Samia BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_L18
         (78 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0726 - 13374061-13374151,13374576-13374787,13374990-133750...    27   2.1  
02_01_0521 + 3768072-3768239,3768280-3768337,3769197-3769659,376...    26   4.8  

>02_02_0726 -
          13374061-13374151,13374576-13374787,13374990-13375002,
          13375318-13375655
          Length = 217

 Score = 27.1 bits (57), Expect = 2.1
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -1

Query: 63 VSAGKRHHRCNCYYVSEHHL 4
          +S  K+H +C+ ++VSE H+
Sbjct: 39 ISNAKKHEQCDLFHVSESHI 58


>02_01_0521 +
           3768072-3768239,3768280-3768337,3769197-3769659,
           3769736-3769990,3770763-3770934,3772260-3772910,
           3773659-3774045,3774123-3774155,3774239-3774307,
           3774388-3774463,3775135-3775223,3775442-3775615,
           3775693-3775821
          Length = 907

 Score = 25.8 bits (54), Expect = 4.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 51  KRHHRCNCYYVSEHHLF 1
           +R H CNC ++  H LF
Sbjct: 529 RRIHHCNCNHIPRHTLF 545


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,712,142
Number of Sequences: 37544
Number of extensions: 22129
Number of successful extensions: 67
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67
length of database: 14,793,348
effective HSP length: 7
effective length of database: 14,530,540
effective search space used: 261549720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)