI D+ + S+ + Y + + N N + + + + +D DD
Sbjct: 88 RPNGTEMLIDNDDNKNDSSNYDNNNYNNDNDNNDNNNKNNNNNNDDDDNNKNDNDDD--- 144
Query: 207 ELIYDTNIRHNDRYPEANDVDNLDNEIMEALTLETGNLPD---LTEEQSSSIDESTRRDE 377
YD N +ND Y + N+ +N D++ + + N D E+ ++ +E +RR
Sbjct: 145 ---YDDNNNNNDDYDDDNNNNNNDDDDEDDDSNNNNNDYDDNKCNREERNNEEERSRRPR 201
Query: 378 FWSEQ 392
+E+
Sbjct: 202 VLTEE 206
>SB_11563| Best HMM Match : SNF7 (HMM E-Value=0.28)
Length = 859
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -2
Query: 519 VPSVGARNSRRTLPIPILNYARRHPPGPNTVSGSDSS 409
VPS RR++ +P +Y RR G N+ SD+S
Sbjct: 418 VPSRSPSTPRRSVTLPAGHYGRRSSAGSNSAPWSDAS 454
>SB_28721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 247
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 87 DPPDRYIPKSHSTH-NFNHVDESKDALYHSASSDTADDVARELIYDTNIRHNDRYPEAND 263
D D + + T+ + N D++ D +Y+ A D DD ++ YD ND + E +D
Sbjct: 186 DNDDNNLDDDYGTYGDDNDDDDNLDDVYYDAYCDD-DDNLDDVNYDAYGDDNDDHDENDD 244
Query: 264 VD 269
VD
Sbjct: 245 VD 246
>SB_15063| Best HMM Match : Fez1 (HMM E-Value=0.17)
Length = 444
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 255 ANDVDNLD-NEIMEALTLETGNLPDLTEEQSSSIDESTRRDEFWSEQLSVENLNYLNRIL 431
AN +N + E + L+ + N + E+Q S I++ +R E W E+L E Y +
Sbjct: 280 ANSSNNTEMEETITKLSQQLDNYRHIVEQQESLIEDDSRMCEEW-ERLQQERALYEKQKK 338
Query: 432 CLDQE 446
D+E
Sbjct: 339 SFDEE 343
>SB_13104| Best HMM Match : Peptidase_C13 (HMM E-Value=1.5e-12)
Length = 281
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 417 LNRILCLDQEGVDGHSLESEWEASGENCEHLHLVLKYW 530
+NR+L E V+ + E+ G+NC H + V +W
Sbjct: 166 MNRVLMRSAEPVNYNCYEAAIHTFGQNCFHFNEVSSFW 203
>SB_34187| Best HMM Match : ABC_tran (HMM E-Value=1.49995e-41)
Length = 1515
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/42 (26%), Positives = 26/42 (61%)
Frame = -3
Query: 203 GDVVGRVRTSAVIQRVFRFVDVIEVMRRMALRYISIRWVTIA 78
G+V+ +RT ++ + + D + ++RR +RYI I+ + ++
Sbjct: 376 GEVIAGIRTVKMLALEWFYRDKVNMLRRKEMRYIRIKSLVLS 417
>SB_20263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/74 (24%), Positives = 31/74 (41%)
Frame = +3
Query: 60 DNAQTASNGDPPDRYIPKSHSTHNFNHVDESKDALYHSASSDTADDVARELIYDTNIRHN 239
DN N D D Y ++ +N N+ + + S ++ +D + N +N
Sbjct: 80 DNNDNNDNNDNNDNYDNNGNNDNNDNYNNYDNNGNNDSNDNNGNNDNNDNYDNNDNYDNN 139
Query: 240 DRYPEANDVDNLDN 281
D Y ++ DN DN
Sbjct: 140 DNYNNNDNNDNNDN 153
>SB_39963| Best HMM Match : EGF (HMM E-Value=1.4e-13)
Length = 3035
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -1
Query: 520 STKCRCSQFSPDASHSDSKLCPSTPSWSKHSIRF 419
ST CS + P S + +CP+ P S +IR+
Sbjct: 1264 STPYNCSSYGPANLPSTALMCPAYPLLSSQAIRY 1297
>SB_30353| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1553
Score = 28.3 bits (60), Expect = 5.1
Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Frame = +3
Query: 186 TADDVARELIYDTNIRHNDRYPEANDVDNLDNEIMEALTLETGNLPDLTEEQSSSIDEST 365
TA+D L + RH+ N++ +LD EA + T + + S D S
Sbjct: 1235 TAEDQRDALANEVAERHDTIVKLKNELGSLDTRYREATSSLTHRNSVIQRMRDESKDISE 1294
Query: 366 RRDEFWSEQLSVEN-LNYLNRILCLDQEGVDGHSLES 473
+ +E QL +E+ LN N+ + +E ++ + S
Sbjct: 1295 QAEESKHRQLELESKLNAANKRISNLEERLEKKQMSS 1331
>SB_30081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 273 LDNEIMEALTLETGNLPDLTEEQSSSIDES 362
L NE+ E ++L GN P T ++S + +S
Sbjct: 299 LTNEVAETISLAHGNCPQTTADRSVGVSDS 328
>SB_56832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 189
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = -2
Query: 549 RDKLESSST*VPSVGARNSRRTLPIPILNYARRHPPG---PNTVSGSDSSNSQ 400
+ + + SS VP+ RN+R+ IL+ A +H G P T+ S+ SN Q
Sbjct: 43 KPRKQLSSEEVPNESQRNTRKWKSSEILDNANQHGHGGFEPRTLQLSNGSNGQ 95
>SB_25135| Best HMM Match : VWA (HMM E-Value=2.2)
Length = 233
Score = 28.3 bits (60), Expect = 5.1
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = +3
Query: 60 DNAQTASNGD-PPDRYIPKSHSTHNFNHVDESKDALYHSASSDTADDVARELIYDTNIRH 236
DN +N D D + + N + V+ + D + D ADDV ++ +
Sbjct: 136 DNDDVKNNDDFDNDDDVHIADDVDNADDVNNADDVDNNDDDVDNADDVNNA----DDVDN 191
Query: 237 NDRYPEANDVDNLDNE 284
ND A+D DN DN+
Sbjct: 192 NDDVNNADDADNNDND 207
>SB_35625| Best HMM Match : DUF296 (HMM E-Value=0.0053)
Length = 885
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = +3
Query: 132 FNHVDESKDALYHSASSDTADDVARELIYDTNIRHNDRYPEANDV-DNLDNEIMEALTLE 308
F+H ++ D +SSD DD L + + ND D D D+E+
Sbjct: 47 FSHYGDNNDLTPKESSSDEEDDSEEPLTPQSEVSKNDNGDNKPDTPDEEDDEVCRKYFEG 106
Query: 309 TGNLP 323
G+ P
Sbjct: 107 LGSTP 111
>SB_21771| Best HMM Match : TP2 (HMM E-Value=0.34)
Length = 1691
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/67 (26%), Positives = 34/67 (50%)
Frame = +3
Query: 69 QTASNGDPPDRYIPKSHSTHNFNHVDESKDALYHSASSDTADDVARELIYDTNIRHNDRY 248
QT ++ D P + KS S+ H+ E + HS+++DT +++ E D + + +
Sbjct: 1402 QTKNDVDLPAVPLVKSGSSLQNLHLGEESRSPEHSSNADTHNELDAESPTDDLNKADSWW 1461
Query: 249 PEANDVD 269
P +D D
Sbjct: 1462 PSDDDFD 1468
>SB_53633| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 607
Score = 27.9 bits (59), Expect = 6.7
Identities = 23/74 (31%), Positives = 41/74 (55%)
Frame = -3
Query: 281 VVQIIDVVRFRISIVMPDIRIVDEFAGDVVGRVRTSAVIQRVFRFVDVIEVMRRMALRYI 102
VV+++ VVRF + + +R+V VV VR ++ RV RF+ V+ ++R +
Sbjct: 144 VVRLVRVVRFMRVVRL--VRVVRLMR--VVRFVRVVRLV-RVVRFMRVVRLVRVVDSLVR 198
Query: 101 SIRWVTIARCLRVI 60
+R V + R +RV+
Sbjct: 199 VVRLVRVVRLVRVV 212
>SB_58045| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 1752
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 264 VDNLDNEIMEALTLETGNLPDLTEEQSSSIDESTRRDEFWSEQLS 398
VD NEI + E G PD+ E S + ++ R++ S ++S
Sbjct: 584 VDRYGNEIQGTRSSEQGTCPDVLPEDSLTACQAKRQESLNSGEVS 628
>SB_50549| Best HMM Match : NblA (HMM E-Value=6.5)
Length = 128
Score = 27.5 bits (58), Expect = 8.9
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +3
Query: 354 DESTRRDEFWSEQLSVENLNYLNR--ILCLDQEGVDGHSLESEWEASGENCEHLHLVLK 524
D+S EFW + LS+E N NR + D+E + + W E C L +VLK
Sbjct: 13 DKSRTSREFWMKFLSIEQENEGNRNPVNIFDEEKDVRYYGDPRWRFV-ETCLQLLIVLK 70
>SB_32755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 701
Score = 27.5 bits (58), Expect = 8.9
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Frame = +3
Query: 81 NGDPPDRYIPKSHSTHNFNHVDESKDALYHSASSDTADDVARELIYDTNIRHNDRYPEAN 260
NGD R I + + N + DES++ D D+ +R + R+ D E+
Sbjct: 510 NGDDASRSINGKNESRNIANTDESRNI-------DGTDE-SRNIEGTNESRNIDGLNESR 561
Query: 261 DVDNLDNEIMEALTLETGNLPDLTEEQS-SSIDES 362
++D + + A T E+ N+ E ++ ++ DES
Sbjct: 562 NIDGTNESHIIASTDESRNIDGQNESRNIANTDES 596
>SB_32630| Best HMM Match : 7tm_1 (HMM E-Value=4.1e-25)
Length = 474
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 479 PFRF*TMPVDTLLVQTQYPVQIVQILNGQLFRPE 378
P+ +D LL+ YPV I IL G+ +PE
Sbjct: 44 PYMLNMAVLDALLILFGYPVSINAILTGRRLKPE 77
>SB_29963| Best HMM Match : E-MAP-115 (HMM E-Value=1.6)
Length = 238
Score = 27.5 bits (58), Expect = 8.9
Identities = 20/73 (27%), Positives = 37/73 (50%)
Frame = +3
Query: 177 SSDTADDVARELIYDTNIRHNDRYPEANDVDNLDNEIMEALTLETGNLPDLTEEQSSSID 356
S D DD + L T + N++ ND + +D+ + ++ T+E L + EE S ID
Sbjct: 139 SDDEGDDEKKALKAHT--QKNEQLVPTND-EVVDDTVNDSETIEKQQLVERIEEYESQID 195
Query: 357 ESTRRDEFWSEQL 395
+ + E +++L
Sbjct: 196 DFKSKLEKANKEL 208
>SB_23517| Best HMM Match : WD40 (HMM E-Value=0)
Length = 860
Score = 27.5 bits (58), Expect = 8.9
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Frame = +3
Query: 249 PEANDVDNLDNEIMEALTLETGNLPDLTEEQSSSIDESTRRDEFW---SEQLSVENLNYL 419
PE VD D++ E D EE+ ++ ++ + E ++Q++ EN+N
Sbjct: 267 PEDEGVDEEDDDKDEQKHDIADKDEDEEEEEEAAGEKHENKSELKQSNTDQINNENINVK 326
Query: 420 NRILCLDQEGVDGHSLESEWEASGENCEHLHLV 518
+ L + H ESE + E+ EH+ ++
Sbjct: 327 SNTDSLTRVDQVVHKAESEDTKTSEDVEHVTII 359
>SB_58543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 530
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 312 GNLPDLTEEQSSSIDESTRRDEFWSEQLSVENLNYLNRI 428
G L D+ ++ +DE + D WS ++S N L+R+
Sbjct: 78 GVLDDVGPKRGGVLDEEVKWDNEWSPKISFSNSLLLDRV 116
>SB_19893| Best HMM Match : Pkinase_Tyr (HMM E-Value=3.2e-14)
Length = 443
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/66 (22%), Positives = 30/66 (45%)
Frame = +3
Query: 246 YPEANDVDNLDNEIMEALTLETGNLPDLTEEQSSSIDESTRRDEFWSEQLSVENLNYLNR 425
YP++N D ++ L E QSS++ + R + W+E+ + ++
Sbjct: 358 YPQSNSTKCYDRRVITFLDSE-----QRLSNQSSNLAQVCRTGQLWNEKYREQKIDQSKV 412
Query: 426 ILCLDQ 443
+L +DQ
Sbjct: 413 LLVIDQ 418
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,949,786
Number of Sequences: 59808
Number of extensions: 342659
Number of successful extensions: 1237
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1093
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1232
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1475788250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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