Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_L16
(552 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_10214| Best HMM Match : VWA (HMM E-Value=1.30321e-43) 37 0.010
SB_39739| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 37 0.013
SB_13504| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.017
SB_49402| Best HMM Match : WAP (HMM E-Value=8.2e-05) 36 0.022
SB_47033| Best HMM Match : WAP (HMM E-Value=1.8e-38) 36 0.029
SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 35 0.051
SB_4105| Best HMM Match : WAP (HMM E-Value=0.0002) 35 0.051
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.051
SB_42355| Best HMM Match : EGF (HMM E-Value=2.9e-05) 34 0.067
SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.067
SB_12772| Best HMM Match : Thyroglobulin_1 (HMM E-Value=4.4e-05) 33 0.16
SB_6259| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_35802| Best HMM Match : Laminin_EGF (HMM E-Value=0.25) 32 0.36
SB_4451| Best HMM Match : Cornifin (HMM E-Value=0.11) 32 0.36
SB_59417| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.36
SB_40656| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.47
SB_50987| Best HMM Match : DUF1012 (HMM E-Value=0.58) 31 0.63
SB_34621| Best HMM Match : Thyroglobulin_1 (HMM E-Value=4.4e-05) 31 0.63
SB_21661| Best HMM Match : EGF_CA (HMM E-Value=0) 30 1.1
SB_23066| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_59202| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_985| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_16878| Best HMM Match : Keratin_B2 (HMM E-Value=0.19) 30 1.4
SB_27928| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_43785| Best HMM Match : WAP (HMM E-Value=2e-05) 29 2.5
SB_15075| Best HMM Match : Extensin_2 (HMM E-Value=0.39) 29 2.5
SB_48529| Best HMM Match : NADH5_C (HMM E-Value=4.1) 29 3.3
SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_27495| Best HMM Match : VWA (HMM E-Value=0) 29 3.3
SB_18261| Best HMM Match : Cornifin (HMM E-Value=1.6) 29 3.3
SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_14150| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_11826| Best HMM Match : Kazal_1 (HMM E-Value=1.2e-16) 28 4.4
SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 28 5.8
SB_47086| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_22952| Best HMM Match : EGF_2 (HMM E-Value=2e-23) 28 5.8
SB_45570| Best HMM Match : Euplotes_phero (HMM E-Value=2.6) 27 7.7
SB_36411| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0) 27 7.7
SB_24152| Best HMM Match : PKD (HMM E-Value=4.1e-29) 27 7.7
SB_12832| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_135| Best HMM Match : Kazal_1 (HMM E-Value=2.9e-19) 27 7.7
SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0) 27 7.7
SB_6273| Best HMM Match : MAM (HMM E-Value=0) 27 7.7
>SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1887
Score = 37.9 bits (84), Expect = 0.005
Identities = 32/111 (28%), Positives = 44/111 (39%), Gaps = 8/111 (7%)
Frame = +2
Query: 95 AGSCPLPSKVYGCT----PKCVQDYDCKNGKICCSNGCNTKSCTD---TTQHAGAGGNDK 253
+G CP + C+ PKC+ D DC + CCS+GC T CT+ +A G K
Sbjct: 1555 SGYCPSLPREPRCSSRSRPKCLLDSDCPGNQKCCSDGC-TMICTNPDLDIVNAPVRGRRK 1613
Query: 254 YSQSGGTGVYCGNVKCSPFEVCKQDS-ATRRMKCTRA*YKFIILLQAVAID 403
V C C QDS KC R + + Q + I+
Sbjct: 1614 PGICPVMSV--SKAPCPTTNQCSQDSDCPGSQKCCRQHFANCLASQMLCIE 1662
Score = 35.5 bits (78), Expect = 0.029
Identities = 31/102 (30%), Positives = 41/102 (40%), Gaps = 9/102 (8%)
Frame = +2
Query: 74 MVSYTTAAGSCPLPSKVYGC----TPKCVQDYDCKNGKICCSNGCNTKSCTD-----TTQ 226
M+S G+CP ++ C +C D DC + CCSNGC + C D TT
Sbjct: 1672 MLSRLYRPGNCPKLTRPAVCGEVMRTECNYDIDCAGTQKCCSNGCR-RLCADAERATTTS 1730
Query: 227 HAGAGGNDKYSQSGGTGVYCGNVKCSPFEVCKQDSATRRMKC 352
G + Q G Y V+ P V QD T + C
Sbjct: 1731 TRGEKDAEPAFQEGRCPPY-SPVRACPLLV--QDECTCDVDC 1769
Score = 32.7 bits (71), Expect = 0.21
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 143 CVQDYDCKNGKICCSNGCNTKSCTDTTQHA 232
C+ D +C G CCS+GC K C + A
Sbjct: 623 CLSDLECDEGSKCCSDGCKLK-CVQLKRQA 651
Score = 32.7 bits (71), Expect = 0.21
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
Frame = +2
Query: 104 CPLPSKVYGCTPK----CVQDYDCKNGKICCSNGCNTK 205
CP+ ++ C + C+ D DC G CC +GC K
Sbjct: 725 CPVVARPTNCPVRVAMECLSDVDCGTGNKCCYDGCTYK 762
>SB_10214| Best HMM Match : VWA (HMM E-Value=1.30321e-43)
Length = 821
Score = 37.1 bits (82), Expect = 0.010
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 92 AAGSCPLPSKVYGCTPKCVQDYDCKN-GKICCSNGCNTKSCTD 217
A SCP + +C +D DCK G +CC +GC ++C D
Sbjct: 519 APPSCPAEDDL---AHECSEDKDCKTEGDLCCQDGCKQRTCKD 558
>SB_39739| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 1120
Score = 36.7 bits (81), Expect = 0.013
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 131 CTPKCVQDYDCKNGKICCSNGCNTKSCTDTTQHA 232
C C D DC K CCSNGC ++CT + A
Sbjct: 581 CVNYCGTDGDCAGDKKCCSNGCG-RTCTSPVRQA 613
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/52 (30%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Frame = +2
Query: 140 KCVQDYDCKNGKICCSNGCNTKSCTDTT--QHAGAGGNDKYSQSGGTGVYCG 289
KC D DC CC+ C K CT + G + G YCG
Sbjct: 536 KCQYDGDCAGADKCCNTQCG-KICTSAVLKEKTGFCPKRRVDHVGVCVNYCG 586
>SB_13504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4924
Score = 36.3 bits (80), Expect = 0.017
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +2
Query: 104 CPLPSKVYGCTPKCVQDYDCKNGKICCSNGCNTKSCTDTTQHAGAGG 244
CPL + Y C DC G +CC + C T+H A G
Sbjct: 1830 CPLRTPYYTGFTSCKDSSDCGKGAVCCLDMAGRHYCNRITKHGAAKG 1876
>SB_49402| Best HMM Match : WAP (HMM E-Value=8.2e-05)
Length = 192
Score = 35.9 bits (79), Expect = 0.022
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +2
Query: 113 PSKVYGC-TPKCVQDYDCKNGKICCSNGCNTKSCT 214
P K GC C +D C+ K CC N C K CT
Sbjct: 155 PEKPTGCEVSDCDEDSHCEGDKKCCDNYCGAKVCT 189
>SB_47033| Best HMM Match : WAP (HMM E-Value=1.8e-38)
Length = 667
Score = 35.5 bits (78), Expect = 0.029
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = +2
Query: 101 SCPLPSKV-YGCTPK---CVQDYDCKNGKICCSNGCNTKSCTDTTQ 226
+CP+ S++ Y C P C D DC G CCS+ C ++ CT Q
Sbjct: 529 TCPVMSRIPYMCNPTTHACDTDDDCIGGAKCCSDSC-SRRCTAPDQ 573
Score = 35.1 bits (77), Expect = 0.038
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 4/63 (6%)
Frame = +2
Query: 98 GSCPLPSKVYGCTP---KCVQDYDC-KNGKICCSNGCNTKSCTDTTQHAGAGGNDKYSQS 265
G CP+ C P +C D DC + K CC NGC + TQ A K + +
Sbjct: 130 GQCPILEMPEVCNPHAYECNYDVDCWDSDKKCCDNGCTSVCVPPVTQQTTALPTSKRTPT 189
Query: 266 GGT 274
T
Sbjct: 190 PAT 192
Score = 34.7 bits (76), Expect = 0.051
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 128 GCTPKCVQDYDCKNGKICCSNGCNTKSCTDTTQ 226
G +C +D DC K CC +GC + CTD T+
Sbjct: 19 GIFSQCARDNDCPAAKKCCWDGC-YRRCTDVTK 50
Score = 31.5 bits (68), Expect = 0.47
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 140 KCVQDYDCKNGKICCSNGCNTKSCTDTTQHAGAG 241
+C D C G CCS+ CN+K C ++ G G
Sbjct: 80 ECSSDIHCSIGMKCCSDTCNSK-CVESQTLEGIG 112
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 5/37 (13%)
Frame = +2
Query: 101 SCPLPSKVYGCTP-----KCVQDYDCKNGKICCSNGC 196
SCP P+ C KC D DC++ CC +GC
Sbjct: 477 SCPTPTYSAACLDSDAIDKCQTDRDCQDQFKCCFDGC 513
>SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 6725
Score = 34.7 bits (76), Expect = 0.051
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 5/38 (13%)
Frame = +2
Query: 98 GSCPLPSK--VYGCTPK---CVQDYDCKNGKICCSNGC 196
G CP P K C + C +D DCKN CC NGC
Sbjct: 4901 GRCPKPWKGIFRACDRRGDACQKDTDCKNNHKCCFNGC 4938
>SB_4105| Best HMM Match : WAP (HMM E-Value=0.0002)
Length = 428
Score = 34.7 bits (76), Expect = 0.051
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 131 CTPKCVQDYDCKNGKICCSNGCN 199
C C D DC ++CC NGCN
Sbjct: 60 CQHTCQVDNDCPGNQLCCDNGCN 82
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 34.7 bits (76), Expect = 0.051
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 128 GCTPKCVQDYDCKNGKICCSNGCNTKSCT 214
G + +C D DC+ G CCS+GC +CT
Sbjct: 3228 GASDQCASDSDCQTGLKCCSSGC-ILTCT 3255
Score = 31.5 bits (68), Expect = 0.47
Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Frame = +2
Query: 143 CVQDYDCKNGKICCSNGCNTKSCTDTTQHAGAGGNDKYSQSGGTG-VYCGNVKCSPFE-- 313
C D DC + CC +GC+ K C Q + +G + C +CS E
Sbjct: 560 CNSDGDCLDDLKCCHSGCH-KQCVKPNQVVDLSPYATCEANVPSGKISCTCPECSKREDP 618
Query: 314 VCKQDSATRRMKC 352
VC DS T +C
Sbjct: 619 VCGSDSKTYPNEC 631
Score = 31.5 bits (68), Expect = 0.47
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 143 CVQDYDCKNGKICCSNGCNTKSCTDTTQ 226
C +D DC N +CC +GC K C Q
Sbjct: 948 CQKDRDCPNNFMCCDSGC-YKQCVKPNQ 974
>SB_42355| Best HMM Match : EGF (HMM E-Value=2.9e-05)
Length = 241
Score = 34.3 bits (75), Expect = 0.067
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 140 KCVQDYDCKNGKICCSNGCNTKSCTDTTQHAGAGGNDKYSQS 265
+C CKNG C + G N +CT T+ + G +D S S
Sbjct: 159 ECFTGNPCKNGGSCVTAGANAYNCTCTSNYMGKNCDDLKSSS 200
>SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1937
Score = 34.3 bits (75), Expect = 0.067
Identities = 21/71 (29%), Positives = 29/71 (40%)
Frame = +2
Query: 140 KCVQDYDCKNGKICCSNGCNTKSCTDTTQHAGAGGNDKYSQSGGTGVYCGNVKCSPFEVC 319
+C Q+++C K C+N + SCT + G G S CG C F C
Sbjct: 877 ECEQNHECDPLKAVCTNTEGSYSCTCRPGYGGDGRTCTPISS------CGGEVCHQFGEC 930
Query: 320 KQDSATRRMKC 352
D T R +C
Sbjct: 931 VTDDDTGRKRC 941
>SB_12772| Best HMM Match : Thyroglobulin_1 (HMM E-Value=4.4e-05)
Length = 213
Score = 33.1 bits (72), Expect = 0.16
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +2
Query: 98 GSCPLPSKV--YGCTPKCVQDYDCKNGKICCSNGCNTK 205
G CP K GC +C D C+ +CC +GC K
Sbjct: 30 GRCPSTFKAPARGCRYECFSDGQCQPDHVCCVSGCYRK 67
>SB_6259| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 439
Score = 32.7 bits (71), Expect = 0.21
Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 4/49 (8%)
Frame = +2
Query: 89 TAAGSCPLPSKVYGCTP----KCVQDYDCKNGKICCSNGCNTKSCTDTT 223
T G CP C +C D DC CC NGC +CT T
Sbjct: 60 TKNGECPFVESFPACPVLQPNECAVDVDCNETDKCCFNGC-ILTCTPAT 107
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 32.7 bits (71), Expect = 0.21
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 140 KCVQDYDCKNGKICCSNGC 196
+C +D DC+ G+ CC NGC
Sbjct: 1133 RCQRDGDCRQGQQCCFNGC 1151
Score = 31.5 bits (68), Expect = 0.47
Identities = 17/38 (44%), Positives = 18/38 (47%), Gaps = 5/38 (13%)
Frame = +2
Query: 98 GSCPLPSKVYG--CTPK---CVQDYDCKNGKICCSNGC 196
G CP P K C K C +D DC N CC NGC
Sbjct: 894 GKCPKPWKGKDGICDRKGDMCSRDSDCTNDWKCCFNGC 931
Score = 31.1 bits (67), Expect = 0.63
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 134 TPKCVQDYDCKNGKICCSNGCN 199
T C D DC + CC NGCN
Sbjct: 751 TDMCSVDLDCPGKRRCCYNGCN 772
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 5/44 (11%)
Frame = +2
Query: 95 AGSCPLPSKVY--GCTPK---CVQDYDCKNGKICCSNGCNTKSC 211
AG P+P K C + C +D DC+ + CC NGC+ K C
Sbjct: 1221 AGKWPMPWKGLPGACDYRGDMCDKDTDCQMPQKCCFNGCH-KDC 1263
Score = 29.1 bits (62), Expect = 2.5
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 140 KCVQDYDCKNGKICCSNGCNTKSC 211
+C D +C+ + CC NGC K C
Sbjct: 968 QCQSDIECRPNQQCCFNGCQ-KQC 990
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 5/46 (10%)
Frame = +2
Query: 98 GSCPL-----PSKVYGCTPKCVQDYDCKNGKICCSNGCNTKSCTDT 220
G CP+ PS +C D DC + CC +GC C +T
Sbjct: 789 GICPIQDYIDPSLCKSTRDECQTDADCFGRRKCCFSGC-AMECMET 833
Score = 28.7 bits (61), Expect = 3.3
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 140 KCVQDYDCKNGKICCSNGCNTKSC 211
+C D +C+ + CC NGC K C
Sbjct: 1023 QCKSDSECRPNQRCCFNGCQ-KQC 1045
Score = 28.7 bits (61), Expect = 3.3
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 140 KCVQDYDCKNGKICCSNGCNTKSC 211
+C D +C+ + CC NGC K C
Sbjct: 1078 QCQSDSECRPNQQCCFNGCQ-KQC 1100
Score = 28.7 bits (61), Expect = 3.3
Identities = 22/57 (38%), Positives = 24/57 (42%), Gaps = 7/57 (12%)
Frame = +2
Query: 62 TVLMMVSYTTAA--GSCPLPSK-VYGCTPK----CVQDYDCKNGKICCSNGCNTKSC 211
T L +VS A G CP P K + G K C D C CC NGC K C
Sbjct: 1630 TKLTVVSQGACAKLGKCPKPWKGLSGMCDKRGSMCDADDQCPGQHKCCFNGCQ-KDC 1685
>SB_35802| Best HMM Match : Laminin_EGF (HMM E-Value=0.25)
Length = 781
Score = 31.9 bits (69), Expect = 0.36
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = +2
Query: 95 AGSCPLPSKVYGCTPKCVQDYDCKNGKICCSNGCNTKSCTDTTQH 229
A S L GC C ++ C N + CS C+ + TD H
Sbjct: 716 APSSLLELSTCGCKSGCQRNCSCSNNGLSCSKACSCMAGTDCRNH 760
>SB_4451| Best HMM Match : Cornifin (HMM E-Value=0.11)
Length = 1384
Score = 31.9 bits (69), Expect = 0.36
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Frame = +2
Query: 59 FTVLMMVSYTTAAGSCPLPSKVYGCTPKC---VQDYDCKNGKICCSNGCNTKSCTDTTQH 229
FTV + YT AA + P + TP C ++ + + K C N +D+ +
Sbjct: 573 FTVTPTLDYTEAATASPTVEIAFSTTPYCGNRIKHHGGSHSKPYCGNRFKHHGGSDSKPY 632
Query: 230 AGAGGNDKYSQSGGTG--VYCGN 292
G +++ GG+ YCGN
Sbjct: 633 CG----NRFRHHGGSDSKPYCGN 651
>SB_59417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1822
Score = 31.9 bits (69), Expect = 0.36
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
Frame = +2
Query: 104 CPLPSKVYGCTP----KCVQDYDCKNGKICCSNGCNTK 205
CP+ + C+ +C++D DC+ G CC GC K
Sbjct: 273 CPVSASSEVCSAPGVDQCLEDQDCQMGLKCCKVGCERK 310
>SB_40656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 492
Score = 31.5 bits (68), Expect = 0.47
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Frame = +2
Query: 98 GSCPLPSKVYGC---TPKCVQDYDCKNGKICCSNGC 196
G CP C + +C D+DC K CCS+ C
Sbjct: 151 GFCPFIRPPRACASDSDRCQHDWDCPEKKKCCSDSC 186
>SB_50987| Best HMM Match : DUF1012 (HMM E-Value=0.58)
Length = 873
Score = 31.1 bits (67), Expect = 0.63
Identities = 23/99 (23%), Positives = 50/99 (50%)
Frame = +3
Query: 84 IRLLRVAAHCHLKCTDVLLNAYKITTARTARYAVQTDVTQNRAQTPHNMQELVVTINIHN 263
I LL+V + + +++N++K+ + + Y + + ++ + + + IN H
Sbjct: 705 ITLLKVDSLASITYRLLIINSHKVDSLASTTYRLLV-INPHKVDSLASTTCRQLVINSHK 763
Query: 264 LAALVFTVAMLNAVRLKCASRIQLQEG*NVLGLSTNLLY 380
+ +L + V + + L C SRI+LQ+ ++ G LLY
Sbjct: 764 VDSLAYVVPHVPLL-LSC-SRIKLQQAQSLCGFIRKLLY 800
>SB_34621| Best HMM Match : Thyroglobulin_1 (HMM E-Value=4.4e-05)
Length = 129
Score = 31.1 bits (67), Expect = 0.63
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 104 CPLPSKV--YGCTPKCVQDYDCKNGKICCSNGCNTK 205
CP K GC +C D C+ +CC +GC K
Sbjct: 3 CPSTFKAPARGCRYECFSDGQCQPDHVCCVSGCYRK 38
>SB_21661| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1202
Score = 30.3 bits (65), Expect = 1.1
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Frame = +2
Query: 143 CVQDYDCKNGKICCSNGCNTKSC---TDTTQHAGAGGNDKYSQSGGTGVYC-GNVKCSPF 310
CV +CK + +G +C + T G+ + G GV C G CS
Sbjct: 285 CVDINECKTTALALYHGNYAHNCHSDANCTNTKGSFYCTCHVGYSGDGVTCVGEFDCSIM 344
Query: 311 EVCKQDSATRRMKC 352
E K+ ++T RM+C
Sbjct: 345 ERVKKPTSTTRMQC 358
>SB_23066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +2
Query: 137 PKCVQDYDCKNGKICCSNGCNTKSCTD--TTQHAGAGGNDKYSQSGGTGVYCGN 292
P C++D D NG S N C+D T + G GN+ +S +C N
Sbjct: 397 PVCIRDDDDGNGSGSASGSGNGDDCSDPGTLTNGGRHGNN-FSDGQRVSFFCNN 449
>SB_59202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1530
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 5/48 (10%)
Frame = +2
Query: 119 KVYGCTPKCVQDYDCKNGKICCS-----NGCNTKSCTDTTQHAGAGGN 247
++ GC C+ C NGK C+ N C + C Q++G N
Sbjct: 270 RIAGCLYPCMNGGSCINGKCVCAVGFTGNTCEERLCDPPCQNSGTCNN 317
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/60 (30%), Positives = 23/60 (38%)
Frame = +2
Query: 131 CTPKCVQDYDCKNGKICCSNGCNTKSCTDTTQHAGAGGNDKYSQSGGTGVYCGNVKCSPF 310
C P C C NG C+ KSC + + + Q+GGT KC PF
Sbjct: 305 CDPPCQNSGTCNNGTCICTKQYTGKSC-EHGINLVLSSCVPFCQNGGTCSSPNTCKC-PF 362
>SB_985| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 3/26 (11%)
Frame = +2
Query: 143 CVQDYDCK-NGKI--CCSNGCNTKSC 211
C DYDC NG CCSN C C
Sbjct: 56 CSSDYDCNSNGNFLNCCSNSCQWDYC 81
>SB_16878| Best HMM Match : Keratin_B2 (HMM E-Value=0.19)
Length = 413
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 3/26 (11%)
Frame = +2
Query: 143 CVQDYDCK-NGKI--CCSNGCNTKSC 211
C DYDC NG CCSN C C
Sbjct: 252 CSSDYDCNSNGNFLNCCSNSCQWDYC 277
>SB_27928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/65 (24%), Positives = 24/65 (36%)
Frame = +2
Query: 35 SVTMFLSVFTVLMMVSYTTAAGSCPLPSKVYGCTPKCVQDYDCKNGKICCSNGCNTKSCT 214
S T + S + SYT+ S + C Y C C ++ +T S T
Sbjct: 106 STTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTCTTSYTCTTSYTCTTSYTSTTSYT 165
Query: 215 DTTQH 229
TT +
Sbjct: 166 STTSY 170
>SB_43785| Best HMM Match : WAP (HMM E-Value=2e-05)
Length = 103
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 6/59 (10%)
Frame = +2
Query: 38 VTMFLSVFTVLMMVSYTTAAGSCPL--PSKVYGCTPK----CVQDYDCKNGKICCSNGC 196
+T+ L VL + + G CP P C P+ C D +C+ +CC GC
Sbjct: 5 ITLHLVCRRVLFLF-HLARYGKCPAYPPPAPPECPPEAKDECATDGECQGDDVCCVGGC 62
>SB_15075| Best HMM Match : Extensin_2 (HMM E-Value=0.39)
Length = 541
Score = 29.1 bits (62), Expect = 2.5
Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Frame = -1
Query: 261 CEYLSLPPAPACCVVSVHDFV----LHPFEQHILPFLQS*S---CTHLGVHPYTLDGNGQ 103
C+Y+ P C + H + + + + ++ + C H+ HP T+ +
Sbjct: 139 CDYMETHPVTVCNYLETHPAIVCNYMETYPATVCNYMVTHPVTVCDHMETHPATVCDYVK 198
Query: 102 LPAAVVYETIISTVK-TDKNMVTEP 31
P A+VYE I + + N+ T+P
Sbjct: 199 TPPAIVYEYIETDLAIVYDNIETDP 223
>SB_48529| Best HMM Match : NADH5_C (HMM E-Value=4.1)
Length = 246
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +3
Query: 153 ITTARTARYAVQTDVTQNRAQTPHNMQELVVTINIHNLAALVFTVAMLNAV 305
+TT T V T+VT T H EL+VT N+ L V T+ L +
Sbjct: 13 VTTHVTLELTVTTNVTLKLTVTTHITLELIVTTNV-TLKLTVTTLVTLELI 62
>SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6753
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = +2
Query: 155 YDCKNGKICCSNGCNTKSCTDTTQHAGAGGNDKYSQSGGTGVYCGNVKCSP 307
Y CKNG C ++G + +C T+ + G +K T G SP
Sbjct: 3845 YPCKNGGTCTNSG-QSYTCNCTSDYIGEHCEEKIDPCNPTPCQNGGTCASP 3894
>SB_27495| Best HMM Match : VWA (HMM E-Value=0)
Length = 1064
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = +2
Query: 98 GSCPLPSKVYGCTPKCVQDYDCKNGKICCSNGCNTKSC 211
G C P +C D DC ++CC +G SC
Sbjct: 512 GKCRTPDAGDTGGAQCEVDKDCGVDQLCCDDGSGKTSC 549
>SB_18261| Best HMM Match : Cornifin (HMM E-Value=1.6)
Length = 500
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +3
Query: 153 ITTARTARYAVQTDVTQNRAQTPHNMQELVVTINIHNLAALVFTVAMLNAV 305
+TT T V T+VT T H EL+VT N+ L V T+ L +
Sbjct: 357 VTTHVTLELTVATNVTLKLTVTTHITLELIVTTNV-TLKLTVTTLVTLELI 406
>SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1705
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +2
Query: 176 ICCSNG--CNTKSCTDTTQHAGAGGNDKYSQSGGTGVYCGNVKCSPFEVC 319
+C S+G S D T H GAGG+ G +G + + +PF C
Sbjct: 1563 VCESHGPVMAVHSKHDLTNHTGAGGSGTGQSLGSSGSCLESFRPNPFTEC 1612
>SB_14150| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 429
Score = 28.3 bits (60), Expect = 4.4
Identities = 22/62 (35%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Frame = +2
Query: 125 YGCTPKCVQDYDCKNGKICCSN-GCNTKSCTDTTQHAGAGGN--DKYSQSGGTGVYCGNV 295
YGC C +Y C NG C N GC + G GN Y G G CG V
Sbjct: 173 YGCGYGCDGNYGCGNG--CDGNYGCGYGCDGNYGCGYGCDGNYGCGYGCDGNYGCGCGCV 230
Query: 296 KC 301
C
Sbjct: 231 YC 232
>SB_11826| Best HMM Match : Kazal_1 (HMM E-Value=1.2e-16)
Length = 98
Score = 28.3 bits (60), Expect = 4.4
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +2
Query: 284 CGNVKCSPFEVCKQDSATRRMKCTRA 361
C V+C+ ++VC++ + R C RA
Sbjct: 17 CATVRCASYKVCEEVNGIARCVCNRA 42
>SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
Length = 3891
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 113 PSKVYGCTP-KCVQDYDCKNGKICCSNGCNTKSCTDTTQHAGAG 241
P+ + CT C+ + +G C++G + K C T GAG
Sbjct: 2497 PNHTFKCTSGHCIANSSVCDGDTDCADGSDEKDCDLGTSTCGAG 2540
>SB_47086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 27.9 bits (59), Expect = 5.8
Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 5/55 (9%)
Frame = +2
Query: 167 NGKICCSNGC-NTKSC----TDTTQHAGAGGNDKYSQSGGTGVYCGNVKCSPFEV 316
+G+ CC + C K C TT N Q +GV C N C+P EV
Sbjct: 235 HGRKCCGHKCIKAKDCHLFNLSTTARPITRSNTT-RQEHNSGVDCRNSSCTPIEV 288
Score = 27.5 bits (58), Expect = 7.7
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 143 CVQDYDCKNGKICCSNGCNT 202
C +D +CK ++CC N C +
Sbjct: 157 CDRDSNCKPHQVCCDNRCRS 176
>SB_22952| Best HMM Match : EGF_2 (HMM E-Value=2e-23)
Length = 300
Score = 27.9 bits (59), Expect = 5.8
Identities = 24/74 (32%), Positives = 27/74 (36%), Gaps = 5/74 (6%)
Frame = +2
Query: 104 CPLPSKVYGCTPKCVQ-----DYDCKNGKICCSNGCNTKSCTDTTQHAGAGGNDKYSQSG 268
CP YGC+ KC D NG C G ++C D T G G
Sbjct: 89 CPKGYYGYGCSKKCSNCQHGATCDPVNGTCSCQTGWTGENC-DITCSQGRWG----VGCQ 143
Query: 269 GTGVYCGNVKCSPF 310
GT N CSPF
Sbjct: 144 GTCDCKNNATCSPF 157
>SB_45570| Best HMM Match : Euplotes_phero (HMM E-Value=2.6)
Length = 388
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -2
Query: 287 HSKHQCRQIVNIYRYHQLLHVVWCLCTILC 198
H H Y H ++H VWC CT+ C
Sbjct: 339 HMVHHVWCTCTEYSEH-MVHHVWCTCTVTC 367
>SB_36411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 654
Score = 27.5 bits (58), Expect = 7.7
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Frame = +2
Query: 143 CVQDYD-CKNGKICCSNGCNTKSCTDTTQHAGAGG-NDKY---SQSGGTGVYCGNVKCSP 307
CV +YD CK K C+ SC D +G G + Y SG TG+ C C+
Sbjct: 22 CV-NYDVCKCHKDWTGLDCSQNSCADLDYCSGRGSCVNAYRCECNSGWTGISCAVPDCAA 80
Query: 308 FEVC 319
C
Sbjct: 81 VSQC 84
>SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0)
Length = 609
Score = 27.5 bits (58), Expect = 7.7
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 194 CNTKSCTDTTQHAGAGGNDKYSQSGGTGVYCGNVKCSPFEVCKQDSATRRMKCTRA*YKF 373
CN + + GG DK S + CGN CS E ++TR ++C + + F
Sbjct: 70 CNVNGQSRRSLTVSGGGKDKGGNSTWSCPKCGN-PCSAVE-----ASTRFVQCEKCSHFF 123
Query: 374 IIL 382
++L
Sbjct: 124 LVL 126
>SB_24152| Best HMM Match : PKD (HMM E-Value=4.1e-29)
Length = 1130
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = +2
Query: 143 CVQDYDCKNGKICCSNGCNTKSCTDTTQHAGAGGNDKYSQSGGT 274
C +DY GK SN C+ D T+H GGN YS T
Sbjct: 91 CGRDY----GKSGVSNECDRPCSGDNTRHC--GGNSSYSAYNST 128
>SB_12832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1169
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = +2
Query: 161 CKNGKICCSNGCNTKSCTDTTQHAGAGG-NDKYSQSGGTGVYC 286
C G C + +SC T G G N++ Q G YC
Sbjct: 1075 CPQGTFCVTGSYEFQSCNPGTYSKGTGATNNQDCQQCDAGYYC 1117
>SB_135| Best HMM Match : Kazal_1 (HMM E-Value=2.9e-19)
Length = 92
Score = 27.5 bits (58), Expect = 7.7
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +2
Query: 284 CGNVKCSPFEVCKQDSATRRMKCTRA 361
C V+C+ ++VC++ + R C RA
Sbjct: 17 CATVRCAKYKVCEEVNGIVRCVCNRA 42
>SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0)
Length = 960
Score = 27.5 bits (58), Expect = 7.7
Identities = 21/72 (29%), Positives = 25/72 (34%), Gaps = 4/72 (5%)
Frame = +2
Query: 89 TAAGSCPLPSKVYGCTPK--CVQDYDC--KNGKICCSNGCNTKSCTDTTQHAGAGGNDKY 256
T CP Y CT K CV C + G C+ G K C T H G
Sbjct: 208 TCIDECPTGYYGYECTQKCQCVNGASCDRRTGSCNCTVGWIGKFCQQTCPH-NTWGEGYC 266
Query: 257 SQSGGTGVYCGN 292
+ G+Y N
Sbjct: 267 KEECPRGIYGRN 278
>SB_6273| Best HMM Match : MAM (HMM E-Value=0)
Length = 4272
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 95 AGSCPLPSKVYGCTPKCVQDYDCKNGKICCS 187
AG+CP P+ PK VQ CKNG S
Sbjct: 1879 AGNCPAPTPSPSPNPKAVQ---CKNGNYVSS 1906
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,870,902
Number of Sequences: 59808
Number of extensions: 436691
Number of successful extensions: 1235
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1230
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1276425465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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