Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_L17
         (72 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor 1-a...    18   9.6  
AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor 1-a...    18   9.6  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    18   9.6  

>EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor
          1-alpha protein.
          Length = 172

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -2

Query: 65 WPFFATGFFVTAILATEH 12
          W F  + ++VT I A  H
Sbjct: 5  WKFETSKYYVTIIDAPGH 22


>AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor
          1-alpha protein.
          Length = 274

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -2

Query: 65 WPFFATGFFVTAILATEH 12
          W F  + ++VT I A  H
Sbjct: 21 WKFETSKYYVTIIDAPGH 38


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -2

Query: 65  WPFFATGFFVTAILATEH 12
           W F  + ++VT I A  H
Sbjct: 78  WKFETSKYYVTIIDAPGH 95


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.317    0.123    0.355 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,578
Number of Sequences: 438
Number of extensions: 178
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 5
effective length of database: 144,153
effective search space used:  2594754
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (19.0 bits)