Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_L19
         (466 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF017647-1|AAC47802.1|  924|Drosophila melanogaster origin recog...    31   0.77 
AY094780-1|AAM11133.1|  924|Drosophila melanogaster LD11626p pro...    31   1.0  
AE013599-441|AAF59236.1|  924|Drosophila melanogaster CG10667-PA...    31   1.0  
AY119166-1|AAM51026.1|  610|Drosophila melanogaster RH29724p pro...    27   9.4  
AY075263-1|AAL68130.1|  561|Drosophila melanogaster AT22518p pro...    27   9.4  
AE014134-1164|AAN10599.1|  561|Drosophila melanogaster CG17378-P...    27   9.4  
AE014134-1163|AAF52436.2|  610|Drosophila melanogaster CG17378-P...    27   9.4  

>AF017647-1|AAC47802.1|  924|Drosophila melanogaster origin
           recognition complex subunit1 protein.
          Length = 924

 Score = 31.1 bits (67), Expect = 0.77
 Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
 Frame = +3

Query: 150 YFWP---PNQRQREDCEVINFKKLNSQEVYQAGNNCYRLNLSSEQSIVM-GTYKNSTGKI 317
           Y WP   P+ +  +D   I+F  L   E ++  +N   L     + IV+ GT K S  +I
Sbjct: 96  YSWPKAIPHNKYDDDEVAIDFS-LEVIEEHRPYDNDVALGAIYRKCIVLEGTSKTSAEEI 154

Query: 318 VNLLYYGKGEVKSLYRSCDRIISKYLFIKINENYVL 425
              L     ++KS   +C   +S+Y F+K+  +Y L
Sbjct: 155 ---LKRHSNKLKST--ACPMFVSRYRFVKVKRSYRL 185


>AY094780-1|AAM11133.1|  924|Drosophila melanogaster LD11626p
           protein.
          Length = 924

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
 Frame = +3

Query: 150 YFWP---PNQRQREDCEVINFKKLNSQEVYQAGNNCYRLNLSSEQSIVM-GTYKNSTGKI 317
           Y WP   P+ +  +D   I+F  L   E ++  +N   L     + IV+ GT K S  +I
Sbjct: 96  YSWPKAIPHNKYDDDEVAIDFS-LEVIEEHRPYDNDVALGAIYRKCIVLEGTSKTSAEEI 154

Query: 318 VNLLYYGKGEVKSLYRSCDRIISKYLFIKINENYVL 425
              L     ++KS   +C   +S+Y F+K+  +Y L
Sbjct: 155 ---LKRHANKLKST--ACPMFVSRYRFVKVKRSYRL 185


>AE013599-441|AAF59236.1|  924|Drosophila melanogaster CG10667-PA
           protein.
          Length = 924

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
 Frame = +3

Query: 150 YFWP---PNQRQREDCEVINFKKLNSQEVYQAGNNCYRLNLSSEQSIVM-GTYKNSTGKI 317
           Y WP   P+ +  +D   I+F  L   E ++  +N   L     + IV+ GT K S  +I
Sbjct: 96  YSWPKAIPHNKYDDDEVAIDFS-LEVIEEHRPYDNDVALGAIYRKCIVLEGTSKTSAEEI 154

Query: 318 VNLLYYGKGEVKSLYRSCDRIISKYLFIKINENYVL 425
              L     ++KS   +C   +S+Y F+K+  +Y L
Sbjct: 155 ---LKRHANKLKST--ACPMFVSRYRFVKVKRSYRL 185


>AY119166-1|AAM51026.1|  610|Drosophila melanogaster RH29724p
           protein.
          Length = 610

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +3

Query: 39  LFCNVNCIRNNEELCLDYYKNDEI 110
           L CN++ +  ++ELCLD+ K + +
Sbjct: 556 LTCNMHSLGTSQELCLDFLKKNVV 579


>AY075263-1|AAL68130.1|  561|Drosophila melanogaster AT22518p
           protein.
          Length = 561

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +3

Query: 39  LFCNVNCIRNNEELCLDYYKNDEI 110
           L CN++ +  ++ELCLD+ K + +
Sbjct: 507 LTCNMHSLGTSQELCLDFLKKNVV 530


>AE014134-1164|AAN10599.1|  561|Drosophila melanogaster CG17378-PB,
           isoform B protein.
          Length = 561

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +3

Query: 39  LFCNVNCIRNNEELCLDYYKNDEI 110
           L CN++ +  ++ELCLD+ K + +
Sbjct: 507 LTCNMHSLGTSQELCLDFLKKNVV 530


>AE014134-1163|AAF52436.2|  610|Drosophila melanogaster CG17378-PA,
           isoform A protein.
          Length = 610

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +3

Query: 39  LFCNVNCIRNNEELCLDYYKNDEI 110
           L CN++ +  ++ELCLD+ K + +
Sbjct: 556 LTCNMHSLGTSQELCLDFLKKNVV 579


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,129,478
Number of Sequences: 53049
Number of extensions: 399007
Number of successful extensions: 903
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 903
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1559812275
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)