Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_L24
(563 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 287 3e-78
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 150 7e-37
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 147 5e-36
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 142 2e-34
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 130 8e-31
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 128 4e-30
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 2e-24
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 107 8e-24
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 103 1e-22
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 100 7e-22
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 100 7e-22
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 98 5e-21
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 1e-20
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 92 2e-19
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 91 8e-19
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 79 2e-15
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 77 8e-15
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 71 5e-13
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 71 5e-13
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 70 2e-12
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 2e-12
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 69 4e-12
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 67 1e-11
SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6) 60 2e-09
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 58 5e-09
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 57 9e-09
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 54 8e-08
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 8e-08
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 52 3e-07
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 8e-07
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 50 1e-06
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 5e-06
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 43 2e-04
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 42 3e-04
SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_53656| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.023
SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27) 33 0.12
SB_55048| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8) 31 0.49
SB_11957| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0) 29 2.6
SB_17925| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_50927| Best HMM Match : DEAD (HMM E-Value=3.2e-06) 29 3.5
SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_29257| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21) 27 8.0
SB_8363| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 287 bits (705), Expect = 3e-78
Identities = 133/182 (73%), Positives = 153/182 (84%)
Frame = +1
Query: 1 YILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPK 180
+ILP IVHIN+QP ++ GDGPI LVL PTRELAQQ+Q+VA G +R+TC++GGAPK
Sbjct: 113 FILPGIVHINHQPLLQPGDGPIVLVLCPTRELAQQVQEVAYSVGKHCKLRSTCIYGGAPK 172
Query: 181 REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIID 360
Q R+LERGVEI IATPGRLID LE TNL+RCTYLVLDEADRMLDMGFEPQIR IID
Sbjct: 173 GPQIRELERGVEICIATPGRLIDMLESRKTNLRRCTYLVLDEADRMLDMGFEPQIRTIID 232
Query: 361 QIRPDRQTLMWSATWPKEVRKLAEDYLGDYVQINIGSLQLSANHNILQIVDVCQEHEKEN 540
QIRPDRQTLMWSATWPKEV+ LA D+L DYV I +GSL L+ANH ILQIVDVC++HEKE+
Sbjct: 233 QIRPDRQTLMWSATWPKEVQGLAHDFLSDYVHITVGSLGLTANHKILQIVDVCEDHEKEH 292
Query: 541 KL 546
+
Sbjct: 293 NV 294
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 150 bits (364), Expect = 7e-37
Identities = 88/196 (44%), Positives = 113/196 (57%), Gaps = 15/196 (7%)
Frame = +1
Query: 1 YILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPK 180
Y P + P I G IA+V+ PTRELA QI + +F + +R CV+GG
Sbjct: 125 YEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELAIQIHRECKKFCKPNNLRCVCVYGGTGI 184
Query: 181 REQARDLERGVEIVIATPGRLIDFLEKG---TTNLQRCTYLVLDEADRMLDMGFEPQIRK 351
EQ +L+RG EI++ TPGR+ID L TN QRCTYLVLDEADRM DMGFEPQI K
Sbjct: 185 SEQIAELKRGAEIIVCTPGRMIDMLTANNGRVTNCQRCTYLVLDEADRMFDMGFEPQITK 244
Query: 352 --------IIDQIRPDRQTLMWSATWPKEVRKLAEDYLGDYVQINIGSLQL---SANHNI 498
IID IRPDRQT+M+SAT+P+++ LA L ++I +G + N+
Sbjct: 245 IRYPKVMRIIDCIRPDRQTVMFSATFPRQMEALARKILDKPIEIQVGGRSVVCSDVEQNV 304
Query: 499 -LQIVDVCQEHEKENK 543
L + D E E E K
Sbjct: 305 ALGLQDSDDEAEAEEK 320
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 147 bits (357), Expect = 5e-36
Identities = 73/170 (42%), Positives = 112/170 (65%), Gaps = 4/170 (2%)
Frame = +1
Query: 61 PIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 240
P A+ +APTRELA QI A +F + + +R +GG Q R L+ G +++ TPGR
Sbjct: 789 PQAMCIAPTRELANQIYLEARKFAHGTMLRPVVCYGGVSVSHQLRQLQSGCNLLVGTPGR 848
Query: 241 LIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQI----RPDRQTLMWSATWP 408
L DF+EKG +L+ +L+LDEADRMLDMGFEP IR+I++ + + +RQTLM+SAT+P
Sbjct: 849 LTDFIEKGKVSLKGLQFLILDEADRMLDMGFEPAIRRIVESMGMPDKSERQTLMFSATFP 908
Query: 409 KEVRKLAEDYLGDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLL 558
+E+++LA D+L DY+ + +G + +I Q V ++EK ++L +L
Sbjct: 909 EEIQRLAGDFLNDYLFLTVGRVG-GTTSDIEQTVIEVTDNEKRDRLTQIL 957
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 142 bits (343), Expect = 2e-34
Identities = 77/158 (48%), Positives = 98/158 (62%)
Frame = +1
Query: 1 YILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPK 180
++ PA+VHI +QP ++ GDGPI L+ APTREL QQI A FG + + VFGG K
Sbjct: 571 FLWPALVHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFGKAYNIHVVAVFGGGNK 630
Query: 181 REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIID 360
EQ++ L+ G EIV+ATPGRLID ++ TNL R TYLV DEADRM DMGF
Sbjct: 631 YEQSKALQEGAEIVVATPGRLIDHVKAKATNLHRVTYLVFDEADRMFDMGF--------- 681
Query: 361 QIRPDRQTLMWSATWPKEVRKLAEDYLGDYVQINIGSL 474
L++SAT+ K+V L D L D V++ IG L
Sbjct: 682 -------ALLFSATFKKKVEHLCRDILVDPVRVVIGEL 712
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 130 bits (314), Expect = 8e-31
Identities = 75/174 (43%), Positives = 104/174 (59%), Gaps = 5/174 (2%)
Frame = +1
Query: 52 GDGPIALVLAPT-RELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIA 228
G G A L P + + +F S R V+GGA Q R+L+R +++A
Sbjct: 922 GSGKTAAFLIPILSRIYMEGPPAPPDFSYRSLCRPCVVYGGADIGSQLRELDRNCHLLVA 981
Query: 229 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQ-IRPD---RQTLMWS 396
TPGRL+D +++G L +LVLDEADRMLDMGFEPQIR+I+DQ P RQTLM+S
Sbjct: 982 TPGRLVDMMDRGRVGLDSIRFLVLDEADRMLDMGFEPQIRRIVDQDSMPKTGIRQTLMFS 1041
Query: 397 ATWPKEVRKLAEDYLGDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLL 558
AT+PKE++ LA D+L +Y+ + +G + S + NI Q V E +K + L LL
Sbjct: 1042 ATFPKEIQMLARDFLENYIFLAVGKVG-STSENITQKVVWVDEFDKRSFLLDLL 1094
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 128 bits (308), Expect = 4e-30
Identities = 75/191 (39%), Positives = 111/191 (58%), Gaps = 5/191 (2%)
Frame = +1
Query: 1 YILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPK 180
Y+LP + + Q P+AL +APTRELA+QI A +F + + ++ +GG
Sbjct: 533 YMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFSDHTPIKVCVCYGGVSV 592
Query: 181 REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIID 360
QA LERG ++ TPGRL DF+ + L +L+LDEADRMLD+GF P I K+I+
Sbjct: 593 PYQASQLERGCHFLVGTPGRLQDFVSREKIYLGSIQHLILDEADRMLDLGFGPDIHKLIE 652
Query: 361 Q----IRPDRQTLMWSATWPKEVRKLAEDYL-GDYVQINIGSLQLSANHNILQIVDVCQE 525
+ + RQTLM+SAT+P E++ LA +L DY+ + +G + N +I Q V
Sbjct: 653 ESNMTAKESRQTLMFSATFPDEIQHLAGSFLKPDYLFLAVGRVG-GTNLDITQHVITVNG 711
Query: 526 HEKENKLNVLL 558
EK +KL+ +L
Sbjct: 712 SEKRDKLHEIL 722
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 109 bits (261), Expect = 2e-24
Identities = 55/131 (41%), Positives = 77/131 (58%)
Frame = +1
Query: 67 ALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 246
ALVLAPTRELAQQIQ+V G+ +V+ GG RE LE GV +V+ TPGR+
Sbjct: 162 ALVLAPTRELAQQIQKVVLALGDYMHVKCHACIGGTNVREDRMKLEEGVHVVVGTPGRVF 221
Query: 247 DFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKL 426
D + +G N + VLDEAD ML GF+ QI + ++ Q ++ SAT P +V ++
Sbjct: 222 DMINRGVLNTRDIKLFVLDEADEMLSRGFKDQIYDVFTRLPTSVQVVLLSATMPTDVLEV 281
Query: 427 AEDYLGDYVQI 459
++ D V+I
Sbjct: 282 TNKFMRDVVRI 292
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 107 bits (256), Expect = 8e-24
Identities = 56/138 (40%), Positives = 87/138 (63%), Gaps = 6/138 (4%)
Frame = +1
Query: 46 RRGDGPIALVLAPTRELAQQIQQVASEFGN-SSYVRNTCVFGGAPKREQARDLERGVEIV 222
+RG P LV+APTRELA+Q V +EF N S + C++GG P Q + G++++
Sbjct: 143 KRGRAPKVLVMAPTRELAKQ---VGNEFENLKSNLEVYCIYGGMPYEPQENAINSGLDVL 199
Query: 223 IATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKII----DQIRPDR-QTL 387
+ TPGR++DF+ +GT +L + ++VLDE DRMLDMGF + +++ + R D+ QTL
Sbjct: 200 VGTPGRILDFMRQGTLDLSKLKHVVLDEVDRMLDMGFAESVEEVLAASYAEDREDKPQTL 259
Query: 388 MWSATWPKEVRKLAEDYL 441
++SAT P A+ Y+
Sbjct: 260 LFSATLPPWAVNTAKKYM 277
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 103 bits (246), Expect = 1e-22
Identities = 75/207 (36%), Positives = 103/207 (49%), Gaps = 25/207 (12%)
Frame = +1
Query: 1 YILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF------------GNSSY 144
Y LP + + + P GD P+AL+L PTREL QQ+ SE N S
Sbjct: 126 YSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQVFMNVSEMLDVIRCPGNPGPSNQSV 185
Query: 145 VRNT----------CVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYL 294
+ +T V GG P Q L G ++V+ATPGRL+D L + TYL
Sbjct: 186 IYDTQQFTARYKAVAVCGGVPVSTQTIALREGADVVVATPGRLLD--------LYKITYL 237
Query: 295 VLDEADRMLDMGFEPQIRKIIDQIRPD---RQTLMWSATWPKEVRKLAEDYLGDYVQINI 465
V+DE DRML MG E Q+RKI+ RQTL+WSAT P+ + +LA + + + I +
Sbjct: 238 VMDEPDRMLGMGMEEQLRKIVGLATGTSRARQTLLWSATLPESLERLARSAVLNPITIQV 297
Query: 466 GSLQLSANHNILQIVDVCQEHEKENKL 546
G L A ++ Q V ++K KL
Sbjct: 298 GPGGLIA-PSVQQNVVFLYHYQKPQKL 323
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 100 bits (240), Expect = 7e-22
Identities = 58/172 (33%), Positives = 91/172 (52%), Gaps = 7/172 (4%)
Frame = +1
Query: 67 ALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERG-------VEIVI 225
ALVL PTRELA Q Q+ E G + GG ++ L V +++
Sbjct: 118 ALVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTSLKDDILRLYNKDIFVHVVVHVIV 177
Query: 226 ATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATW 405
ATPGR++D ++K ++ +C LV+DEAD++L M F+ + +II + +RQ L++SAT+
Sbjct: 178 ATPGRVLDLMKKKLADMSKCQMLVMDEADKLLSMDFKKMLEQIIKHLPENRQILLFSATF 237
Query: 406 PKEVRKLAEDYLGDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQ 561
P VR E +L +IN+ + H + Q +E +K + LN L Q
Sbjct: 238 PISVRDFKEKHLRKPYEINL--MDELTLHGVTQYYAFVEEKQKVHCLNTLFQ 287
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 100 bits (240), Expect = 7e-22
Identities = 58/172 (33%), Positives = 91/172 (52%), Gaps = 7/172 (4%)
Frame = +1
Query: 67 ALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERG-------VEIVI 225
ALVL PTRELA Q Q+ E G + GG ++ L V +++
Sbjct: 118 ALVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTSLKDDILRLYNKDIFVHVVVHVIV 177
Query: 226 ATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATW 405
ATPGR++D ++K ++ +C LV+DEAD++L M F+ + +II + +RQ L++SAT+
Sbjct: 178 ATPGRVLDLMKKKLADMSKCQMLVMDEADKLLSMDFKKMLEQIIKHLPENRQILLFSATF 237
Query: 406 PKEVRKLAEDYLGDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQ 561
P VR E +L +IN+ + H + Q +E +K + LN L Q
Sbjct: 238 PISVRDFKEKHLRKPYEINL--MDELTLHGVTQYYAFVEEKQKVHCLNTLFQ 287
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 97.9 bits (233), Expect = 5e-21
Identities = 61/137 (44%), Positives = 83/137 (60%), Gaps = 4/137 (2%)
Frame = +1
Query: 55 DGPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAP-KREQARDLERGVEIVIAT 231
DG ALV++PTRELA Q +V + GN + + GG K EQ R ++ IV+ T
Sbjct: 121 DGLGALVISPTRELAYQTFEVLVKIGNKHDLSAGLIIGGKDLKNEQKRIMK--TNIVVCT 178
Query: 232 PGRLIDFLEKGTTNLQRCT---YLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSAT 402
PGRL+ +++ T N CT LVLDEADR+LDMGF P + II+ + +RQTL++SAT
Sbjct: 179 PGRLLQHMDE-TPNFD-CTSLQILVLDEADRILDMGFAPTLNAIIENLPSERQTLLYSAT 236
Query: 403 WPKEVRKLAEDYLGDYV 453
+ V+ LA L YV
Sbjct: 237 QTRSVKDLARLSLQSYV 253
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 96.7 bits (230), Expect = 1e-20
Identities = 52/133 (39%), Positives = 74/133 (55%)
Frame = +1
Query: 61 PIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 240
P ALVL+PTRELA QIQ+V G+ V+ GG E R L+ G IV TPGR
Sbjct: 66 PQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIVSGTPGR 125
Query: 241 LIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVR 420
+ D + + + LVLDEAD ML+ GF+ QI + + P Q ++ SAT P E+
Sbjct: 126 VFDMIRRRNLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLLSATLPHEIL 185
Query: 421 KLAEDYLGDYVQI 459
++ ++ D ++I
Sbjct: 186 EMTSKFMTDPIRI 198
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 92.3 bits (219), Expect = 2e-19
Identities = 51/145 (35%), Positives = 88/145 (60%), Gaps = 1/145 (0%)
Frame = +1
Query: 1 YILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPK 180
+++P +V + + + +G ++++PTREL+ Q VA + + GG +
Sbjct: 626 FLVP-VVELLYKLQFKTRNGTGVIIISPTRELSLQTYGVARDLLKHHNFTYGIIMGGVNR 684
Query: 181 REQARDLERGVEIVIATPGRLIDFLEKGTTNL-QRCTYLVLDEADRMLDMGFEPQIRKII 357
+ +A L++GV ++IATPGRL+D L+ L + LV+DEADR+L++GFE ++R+II
Sbjct: 685 KAEAERLQKGVNLLIATPGRLLDHLQNTQGFLYKNLQCLVIDEADRILEIGFEEEMRQII 744
Query: 358 DQIRPDRQTLMWSATWPKEVRKLAE 432
+ RQT+++SAT K V LA+
Sbjct: 745 RILPSKRQTVLFSATQTKNVEDLAK 769
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 90.6 bits (215), Expect = 8e-19
Identities = 50/116 (43%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Frame = +1
Query: 58 GPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 237
G A+VL PTRELA QI G ++ + GG +QA L +VIATPG
Sbjct: 75 GIFAVVLTPTRELAFQIADQFKVLGRPIGLKEAVIVGGLDMMKQALSLANKPHVVIATPG 134
Query: 238 RLIDFLEK-GTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSAT 402
RL D ++ T NL++ +LVLDEADR+LD F ++ I D + RQTL++SAT
Sbjct: 135 RLADHIKSTDTLNLKKIQFLVLDEADRLLDPSFGDDLKVIFDAVPEKRQTLLFSAT 190
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 79.4 bits (187), Expect = 2e-15
Identities = 39/120 (32%), Positives = 72/120 (60%)
Frame = +1
Query: 202 ERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQ 381
E GV++++ATPGR+++ + + +L V+DE D ML +GFE Q+++I++++ RQ
Sbjct: 253 EMGVQVIVATPGRMVEIISRQAVDLTHVIGCVVDEVDTMLQLGFEQQVQQILERLSNRRQ 312
Query: 382 TLMWSATWPKEVRKLAEDYLGDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQ 561
T+++SAT P + +A L V I+ GS L + Q++ +E K+ +L +L+
Sbjct: 313 TMLFSATIPPSIEAMASRLLNAPVFISAGSPSLPTK-AVKQLILWVEEKSKKKQLFSILK 371
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 77.4 bits (182), Expect = 8e-15
Identities = 45/94 (47%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Frame = +1
Query: 67 ALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 246
AL+L PTRELA QI + G+ V+ + GG QA L + I+IATPGRLI
Sbjct: 35 ALILTPTRELAFQISEQCEALGSGIGVKCAVIVGGIDMMSQALMLAKKPHIIIATPGRLI 94
Query: 247 DFLE--KGTTNLQRCTYLVLDEADRMLDMGFEPQ 342
D LE KG +L+ YLV+DEADR+L+M FE +
Sbjct: 95 DHLENTKG-FSLRTLKYLVMDEADRILNMDFEKE 127
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 71.3 bits (167), Expect = 5e-13
Identities = 34/80 (42%), Positives = 53/80 (66%)
Frame = +1
Query: 271 NLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLGDY 450
N+ YLVLDEADRM+DMGFE +R I + RQTL++SAT PK+++ A+ L
Sbjct: 13 NVSPYRYLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSALVKP 72
Query: 451 VQINIGSLQLSANHNILQIV 510
V +N+G +A+ +++Q++
Sbjct: 73 VTVNVGRAG-AASLDVIQVL 91
>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 212
Score = 71.3 bits (167), Expect = 5e-13
Identities = 34/80 (42%), Positives = 53/80 (66%)
Frame = +1
Query: 271 NLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLGDY 450
N+ YLVLDEADRM+DMGFE +R I + RQTL++SAT PK+++ A+ L
Sbjct: 13 NVSPYRYLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSALVKP 72
Query: 451 VQINIGSLQLSANHNILQIV 510
V +N+G +A+ +++Q++
Sbjct: 73 VTVNVGRAG-AASLDVIQVL 91
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 69.7 bits (163), Expect = 2e-12
Identities = 40/134 (29%), Positives = 71/134 (52%), Gaps = 3/134 (2%)
Frame = +1
Query: 70 LVLAPTRELAQQIQQVASEFGNSSYVRNTC-VFGGAPKREQARDLERGVEIVIATPGRLI 246
++L PTRE+A Q++ V G Y C VF G E+ + + I + TPGR+
Sbjct: 85 IILTPTREIAVQVKDVICAIG-CHYDGLACKVFIGGISLEEDKKALKSCHIAVGTPGRVK 143
Query: 247 DFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKL 426
+E+ + +LDEAD++LD F+ QI I + ++Q + +SAT+P+ +
Sbjct: 144 YLIEQKYLKTESVRMFILDEADKLLDESFQQQINWIFSALPENKQMMAFSATYPEVLANH 203
Query: 427 AEDYLGD--YVQIN 462
+ Y+ + +V++N
Sbjct: 204 LKKYMTEPTFVRLN 217
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 69.3 bits (162), Expect = 2e-12
Identities = 32/70 (45%), Positives = 49/70 (70%)
Frame = +1
Query: 325 MGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLGDYVQINIGSLQLSANHNILQ 504
MGFEP+I+KI+ IRPDRQT+M SATWP V+++A+ Y+ D V++ +G L L N+++
Sbjct: 1 MGFEPEIKKILLDIRPDRQTVMTSATWPPGVQRMADQYMTDPVRVFVGCLDL----NVIE 56
Query: 505 IVDVCQEHEK 534
++ EK
Sbjct: 57 FIEGMAPGEK 66
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 68.5 bits (160), Expect = 4e-12
Identities = 35/102 (34%), Positives = 56/102 (54%)
Frame = +1
Query: 61 PIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 240
P A ++ P RELA QI + A + + R+ + GG ++ DLE V++++ATPG
Sbjct: 456 PRACIVVPARELATQILKTAKSLCHHARFRSVGLIGGRKQKWMRDDLESPVDLLVATPGT 515
Query: 241 LIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQI 366
L+ + +K T+LV+DEAD M D F+ +I+ I
Sbjct: 516 LLKYRQKDRLFFSDLTHLVIDEADTMFDASFKSLTMEILHTI 557
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 66.9 bits (156), Expect = 1e-11
Identities = 52/162 (32%), Positives = 87/162 (53%), Gaps = 5/162 (3%)
Frame = +1
Query: 61 PIALVLAPTRELAQQIQQVASEFG-NSSYVR-NTCVFGGA-PKREQARDLERGVEIVIAT 231
P + L+PT ELA+Q +VA G + +++ N V G P+ ++ D I+I T
Sbjct: 174 PQVICLSPTYELARQTGKVAEAMGKHCPHIKINYAVRGNQFPRGQKCTD-----HIIIGT 228
Query: 232 PGRLIDFLEKGTT-NLQRCTYLVLDEADRMLDM-GFEPQIRKIIDQIRPDRQTLMWSATW 405
PG L+D++ K ++ + VLDEAD M+ + G + Q +I + D Q L++SAT+
Sbjct: 229 PGTLLDWIRKSKCFEPRKVSVFVLDEADIMIALQGHQDQSIRIHKSLHKDCQVLLFSATY 288
Query: 406 PKEVRKLAEDYLGDYVQINIGSLQLSANHNILQIVDVCQEHE 531
++V K AE + + + I + + S + NI Q VC+ E
Sbjct: 289 DEDVMKFAETVVPNPIIIRLRREEESLD-NIKQYYVVCKNSE 329
>SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6)
Length = 127
Score = 59.7 bits (138), Expect = 2e-09
Identities = 30/71 (42%), Positives = 50/71 (70%)
Frame = +1
Query: 292 LVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLGDYVQINIGS 471
LVLDEADRMLDMGF IR+++ ++ RQ L++SAT+ +++ LAE L + ++I + +
Sbjct: 7 LVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEV-A 65
Query: 472 LQLSANHNILQ 504
+ +A+ +LQ
Sbjct: 66 RRNTASDQVLQ 76
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 58.0 bits (134), Expect = 5e-09
Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 11/189 (5%)
Frame = +1
Query: 1 YILPAIVHINNQPPIRRG---DGPIALVLAPTRELAQQIQQVASEFGNSSYVR-NTCVFG 168
Y P + + P + G G A+V++PTRELAQQI + R +
Sbjct: 183 YTTPTPIQMQATPLMAHGPKKSGFRAVVVSPTRELAQQIYREFCHLAKGCAFRIHVLTKA 242
Query: 169 GAPKREQARDLERGVEIVIATPGRLIDFL--EKGTTNLQRCTYLVLDEADRMLDM---GF 333
A + +I++ TP RL+ L E L +L+LDEAD++ + GF
Sbjct: 243 NASTNTFGAKSSKRFDILVTTPNRLVHLLTQEPPGIELHNVEWLILDEADKLFEEGKDGF 302
Query: 334 EPQIRKIIDQI-RPDRQTLMWSATWPKEVRKLAEDYLGDYVQINIGSLQLSANHNILQ-I 507
QI I +PD ++SAT + + A +L ++V++ +G ++ SA + Q +
Sbjct: 303 REQIATIYQACNKPDIHRGLFSATLSNGIEEWAGLHLDNHVRVTVG-IRNSATATVDQEL 361
Query: 508 VDVCQEHEK 534
+ V QE K
Sbjct: 362 LFVGQESGK 370
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 57.2 bits (132), Expect = 9e-09
Identities = 48/151 (31%), Positives = 77/151 (50%), Gaps = 4/151 (2%)
Frame = +1
Query: 1 YILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFG 168
+ +P +V I P I R + GP AL+LAPTRELAQQI++ +FG +R V G
Sbjct: 155 FAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEEEILKFGRPLGIRTVSVIG 214
Query: 169 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 348
GA R ++ G E + ++++ L +N++ + D + MG +
Sbjct: 215 GAD-----RMIDMGFEPEVQ---KILEHLP--VSNVKPDSEDSEDPEHLLTHMGKDKY-- 262
Query: 349 KIIDQIRPDRQTLMWSATWPKEVRKLAEDYL 441
RQT+M++AT P +V +LA++YL
Sbjct: 263 ---------RQTVMFTATMPPQVERLAKNYL 284
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 54.0 bits (124), Expect = 8e-08
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Frame = +1
Query: 55 DGPIA-LVLAPTRELAQQIQQVASEFGN-SSYVRNTCVFGGAPKREQARDLERGV-EIVI 225
DG ++ LV+ TRELA QI + F S ++ FGG ++ + L+ IV+
Sbjct: 113 DGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKKDQQTLKTNCPHIVV 172
Query: 226 ATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 324
TPGR++ + T NL+ + +LDE D+ML+
Sbjct: 173 GTPGRILALTREKTLNLKHAKHFILDECDKMLE 205
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 54.0 bits (124), Expect = 8e-08
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Frame = +1
Query: 55 DGPIA-LVLAPTRELAQQIQQVASEFGN-SSYVRNTCVFGGAPKREQARDLERGV-EIVI 225
DG ++ LV+ TRELA QI + F S ++ FGG ++ + L+ IV+
Sbjct: 113 DGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKKDQQTLKTNCPHIVV 172
Query: 226 ATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 324
TPGR++ + T NL+ + +LDE D+ML+
Sbjct: 173 GTPGRILALTREKTLNLKHAKHFILDECDKMLE 205
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 52.0 bits (119), Expect = 3e-07
Identities = 29/61 (47%), Positives = 35/61 (57%)
Frame = +1
Query: 61 PIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 240
P ALVL+PTRELA QIQ+V G+ V+ GG E R L+ G IV TPGR
Sbjct: 4 PQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIVSGTPGR 63
Query: 241 L 243
+
Sbjct: 64 V 64
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 50.8 bits (116), Expect = 8e-07
Identities = 26/70 (37%), Positives = 43/70 (61%)
Frame = +1
Query: 64 IALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRL 243
+AL++APTRELA Q++ + + V+ + GG +Q R L++ EIV+ATPGRL
Sbjct: 220 LALIMAPTRELALQVKDHLVKAAKYTSVKVAAIVGGMAAPKQQRLLKQRPEIVVATPGRL 279
Query: 244 IDFLEKGTTN 273
+ + + T+
Sbjct: 280 WELISQVFTH 289
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +1
Query: 211 VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQI 366
V +V+ + EK +N+Q YLV+DEADRM++ G ++ I++ I
Sbjct: 316 VVVVVVVVDTSVTNQEKHVSNIQLLRYLVIDEADRMVEQGHYEELSSILELI 367
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 50.0 bits (114), Expect = 1e-06
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Frame = +1
Query: 1 YILPAIVHINNQPPIRR---GDGPIALVLAPTRELAQQIQQVASEF-GNSSYVRNTCVFG 168
Y+LP I I + +GP+ L+L + ++ V + N R +FG
Sbjct: 241 YLLPIIHQITESSVYQELPLANGPLVLILCTNWQNTARVYGVCEDLIRNRRRTRVQMIFG 300
Query: 169 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 348
G + ++ L G E+++ATP + L++ T+L R ++V D+AD ML F +I+
Sbjct: 301 GGAEEDRIVPLINGCEVLVATPPCFLRMLKRCYTSLDRLCHVVFDDAD-MLAEYFTAEIK 359
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 48.0 bits (109), Expect = 5e-06
Identities = 29/83 (34%), Positives = 44/83 (53%)
Frame = +1
Query: 67 ALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 246
AL+L+PTRELA Q Q+ E G + ++++ + GG + V+ATPGR +
Sbjct: 354 ALILSPTRELALQTQKFIKELGRFTGLKSSVILGG--------------DSVVATPGRFL 399
Query: 247 DFLEKGTTNLQRCTYLVLDEADR 315
+ + L Y+V DEADR
Sbjct: 400 HVVMEMELKLSSVEYVVFDEADR 422
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/52 (40%), Positives = 31/52 (59%)
Frame = +1
Query: 211 VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQI 366
V+IV TPG+L DF+ +L + + +LDEAD +L G I KI ++I
Sbjct: 136 VDIVTGTPGKLNDFITTDKISLHQVKFFILDEADGLLAQGNNDLIMKIYNKI 187
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 42.3 bits (95), Expect = 3e-04
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = +1
Query: 52 GDGPIALVLAPTRELAQQ-IQQVASEFGNSSYVRNTCVFGGAPKREQA-RDLERGVEIVI 225
G G +++ PTRELA Q + +V+ G+ S V + ++E+ +D IVI
Sbjct: 223 GRGYGTIIVVPTRELASQMLYEVSRLLGDKSIVASFVSGVDLSRQEKLLKDSLHPPRIVI 282
Query: 226 ATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 321
TP RL + +++ QR +V+DE D+ L
Sbjct: 283 GTPKRLWEIVQEHEHLFQRTKRIVIDEVDKTL 314
>SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 45
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +1
Query: 151 NTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKG 264
+ C+ GG RE LE GV +V+ TPGR+ D + +G
Sbjct: 6 HACI-GGTNVREDRMKLEEGVHVVVGTPGRVFDMINRG 42
>SB_53656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 51
Score = 35.9 bits (79), Expect = 0.023
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +1
Query: 256 EKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQI 366
E+ +N+Q YLV+DEADRM++ G ++ I++ I
Sbjct: 2 EEHVSNVQLLRYLVIDEADRMVEQGHYEELSSILELI 38
>SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27)
Length = 331
Score = 33.5 bits (73), Expect = 0.12
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Frame = +1
Query: 325 MGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLGDYVQINIGSLQLSANHNILQ 504
MGFE I I+ + R+T ++SAT EV L L + V++ + +L+ N+ +
Sbjct: 1 MGFEASINTILGYLPKQRRTGLFSATQTDEVEALVRAGLRNPVRVTVRE-KLTKTKNVQR 59
Query: 505 IVD-------VCQEHEKENKLNVLLQ 561
+C+ HEK ++L L+
Sbjct: 60 TPSTLQNFYLICRSHEKFSQLVAFLK 85
>SB_55048| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 27
Score = 33.1 bits (72), Expect = 0.16
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +1
Query: 196 DLERGVEIVIATPGRLIDFL 255
+L+RG EI++ TPGR+ID L
Sbjct: 3 ELKRGAEIIVCTPGRMIDML 22
>SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8)
Length = 210
Score = 31.5 bits (68), Expect = 0.49
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 292 LVLDEADRMLDMGFEPQIRKIIDQIRPDRQ 381
LVLDEAD ML+ GF+ QI + + P Q
Sbjct: 39 LVLDEADEMLNKGFKEQIYDVYRYLPPATQ 68
>SB_11957| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 332
Score = 29.5 bits (63), Expect = 2.0
Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 4/83 (4%)
Frame = +1
Query: 265 TTNLQRCTYLVLDEAD----RMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAE 432
TT LQ Y L E D + + P I K+++ + W TW K KL
Sbjct: 235 TTVLQVMGYEQLKEGDLVAVNVANYDKIPCISKVVELRDQEFVIKWWKGTWLKSWEKLPS 294
Query: 433 DYLGDYVQINIGSLQLSANHNIL 501
Y G+ + G +HN+L
Sbjct: 295 QYAGNSCVLFRGQYCQYRSHNLL 317
>SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1310
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 274 LQRCTYLVLDEADRMLDMGFEPQIRKII 357
LQRC LVLDEA +D + Q++++I
Sbjct: 1219 LQRCKVLVLDEATANVDYRTDRQVQQLI 1246
>SB_17925| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1075
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 274 LQRCTYLVLDEADRMLDMGFEPQIRKII 357
LQRC LVLDEA +D + Q++++I
Sbjct: 984 LQRCKVLVLDEATANVDYRTDRQVQQLI 1011
>SB_50927| Best HMM Match : DEAD (HMM E-Value=3.2e-06)
Length = 368
Score = 28.7 bits (61), Expect = 3.5
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +1
Query: 217 IVIATPGRLIDFLEKGTTNLQRCTYLVLDEA-DRMLDMGFEPQIRKIIDQIRPDRQTLMW 393
++ T G L+ + E +T L +++V+DE +R + F + + + RPD + ++
Sbjct: 72 LLYCTTGILLRYFESDST-LAGVSHVVVDEVHERTEESDFLMMVLRDLIMERPDLRVILM 130
Query: 394 SATWPKEVRKLAEDYLGDYVQINI 465
SAT KL +Y D I+I
Sbjct: 131 SATLDS---KLFSEYFYDAPVIHI 151
>SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1937
Score = 27.9 bits (59), Expect = 6.1
Identities = 8/19 (42%), Positives = 16/19 (84%)
Frame = +2
Query: 323 IWVLSHKLGKLSTKYALIG 379
+WVL HK+G ++T++ ++G
Sbjct: 1840 LWVLIHKVGVMATRFCVLG 1858
>SB_29257| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 494
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -2
Query: 208 LFPNHGPVLF*GHLQTHMYYEHKMNCQILKQPAVFVEQV 92
L P HG + H + +Y+ + + Q+LK+ VF+E+V
Sbjct: 67 LTPEHGVLNGIRHWVDNHFYDFERDAQLLKKLQVFLEEV 105
>SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21)
Length = 1728
Score = 27.5 bits (58), Expect = 8.0
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 1/120 (0%)
Frame = +1
Query: 76 LAPTREL-AQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDF 252
+APT+ L AQQI+ G +T G + +L R + TP L +
Sbjct: 163 MAPTKPLVAQQIEACYKIMGIPQ--TDTAEMTGNMAPTKRENLWRTKRVFFLTPQVLQND 220
Query: 253 LEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAE 432
L +G+ LV+DEA + L Q+ + I + + L SAT +++ + +
Sbjct: 221 LSRGSCAAADVVLLVVDEAHKALGNHSYCQVVREILSYTTNFRVLALSATPGDDIKAVQQ 280
>SB_8363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 776
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 384 SYVVCNMAKRSKETCRGLFRRLCPN*YWITSTICKS 491
SY+VC + CR + RL N + T+C+S
Sbjct: 430 SYIVCRSISYTSSVCRSVIHRLSAN---RSKTVCRS 462
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,877,416
Number of Sequences: 59808
Number of extensions: 369645
Number of successful extensions: 869
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1325051197
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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