Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_L12
(593 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces pom... 129 3e-31
SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr 2... 98 1e-21
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 88 8e-19
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 70 2e-13
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ... 44 1e-05
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 29 0.68
SPCC1450.03 |||ribonucleoprotein |Schizosaccharomyces pombe|chr ... 27 2.7
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 26 3.6
SPAC6F12.12 |par2|pbp2|protein phosphatase regulatory subunit Pa... 26 4.8
SPAC13A11.01c |rga8|SPAC2F7.18c|GTPase activating protein Rga8 |... 26 4.8
SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces po... 25 6.3
SPBC1734.12c |alg12||dolichyl pyrophosphate Man7GlcNAc2 alpha-1,... 25 8.3
SPBC29A10.15 |orc1|orp1, cdc30|origin recognition complex subuni... 25 8.3
SPBP8B7.15c |||ubiquitin-protein ligase E3 RBBP6 family |Schizos... 25 8.3
>SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 129 bits (311), Expect = 3e-31
Identities = 75/180 (41%), Positives = 99/180 (55%), Gaps = 6/180 (3%)
Frame = +2
Query: 8 EGDQQPDTQPGDVIIVLQQKPHDVFQRNGDDLVMKHEITLTEALCGFEFVVKHLDGRDLL 187
EG+Q P PGDVI V+ QK H F+R+GD L + + L AL G + VV+HLD R L
Sbjct: 229 EGEQAPGIIPGDVIFVIDQKEHPRFKRSGDHLFYEAHVDLLTALAGGQIVVEHLDDRWLT 288
Query: 188 IRHSSGDVIKPGDMKGIQGEGMPQYKNPFEKGNLYIKFDVIFPENNFANEEQLKQIESVL 367
I G+ I+P ++K + G+GM ++ + GNLYI+F V FPE NFA EQL +E L
Sbjct: 289 IPIIPGECIRPNELKVLPGQGMLSQRH-HQPGNLYIRFHVDFPEPNFATPEQLALLEKAL 347
Query: 368 PPRPAFVMPTGDDVEEVNLMEFTASERGR-----GREEAYASDDEEHSHAG-PGVQCAHQ 529
PPR P EE L +E+ R A + D++E G PGVQCA Q
Sbjct: 348 PPRKIESAPKNAHTEECVLATVDPTEKVRIDNNVDPTTATSMDEDEDEEGGHPGVQCAQQ 407
>SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 413
Score = 97.9 bits (233), Expect = 1e-21
Identities = 52/127 (40%), Positives = 73/127 (57%), Gaps = 1/127 (0%)
Frame = +2
Query: 2 RGEGDQQPDTQPGDVIIVLQQKPHDVFQRNGDDLVMKHEITLTEALCGFEFVV-KHLDGR 178
RG D+ PGDVI+ L QKPH VF+R GDDL K +I+L EAL GF V+ LDGR
Sbjct: 239 RGMADEAYGITPGDVILQLHQKPHPVFERLGDDLKAKLKISLAEALTGFNRVILTTLDGR 298
Query: 179 DLLIRHSSGDVIKPGDMKGIQGEGMPQYKNPFEKGNLYIKFDVIFPENNFANEEQLKQIE 358
L G ++ PGD I GEGM + +G+LY++ D+ FP++ +++ +
Sbjct: 299 GLEYVQPIGKILHPGDCLIIPGEGMYKDSKTDLRGDLYLEVDIEFPKDGLIGTTEIEILR 358
Query: 359 SVLPPRP 379
+LP P
Sbjct: 359 DILPSIP 365
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 88.2 bits (209), Expect = 8e-19
Identities = 47/104 (45%), Positives = 64/104 (61%)
Frame = +2
Query: 5 GEGDQQPDTQPGDVIIVLQQKPHDVFQRNGDDLVMKHEITLTEALCGFEFVVKHLDGRDL 184
GEGD++PD D+ VL +KPH VF R+GDDL M+ E++L EAL GF + +DG+ L
Sbjct: 264 GEGDEKPDGTVQDIQFVLAEKPHPVFTRSGDDLRMQVELSLKEALLGFSKQISTIDGKKL 323
Query: 185 LIRHSSGDVIKPGDMKGIQGEGMPQYKNPFEKGNLYIKFDVIFP 316
+ SS +PG G GMP KNP ++GN+ I+ V FP
Sbjct: 324 KV--SSSLPTQPGYEITYPGFGMPLPKNPSQRGNMIIECKVKFP 365
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 70.1 bits (164), Expect = 2e-13
Identities = 37/113 (32%), Positives = 68/113 (60%), Gaps = 7/113 (6%)
Frame = +2
Query: 2 RGEGDQQPDTQPGDVIIVLQQKPHDV-FQRNGDDLVMKHEITLTEALCG-FEFVVKHLDG 175
RG+ D+ P + GD+I++L+ D + R +DL K I++ EAL G ++ ++ LDG
Sbjct: 245 RGKADEIPGMEAGDIIVILEAAGGDYGWTRKDNDLYRKETISVREALLGNWKRKIQKLDG 304
Query: 176 RDLLIRHSSGDVIKPGDMKGIQGEGMPQY-----KNPFEKGNLYIKFDVIFPE 319
+ ++ S+G+V+ PG+ + ++ +GMP Y K G+ YI+++V FP+
Sbjct: 305 SFMEVKRSAGEVVHPGETERVKNQGMPIYNLHKGKTTSAHGSAYIEWEVKFPK 357
>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 528
Score = 44.4 bits (100), Expect = 1e-05
Identities = 31/113 (27%), Positives = 52/113 (46%)
Frame = +2
Query: 8 EGDQQPDTQPGDVIIVLQQKPHDVFQRNGDDLVMKHEITLTEALCGFEFVVKHLDGRDLL 187
+G ++PGD+ + + H F R G ++ +I +T A G V L G ++
Sbjct: 338 KGGPNAKSRPGDLFATIHVRKHPFFVREGTNVTYNAKIPMTTAALGGTLRVPTLTG-NVD 396
Query: 188 IRHSSGDVIKPGDMKGIQGEGMPQYKNPFEKGNLYIKFDVIFPENNFANEEQL 346
+R S G GD + G+G+ + N GN Y+ F+V P+ +E L
Sbjct: 397 LRVSPGT--STGDRITMAGKGIRKV-NTSRYGNFYVNFEVTIPKILSPHERSL 446
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 28.7 bits (61), Expect = 0.68
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 269 PFEKGNLYIKFDVIFPENNFANEEQLKQIESVLPPRPAF 385
PFE LY + D++ + N ++ SV PP +F
Sbjct: 124 PFEYSKLYSQIDMLLRKTNMGRRQETNSKLSVRPPLSSF 162
>SPCC1450.03 |||ribonucleoprotein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 240
Score = 26.6 bits (56), Expect = 2.7
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +2
Query: 290 YIKFDVIFPENNFANEEQLKQIESVLPPRPAFVMP 394
+I D + PE+ +EE+ +++E + P+ FV+P
Sbjct: 197 HIDHDFVIPEDEMLSEEEEQEVEKQILPK--FVVP 229
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 26.2 bits (55), Expect = 3.6
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 314 PENNFANEEQLKQIESVLPPRPAFVMPTG 400
P ++F +QL ++ + LPP + +PTG
Sbjct: 166 PPSSFITAKQLSRLPTPLPPPSSSSLPTG 194
>SPAC6F12.12 |par2|pbp2|protein phosphatase regulatory subunit
Par2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 627
Score = 25.8 bits (54), Expect = 4.8
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -2
Query: 358 LYLLKLLFISKVIFRENNIKFYIQITFFKRILVL 257
+YLL + F+ FR + K + FF R+L L
Sbjct: 317 VYLLFIKFLESPDFRASKAKSLVDRRFFNRLLAL 350
>SPAC13A11.01c |rga8|SPAC2F7.18c|GTPase activating protein Rga8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 777
Score = 25.8 bits (54), Expect = 4.8
Identities = 11/43 (25%), Positives = 21/43 (48%)
Frame = +2
Query: 317 ENNFANEEQLKQIESVLPPRPAFVMPTGDDVEEVNLMEFTASE 445
E+N E + + +V P+ ++ DD+ ++ MEF E
Sbjct: 163 ESNETTSEAITDLTTVSSPQQQSLLENDDDLIQLGFMEFRPEE 205
>SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +2
Query: 401 DDVEEVNLMEFTASERGRGREEAYASDDEEHSHAGPG 511
++ EE + ME E G G EE DD + G G
Sbjct: 178 EEEEEADEMEEEFDEEGEGDEEEEEEDDGDGDGEGDG 214
>SPBC1734.12c |alg12||dolichyl pyrophosphate Man7GlcNAc2
alpha-1,3-glucosyltransferase Alg12 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 546
Score = 25.0 bits (52), Expect = 8.3
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 490 LLIITCIGFFSTSTTLT 440
+L++TCIG++S T T
Sbjct: 14 ILLVTCIGYYSYKTPFT 30
>SPBC29A10.15 |orc1|orp1, cdc30|origin recognition complex subunit
Orc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 707
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -3
Query: 381 AGRGGKTLSICLSCSSLAKLFSGKITSNFIYR 286
+G + L IC S LA+ +GK+T I++
Sbjct: 553 SGDARRALDICRRASELAENKNGKVTPGLIHQ 584
>SPBP8B7.15c |||ubiquitin-protein ligase E3 RBBP6 family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 482
Score = 25.0 bits (52), Expect = 8.3
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 7/50 (14%)
Frame = -3
Query: 255 GMPSP*IPFISPGLITSPDECLISKSLPSKCL-------TTNSKPHNASV 127
G P+P PF+ PGL P ++ ++ + TNS+P NASV
Sbjct: 420 GFPAPFPPFMMPGLPQMPP--MMMNAIAGQVYHNNRNPPRTNSRPSNASV 467
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,420,780
Number of Sequences: 5004
Number of extensions: 50536
Number of successful extensions: 180
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 174
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 258201856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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