Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_L19
(466 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024828-2|AAU87812.1| 462|Caenorhabditis elegans Hypothetical ... 29 1.6
Z83109-1|CAB05513.1| 339|Caenorhabditis elegans Hypothetical pr... 27 5.0
U23177-2|AAA64331.2| 538|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z81479-10|CAB03945.2| 324|Caenorhabditis elegans Hypothetical p... 27 6.6
U29612-4|AAA68803.1| 326|Caenorhabditis elegans Hypothetical pr... 27 6.6
AY552606-1|AAS89253.1| 324|Caenorhabditis elegans heparan sulfa... 27 6.6
AF000191-1|AAB52884.1| 533|Caenorhabditis elegans Hypothetical ... 27 6.6
Z75711-6|CAB00037.3| 387|Caenorhabditis elegans Hypothetical pr... 27 8.8
AF040642-2|AAN73874.2| 411|Caenorhabditis elegans Hypothetical ... 27 8.8
AF000265-6|AAB52944.1| 150|Caenorhabditis elegans Hypothetical ... 27 8.8
>AC024828-2|AAU87812.1| 462|Caenorhabditis elegans Hypothetical
protein Y55F3BL.2 protein.
Length = 462
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +3
Query: 204 KKLNSQEVYQAGNNCYRLNLSSE--QSIVMGTYKNSTGKIVNLLYYGKGEVKSLY 362
KK ++++ +G NC+ S++ + V KNS K+ +++Y K K+L+
Sbjct: 5 KKKTNKKLKNSGKNCFFFQFSAKYLEFSVNFPRKNSKKKLETIIFYEKNVEKTLF 59
>Z83109-1|CAB05513.1| 339|Caenorhabditis elegans Hypothetical
protein F44G3.1 protein.
Length = 339
Score = 27.5 bits (58), Expect = 5.0
Identities = 8/14 (57%), Positives = 13/14 (92%)
Frame = -1
Query: 319 TIFPVLFLYVPITI 278
TI P++F+Y+P+TI
Sbjct: 259 TIIPIIFMYIPVTI 272
>U23177-2|AAA64331.2| 538|Caenorhabditis elegans Hypothetical
protein C56G2.4 protein.
Length = 538
Score = 27.5 bits (58), Expect = 5.0
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 9 MCVQLLALVYLFCNVNCIRNNEELCLDYYK 98
M +Q+L L+ LFC+V + + E C++ K
Sbjct: 1 MNLQILLLLLLFCHVAAVCRDTETCIERVK 30
>Z81479-10|CAB03945.2| 324|Caenorhabditis elegans Hypothetical
protein C34F6.4 protein.
Length = 324
Score = 27.1 bits (57), Expect = 6.6
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 372 DRIISKYLFIKINENYVLGINCSSGG 449
+R++S Y F++ +NY +G+ S G
Sbjct: 134 ERLLSHYYFLRYGDNYRIGLKRSRAG 159
>U29612-4|AAA68803.1| 326|Caenorhabditis elegans Hypothetical
protein C09B8.5 protein.
Length = 326
Score = 27.1 bits (57), Expect = 6.6
Identities = 9/34 (26%), Positives = 19/34 (55%)
Frame = +3
Query: 207 KLNSQEVYQAGNNCYRLNLSSEQSIVMGTYKNST 308
++N ++ G NC +++ E+ +V+ YK T
Sbjct: 254 RINVRKTNWKGRNCLTIDMEGEKELVISWYKTGT 287
>AY552606-1|AAS89253.1| 324|Caenorhabditis elegans heparan sulfate
2O-sulfotransferase protein.
Length = 324
Score = 27.1 bits (57), Expect = 6.6
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 372 DRIISKYLFIKINENYVLGINCSSGG 449
+R++S Y F++ +NY +G+ S G
Sbjct: 134 ERLLSHYYFLRYGDNYRIGLKRSRAG 159
>AF000191-1|AAB52884.1| 533|Caenorhabditis elegans Hypothetical
protein T23C6.3 protein.
Length = 533
Score = 27.1 bits (57), Expect = 6.6
Identities = 14/57 (24%), Positives = 32/57 (56%)
Frame = +3
Query: 261 LSSEQSIVMGTYKNSTGKIVNLLYYGKGEVKSLYRSCDRIISKYLFIKINENYVLGI 431
L SE + +M +K T ++ + + ++KS+ + C +++KY + N+ + +GI
Sbjct: 96 LFSEITAIMRRFKQLTEEMS--VETVEVKIKSMIKDCQEMLTKYTNLDSNDRFNIGI 150
>Z75711-6|CAB00037.3| 387|Caenorhabditis elegans Hypothetical
protein K02B12.8 protein.
Length = 387
Score = 26.6 bits (56), Expect = 8.8
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = +3
Query: 36 YLFCNVNCIRNNEELCLDYYKNDEIYDLNGLLGTTYAVYFWPPNQRQREDCEVINFKKLN 215
++FC C + + +CL KN + L+G + + +YF P + + I KK++
Sbjct: 25 HIFCT-KCAKADLAVCLICKKNVRLVRLDGNISSGIKIYFADPIKMVADSLAKIQ-KKID 82
Query: 216 SQE 224
Q+
Sbjct: 83 FQQ 85
>AF040642-2|AAN73874.2| 411|Caenorhabditis elegans Hypothetical
protein C50D2.9 protein.
Length = 411
Score = 26.6 bits (56), Expect = 8.8
Identities = 26/111 (23%), Positives = 44/111 (39%), Gaps = 1/111 (0%)
Frame = +3
Query: 36 YLFCNVNCIRNNEELCLDYY-KNDEIYDLNGLLGTTYAVYFWPPNQRQREDCEVINFKKL 212
YL+C V I E CL Y +N E Y++ + + F + RQ E K
Sbjct: 260 YLYCGVRVI-GGSETCLKYLEENQEKYNIQVMKRLAVSAAF---HTRQMESAVEQVAKAF 315
Query: 213 NSQEVYQAGNNCYRLNLSSEQSIVMGTYKNSTGKIVNLLYYGKGEVKSLYR 365
+ E+++ N + S G + + K +N + +SL+R
Sbjct: 316 QNVEIHRPVCNVWSNYSGKVMSSKKGDVRGAVAKQINSPVRWEQIQQSLFR 366
>AF000265-6|AAB52944.1| 150|Caenorhabditis elegans Hypothetical
protein C18E3.4 protein.
Length = 150
Score = 26.6 bits (56), Expect = 8.8
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 303 STGKIVNLLYYGKGEVKSLYRSCDRIISKYLFIKINENYVLGINCSS 443
+T + L YYG V S Y S I + F+ I++ +L INC +
Sbjct: 21 TTTTLDELYYYGAECVLSCYVSVVSICNTQQFVVIDKIALLYINCDN 67
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,538,893
Number of Sequences: 27780
Number of extensions: 214806
Number of successful extensions: 595
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 595
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 829055604
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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