Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_L22
(603 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 23 2.3
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 23 2.3
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 22 5.3
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 22 5.3
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 22 5.3
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 22 5.3
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 5.3
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 5.3
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 5.3
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 5.3
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 21 9.3
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 21 9.3
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 23.0 bits (47), Expect = 2.3
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +3
Query: 450 IATYKPDEKSFLYKNGQIEPITELADTRTRLIAVG 554
I YKPD + YK +I +TE + + + G
Sbjct: 176 IMEYKPDVEEQRYKQVEISQMTEPSSSTKSYVLEG 210
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 23.0 bits (47), Expect = 2.3
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +3
Query: 24 MKYLIFVWLFVFAEGG 71
+KYL+F++ FVFA G
Sbjct: 8 IKYLLFIFNFVFAVCG 23
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 5.3
Identities = 21/115 (18%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Frame = +2
Query: 119 KTSSQERRAQSLPISNRLPDQHNIFQFISRSER*NCSKIRLLQYKNK*IWRNRRNHKWHG 298
++ S++R + R HN + + ER +C + + + + +++N R ++ +G
Sbjct: 2 RSCSRDRNREYRKKDRRYEKLHNEKEKLLE-ERTSCKRYSRSREREQKLYKNEREYRKYG 60
Query: 299 *RCGQYRPQSLSRRQRW-------SLHVRLHYQE---SYKPRYHRL*HMANVFLP 433
+ R ++ + R++ SL +Y +YKP Y+ + ++ + +P
Sbjct: 61 -ETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNNNYKPLYYNINYIEQIPVP 114
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 5.3
Identities = 21/115 (18%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Frame = +2
Query: 119 KTSSQERRAQSLPISNRLPDQHNIFQFISRSER*NCSKIRLLQYKNK*IWRNRRNHKWHG 298
++ S++R + R HN + + ER +C + + + + +++N R ++ +G
Sbjct: 2 RSCSRDRNREYRKKDRRYEKLHNEKEKLLE-ERTSCKRYSRSREREQKLYKNEREYRKYG 60
Query: 299 *RCGQYRPQSLSRRQRW-------SLHVRLHYQE---SYKPRYHRL*HMANVFLP 433
+ R ++ + R++ SL +Y +YKP Y+ + ++ + +P
Sbjct: 61 -ETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNNNYKPLYYNINYIEQIPVP 114
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 5.3
Identities = 21/115 (18%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Frame = +2
Query: 119 KTSSQERRAQSLPISNRLPDQHNIFQFISRSER*NCSKIRLLQYKNK*IWRNRRNHKWHG 298
++ S++R + R HN + + ER +C + + + + +++N R ++ +G
Sbjct: 2 RSCSRDRNREYRKKDRRYEKLHNEKEKLLE-ERTSCKRYSRSREREQKLYKNEREYRKYG 60
Query: 299 *RCGQYRPQSLSRRQRW-------SLHVRLHYQE---SYKPRYHRL*HMANVFLP 433
+ R ++ + R++ SL +Y +YKP Y+ + ++ + +P
Sbjct: 61 -ETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNNNYKPLYYNINYIEQIPVP 114
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 5.3
Identities = 21/115 (18%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Frame = +2
Query: 119 KTSSQERRAQSLPISNRLPDQHNIFQFISRSER*NCSKIRLLQYKNK*IWRNRRNHKWHG 298
++ S++R + R HN + + ER +C + + + + +++N R ++ +G
Sbjct: 2 RSCSRDRNREYRKKDRRYEKLHNEKEKLLE-ERTSCKRYSRSREREQKLYKNEREYRKYG 60
Query: 299 *RCGQYRPQSLSRRQRW-------SLHVRLHYQE---SYKPRYHRL*HMANVFLP 433
+ R ++ + R++ SL +Y +YKP Y+ + ++ + +P
Sbjct: 61 -ETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNNNYKPLYYNINYIEQIPVP 114
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 5.3
Identities = 21/115 (18%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Frame = +2
Query: 119 KTSSQERRAQSLPISNRLPDQHNIFQFISRSER*NCSKIRLLQYKNK*IWRNRRNHKWHG 298
++ S++R + R HN + + ER +C + + + + +++N R ++ +G
Sbjct: 235 RSCSRDRNREYRKKDRRYEKLHNEKEKLLE-ERTSCKRYSRSREREQKLYKNEREYRKYG 293
Query: 299 *RCGQYRPQSLSRRQRW-------SLHVRLHYQE---SYKPRYHRL*HMANVFLP 433
+ R ++ + R++ SL +Y +YKP Y+ + ++ + +P
Sbjct: 294 -ETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNNNYKPLYYNINYIEQIPVP 347
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 5.3
Identities = 21/115 (18%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Frame = +2
Query: 119 KTSSQERRAQSLPISNRLPDQHNIFQFISRSER*NCSKIRLLQYKNK*IWRNRRNHKWHG 298
++ S++R + R HN + + ER +C + + + + +++N R ++ +G
Sbjct: 235 RSCSRDRNREYRKKDRRYEKLHNEKEKLLE-ERTSCKRYSRSREREQKLYKNEREYRKYG 293
Query: 299 *RCGQYRPQSLSRRQRW-------SLHVRLHYQE---SYKPRYHRL*HMANVFLP 433
+ R ++ + R++ SL +Y +YKP Y+ + ++ + +P
Sbjct: 294 -ETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNNNYKPLYYNINYIEQIPVP 347
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 5.3
Identities = 21/115 (18%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Frame = +2
Query: 119 KTSSQERRAQSLPISNRLPDQHNIFQFISRSER*NCSKIRLLQYKNK*IWRNRRNHKWHG 298
++ S++R + R HN + + ER +C + + + + +++N R ++ +G
Sbjct: 235 RSCSRDRNREYRKKDRRYEKLHNEKEKLLE-ERTSCKRYSRSREREQKLYKNEREYRKYG 293
Query: 299 *RCGQYRPQSLSRRQRW-------SLHVRLHYQE---SYKPRYHRL*HMANVFLP 433
+ R ++ + R++ SL +Y +YKP Y+ + ++ + +P
Sbjct: 294 -ETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNNNYKPLYYNINYIEQIPVP 347
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 5.3
Identities = 21/115 (18%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Frame = +2
Query: 119 KTSSQERRAQSLPISNRLPDQHNIFQFISRSER*NCSKIRLLQYKNK*IWRNRRNHKWHG 298
++ S++R + R HN + + ER +C + + + + +++N R ++ +G
Sbjct: 224 RSCSRDRNREYRKKDRRYEKLHNEKEKLLE-ERTSCKRYSRSREREQKLYKNEREYRKYG 282
Query: 299 *RCGQYRPQSLSRRQRW-------SLHVRLHYQE---SYKPRYHRL*HMANVFLP 433
+ R ++ + R++ SL +Y +YKP Y+ + ++ + +P
Sbjct: 283 -ETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNNNYKPLYYNINYIEQIPVP 336
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 21.0 bits (42), Expect = 9.3
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +1
Query: 304 LWTVSTTKFISEAKMEFTRTITLPRKLQT 390
+W + T F+ A +EF T+ R+ +T
Sbjct: 296 IWFLGCTIFLFAAMVEFAFVNTIYRRKKT 324
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 21.0 bits (42), Expect = 9.3
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = +2
Query: 311 QYRPQSLSRRQRWSLHVRLHYQE 379
+Y +S S ++ S+H R+H +E
Sbjct: 123 EYCSKSFSVKENLSVHRRIHTKE 145
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,247
Number of Sequences: 438
Number of extensions: 3750
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -