Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_L23
         (455 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_51717| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   5.6  
SB_30667| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   5.6  
SB_52413| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   5.6  
SB_20719| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   5.6  
SB_11641| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-33)                 27   5.6  
SB_10450| Best HMM Match : Peptidase_C5 (HMM E-Value=1.1)              27   5.6  
SB_44915| Best HMM Match : VWA (HMM E-Value=0)                         27   7.4  
SB_13163| Best HMM Match : VWA (HMM E-Value=2.3e-32)                   27   7.4  
SB_39378| Best HMM Match : VWA (HMM E-Value=0)                         27   7.4  
SB_48207| Best HMM Match : Peptidase_C5 (HMM E-Value=0.33)             27   9.7  
SB_8894| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   9.7  
SB_4764| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   9.7  
SB_42815| Best HMM Match : rve (HMM E-Value=0.00022)                   27   9.7  
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.7  

>SB_51717| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 799

 Score = 27.5 bits (58), Expect = 5.6
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
 Frame = +1

Query: 103 DYNPGQVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAFVD-FNHPNYPPKRY 276
           D  P  +P DGN D   I N D     PS+ P  ++  +   P   + ++   +PP  Y
Sbjct: 27  DRLPTTIPEDGNGDAAYIVNVD-----PSDKPGSHWLAVYFTPDHCEWWDSFGFPPSAY 80


>SB_30667| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 108

 Score = 27.5 bits (58), Expect = 5.6
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
 Frame = +1

Query: 103 DYNPGQVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAFVD-FNHPNYPPKRY 276
           D  P  +P DGN D   I N D     PS+ P  ++  +   P   + ++   +PP  Y
Sbjct: 27  DRLPTTIPEDGNGDAAYIVNVD-----PSDKPGSHWLAVYFTPDHCEWWDSFGFPPSAY 80


>SB_52413| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 838

 Score = 27.5 bits (58), Expect = 5.6
 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
 Frame = +1

Query: 94  HNPDYNPGQVPSDGNSDHVVI---ANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNY 261
           H P YN   V      D +V+    +P P+  Q  +G   N  P +  P F +F H NY
Sbjct: 150 HPPPYNE-IVGKQNKKDKLVLDHYRHPPPYREQRLSGEMSNLYPGNFSPEFYNFLH-NY 206


>SB_20719| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 245

 Score = 27.5 bits (58), Expect = 5.6
 Identities = 18/55 (32%), Positives = 24/55 (43%)
 Frame = +1

Query: 112 PGQVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPKRY 276
           P  +P DGN     IAN D     PSN P  ++  +    A V+     +PP  Y
Sbjct: 84  PTFIPEDGNGCAAYIANVD-----PSNKPGSHWLAVYFTYANVNGESFRFPPHAY 133


>SB_11641| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-33)
          Length = 390

 Score = 27.5 bits (58), Expect = 5.6
 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
 Frame = -2

Query: 334 FKIAYLY--ETFTSHHGREGCRI-AWVD 260
           F++A L   E + SH GREGC+   WVD
Sbjct: 75  FRLAQLLNEENWPSHLGREGCQFWIWVD 102


>SB_10450| Best HMM Match : Peptidase_C5 (HMM E-Value=1.1)
          Length = 245

 Score = 27.5 bits (58), Expect = 5.6
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
 Frame = +1

Query: 103 DYNPGQVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAFVD-FNHPNYPPKRY 276
           D  P  +P DGN D   I N D     PS+ P  ++  +   P   + ++   +PP  Y
Sbjct: 27  DRLPTTIPEDGNGDAAYIVNVD-----PSDKPGSHWLAVYFTPDHCEWWDSFGFPPSAY 80


>SB_44915| Best HMM Match : VWA (HMM E-Value=0)
          Length = 541

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +1

Query: 151 VIANPDPFFSQP-SNGPSGNYEPISTG 228
           VIA PDP  S+P +NG  G   PIS+G
Sbjct: 258 VIAEPDPCLSKPCANG--GTCSPISSG 282


>SB_13163| Best HMM Match : VWA (HMM E-Value=2.3e-32)
          Length = 318

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +1

Query: 151 VIANPDPFFSQP-SNGPSGNYEPISTG 228
           VIA PDP  S+P +NG  G   PIS+G
Sbjct: 54  VIAEPDPCLSKPCANG--GTCSPISSG 78


>SB_39378| Best HMM Match : VWA (HMM E-Value=0)
          Length = 2865

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +1

Query: 151 VIANPDPFFSQP-SNGPSGNYEPISTG 228
           VIA PDP  S+P +NG  G   PIS+G
Sbjct: 409 VIAEPDPCLSKPCANG--GTCSPISSG 433


>SB_48207| Best HMM Match : Peptidase_C5 (HMM E-Value=0.33)
          Length = 184

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
 Frame = +1

Query: 103 DYNPGQVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAFVD-FNHPNYPPKRY 276
           D  P  +P DGN D   I N D     PS+ P  ++  +   P   + ++   +PP  Y
Sbjct: 27  DRLPTIIPEDGNGDAAYIVNVD-----PSDKPGSHWLAVYFTPDHCEWWDSFGFPPSAY 80


>SB_8894| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 162

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +1

Query: 238 VDFNHPNYPPKRYD 279
           VD NHPNY P+ Y+
Sbjct: 32  VDLNHPNYLPETYN 45


>SB_4764| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 193

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 16/48 (33%), Positives = 18/48 (37%)
 Frame = +1

Query: 76  RVHVVDHNPDYNPGQVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPI 219
           RV   D +PD       S G S H V     P      + PS   EPI
Sbjct: 72  RVGGDDASPDDKESLASSQGQSHHTVTRTMSPDIPSTPSSPSPPSEPI 119


>SB_42815| Best HMM Match : rve (HMM E-Value=0.00022)
          Length = 1514

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
 Frame = +1

Query: 103  DYNPGQVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAFVD-FNHPNYPPKRY 276
            D  P  +P DGN D   I N D     PS+ P  ++  +   P   + ++   +PP  Y
Sbjct: 1211 DRLPTIIPEDGNGDAAYIVNVD-----PSDKPGSHWLAVYFTPDHCEWWDSFGFPPSAY 1264


>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 290

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 19/57 (33%), Positives = 20/57 (35%)
 Frame = +1

Query: 97  NPDYNPGQVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPP 267
           NP Y P   P   N        P P +  P N P   Y P    P     N PN PP
Sbjct: 153 NPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPP---YPPPPNPPYPPPPNAPNPPP 206


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,501,073
Number of Sequences: 59808
Number of extensions: 259617
Number of successful extensions: 704
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 703
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 920703675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)