Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_L23
(455 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0721 - 10677286-10678018,10679293-10679373,10682516-106826... 30 0.77
12_02_0219 + 15822050-15824896 30 1.0
01_07_0009 - 40397276-40397534,40397637-40398745,40398834-403989... 29 2.3
03_05_0517 - 25118232-25118730,25119002-25119273 28 3.1
03_02_0269 + 7001891-7002212,7003598-7004037 28 3.1
12_02_0216 + 15804110-15804284,15804341-15804351 28 4.1
04_04_1420 + 33441260-33443704 28 4.1
11_04_0321 - 16359390-16359539,16359674-16359746,16360448-163608... 27 5.4
01_06_0051 + 25988439-25989068,25989445-25989693,25989952-259900... 27 5.4
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322... 27 7.2
07_01_1139 - 10684647-10685837,10685877-10686251,10686351-106865... 27 7.2
11_01_0474 - 3666236-3668050 27 9.5
04_03_0904 + 20717005-20718087 27 9.5
>03_02_0721 -
10677286-10678018,10679293-10679373,10682516-10682645,
10682969-10683101
Length = 358
Score = 30.3 bits (65), Expect = 0.77
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +1
Query: 100 PDYNPGQVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGP 231
P+ +P + SD V+ +P+ SQP+NG SG GP
Sbjct: 204 PESSPRRAQSDEARSGSVVVDPEEPSSQPNNGSSGGGGGTPDGP 247
>12_02_0219 + 15822050-15824896
Length = 948
Score = 29.9 bits (64), Expect = 1.0
Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 8 DTIRQ*KLSC-FSSSPYWPWLPQTECTWSIITLIIIQARFHRT 133
D +R+ ++ C F+ P WPWL +++ +++ FH T
Sbjct: 272 DPLRKHEMHCRFTQGPPWPWLAVASSYGTLVISLLVGYIFHFT 314
>01_07_0009 -
40397276-40397534,40397637-40398745,40398834-40398932,
40399043-40399272,40399534-40399585,40399679-40399865,
40399987-40400193,40400283-40400449,40400804-40401094,
40401166-40401636
Length = 1023
Score = 28.7 bits (61), Expect = 2.3
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Frame = +2
Query: 8 DTIRQ*KLSC-FSSSPYWPWLPQTECTWSIITLI----IIQARFHRTAIV 142
D R+ ++ C F P WPWL T +++ + I QA HR A V
Sbjct: 369 DPSRKHEMHCRFEKKPPWPWLAITSSFGTLVIALLTGHIFQATVHRIAKV 418
>03_05_0517 - 25118232-25118730,25119002-25119273
Length = 256
Score = 28.3 bits (60), Expect = 3.1
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +1
Query: 166 DPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPKRY 276
D FF++ P GN T P VD P P + +
Sbjct: 37 DWFFTRKGESPQGNISKEETAPTGVDVTDPGRPGRAF 73
>03_02_0269 + 7001891-7002212,7003598-7004037
Length = 253
Score = 28.3 bits (60), Expect = 3.1
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -2
Query: 301 SHHGREGCRIAWVDNWDD*NRR 236
+ H R+ R+AW D W D +R+
Sbjct: 62 TEHARQRMRVAWADGWVDGSRK 83
>12_02_0216 + 15804110-15804284,15804341-15804351
Length = 61
Score = 27.9 bits (59), Expect = 4.1
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +1
Query: 112 PGQVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAF 237
P P+ +H V FF+ SN SGNY + G F
Sbjct: 11 PSGSPAPPYKNHTVAGADGWFFNATSNTTSGNYSDWAAGETF 52
>04_04_1420 + 33441260-33443704
Length = 814
Score = 27.9 bits (59), Expect = 4.1
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -3
Query: 135 AVRWNLAWIIIRVMIDHVHSVCGSHG 58
A RW++ W+ + +VH +CGS+G
Sbjct: 275 AGRWHVTWVAVGRQC-YVHGLCGSNG 299
>11_04_0321 -
16359390-16359539,16359674-16359746,16360448-16360845,
16360919-16362673,16362751-16362861,16363745-16363962,
16364088-16364196
Length = 937
Score = 27.5 bits (58), Expect = 5.4
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1
Query: 259 YPPKRYDNPLARGGK 303
YPPKRY NP+ G+
Sbjct: 859 YPPKRYSNPVGPAGR 873
>01_06_0051 +
25988439-25989068,25989445-25989693,25989952-25990074,
25990246-25990464
Length = 406
Score = 27.5 bits (58), Expect = 5.4
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Frame = -3
Query: 291 GERVVVSLGWIIGM-IEIDERRSSAYGFIISARTV*WLREEXXXXXXXXXVTIAVRWNLA 115
G++V+V GM + +D R A ++ TV L E +RW
Sbjct: 177 GKKVLVVGCGNSGMEVSLDLCRHGAKPSMVVRNTVHVLPREMFGLSTFGIAMALLRWLPV 236
Query: 114 WIIIRVMIDHVHSVCGSHGQYG 49
++ R ++ H + G+ GQ+G
Sbjct: 237 QLVDRFLLTAAHLILGNTGQFG 258
>08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,
3220080-3223195,3223303-3223561,3223665-3223951,
3224029-3224364,3224463-3224604,3224690-3224910,
3224990-3225151,3225242-3225400,3225488-3225787,
3226306-3226569,3227370-3227453
Length = 1855
Score = 27.1 bits (57), Expect = 7.2
Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = +1
Query: 97 NPDYNPGQVPSDGNSDHVVIANPDPFFS--QPSNGPSGNYEPISTG 228
+P Y+ S + P P +S P+ PSG+Y P + G
Sbjct: 1787 SPSYSQPSPSYSPTSPYTTSGGPSPDYSPTSPNYSPSGSYSPTAPG 1832
>07_01_1139 -
10684647-10685837,10685877-10686251,10686351-10686534,
10686699-10686895
Length = 648
Score = 27.1 bits (57), Expect = 7.2
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +1
Query: 100 PDYNPGQVPSDGNSDHVVIANPDPFFSQPSNGPSGNYE 213
P N G V D S V +A PF+S+P+ + + +
Sbjct: 21 PQSNMGDVDFDLKSSLVTMAQASPFYSKPNEDANAHLQ 58
>11_01_0474 - 3666236-3668050
Length = 604
Score = 26.6 bits (56), Expect = 9.5
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -1
Query: 179 EKKGSGFAITTWSLLPSDGTW 117
+ S F I TW+L SD TW
Sbjct: 348 DHSSSAFVINTWTLRTSDMTW 368
>04_03_0904 + 20717005-20718087
Length = 360
Score = 26.6 bits (56), Expect = 9.5
Identities = 17/62 (27%), Positives = 24/62 (38%)
Frame = +1
Query: 100 PDYNPGQVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPKRYD 279
P Y P P+ + + P + QP P+ Y P T P++ PN PP
Sbjct: 176 PSYKPQPKPTP--TPYTPTPTPPSYKPQPKPTPTP-YTPTPTPPSYKPQPKPNPPPTYKP 232
Query: 280 NP 285
P
Sbjct: 233 QP 234
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,886,361
Number of Sequences: 37544
Number of extensions: 219761
Number of successful extensions: 580
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 580
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 895500300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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