Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_L16
         (552 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   2.7  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    21   8.3  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   8.3  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    21   8.3  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   8.3  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 107 PLPSKVYGCTPKCVQDYDCKN 169
           P  + +Y C  +C  D DC N
Sbjct: 466 PPGTPIYECNKRCNCDIDCIN 486


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 138 GVHPYTLDGNGQLP 97
           GVH +T  G+G++P
Sbjct: 327 GVHYFTKVGSGEIP 340


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 5/15 (33%), Positives = 13/15 (86%)
 Frame = -1

Query: 219 VSVHDFVLHPFEQHI 175
           +++ +FV++P +QH+
Sbjct: 610 IALSEFVINPHQQHL 624


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +2

Query: 128 GCTPKCVQDYDCK 166
           GC PK +  Y C+
Sbjct: 42  GCVPKPIPSYACR 54


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 266 QIVNIYRYHQLLHVVWCLCTILCY 195
           QI++  R   L+  VW L  ++C+
Sbjct: 175 QIMSPRRARLLVATVWILSFVICF 198


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,805
Number of Sequences: 438
Number of extensions: 3790
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15827139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)