Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_L12
(593 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34890| Best HMM Match : DnaJ (HMM E-Value=2.7e-37) 222 2e-58
SB_49296| Best HMM Match : No HMM Matches (HMM E-Value=.) 169 2e-42
SB_21966| Best HMM Match : DnaJ (HMM E-Value=5.30001e-40) 89 2e-18
SB_55431| Best HMM Match : DnaJ_C (HMM E-Value=7.2e-13) 87 1e-17
SB_39063| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 1e-13
SB_41006| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 4e-11
SB_293| Best HMM Match : DnaJ (HMM E-Value=7.6e-37) 51 8e-07
SB_19319| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_43852| Best HMM Match : DnaJ (HMM E-Value=1.7e-37) 44 7e-05
SB_7656| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 7e-04
SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.019
SB_215| Best HMM Match : ALG3 (HMM E-Value=0.18) 33 0.23
SB_27983| Best HMM Match : PAN (HMM E-Value=0.0022) 29 3.7
SB_42730| Best HMM Match : Ank (HMM E-Value=0.00016) 28 4.9
SB_49635| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_57108| Best HMM Match : WD40 (HMM E-Value=7.00649e-45) 27 8.6
SB_37154| Best HMM Match : WD40 (HMM E-Value=7.00649e-45) 27 8.6
SB_22639| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_6566| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_47271| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
>SB_34890| Best HMM Match : DnaJ (HMM E-Value=2.7e-37)
Length = 386
Score = 222 bits (542), Expect = 2e-58
Identities = 103/178 (57%), Positives = 134/178 (75%), Gaps = 2/178 (1%)
Frame = +2
Query: 2 RGEGDQQPDTQPGDVIIVLQQKPHDVFQRNGDDLVMKHEITLTEALCGFEFVVKHLDGRD 181
RGEGDQ+P+ +PGDVI+V+QQK HD+F R G DL M +TL EALCGF VVKHLDGRD
Sbjct: 210 RGEGDQEPNVEPGDVILVIQQKDHDLFSRQGMDLFMTKTVTLAEALCGFHMVVKHLDGRD 269
Query: 182 LLIRHSSGDVIKPGDMKGIQGEGMPQYKNPFEKGNLYIKFDVIFPENNFANEEQLKQIES 361
LLIR+ +G++I+PG ++GI GEGMP Y++PF+KGNLYIKFD+ FP N F EE+LKQ+E+
Sbjct: 270 LLIRYHAGNIIEPGCIRGIVGEGMPAYRHPFDKGNLYIKFDIEFPPNGFLPEEKLKQLET 329
Query: 362 VLPPRPAFVMPTGDDVEEVNLMEFTAS-ERGRGREEAYASD-DEEHSHAGPGVQCAHQ 529
LP RP D++EEV++ + + G+GR EAY +D DEE + GP +QCAHQ
Sbjct: 330 FLPKRPT-PPKVNDEMEEVDMEDLDPNYSPGQGRREAYDADSDEEETTGGPKMQCAHQ 386
>SB_49296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 966
Score = 169 bits (410), Expect = 2e-42
Identities = 78/168 (46%), Positives = 106/168 (63%)
Frame = +2
Query: 5 GEGDQQPDTQPGDVIIVLQQKPHDVFQRNGDDLVMKHEITLTEALCGFEFVVKHLDGRDL 184
GEGDQ P +PGD++IVL ++ H VF+R G DL+++ EI L E+LCGF+ + LD R L
Sbjct: 286 GEGDQDPGIEPGDIVIVLDEQEHPVFRRRGADLIIQMEIDLVESLCGFQKTITTLDKRTL 345
Query: 185 LIRHSSGDVIKPGDMKGIQGEGMPQYKNPFEKGNLYIKFDVIFPENNFANEEQLKQIESV 364
L+ G+VIKPGDMK I+ EGMP ++NPF KG L I+FDV FPEN N + + ++E +
Sbjct: 346 LVTSKPGNVIKPGDMKSIEDEGMPHHRNPFHKGRLLIQFDVKFPENGVLNPKNMDKLEKL 405
Query: 365 LPPRPAFVMPTGDDVEEVNLMEFTASERGRGREEAYASDDEEHSHAGP 508
LPPRP ++P D+ E+V L + E R R Y H P
Sbjct: 406 LPPRPEIIIP--DETEDVILEKIDPEENRRNRRAQYMGTAHLSRHKFP 451
>SB_21966| Best HMM Match : DnaJ (HMM E-Value=5.30001e-40)
Length = 351
Score = 89.4 bits (212), Expect = 2e-18
Identities = 48/114 (42%), Positives = 70/114 (61%), Gaps = 1/114 (0%)
Frame = +2
Query: 8 EGDQQPDTQPGDVIIVLQQKPHDVFQRNGDD-LVMKHEITLTEALCGFEFVVKHLDGRDL 184
EGD++P P DV+ ++ KPH F R+GD+ LV K +I+L +AL G V L GR +
Sbjct: 233 EGDRKPGVIPADVVFKIKDKPHKHFTRDGDNNLVYKAKISLRDALGGTTISVPTLSGRTV 292
Query: 185 LIRHSSGDVIKPGDMKGIQGEGMPQYKNPFEKGNLYIKFDVIFPENNFANEEQL 346
+ ++ DVI+PG K I GEG+P K+ KG+L IK+DV P N ++Q+
Sbjct: 293 QVHNA--DVIQPGSSKRIVGEGLPMPKDNSRKGDLIIKYDVYLPNNITPAQKQV 344
>SB_55431| Best HMM Match : DnaJ_C (HMM E-Value=7.2e-13)
Length = 278
Score = 87.0 bits (206), Expect = 1e-17
Identities = 44/106 (41%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
Frame = +2
Query: 8 EGDQQPDTQPGDVIIVLQQKPHDVFQRNGDD-LVMKHEITLTEALCGFEFVVKHLDGRDL 184
EGD +P D+I ++ KPH F+R+ ++ L+ ++TL +AL G V +DGR L
Sbjct: 161 EGDMKPGIIASDIIFIIADKPHQFFKRDSENNLIYVSKLTLKDALVGCVIQVPTIDGRVL 220
Query: 185 LIRHSSGDVIKPGDMKGIQGEGMPQYKNPFEKGNLYIKFDVIFPEN 322
I+ + +VI+PG K IQGEG+P KNP E+ +L + F+V FP N
Sbjct: 221 SIQVN--EVIRPGMQKRIQGEGLPLSKNPIERADLIVTFEVEFPTN 264
>SB_39063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 73.3 bits (172), Expect = 1e-13
Identities = 43/128 (33%), Positives = 74/128 (57%), Gaps = 6/128 (4%)
Frame = +2
Query: 8 EGDQQPDTQPGDVIIVLQQKPHDVFQRNGDDLVMKH-EITLTEALCGFE----FVVKHLD 172
EGDQ+P P D++ ++ K H+ F R+ D+ ++ +I+L +AL G+ V LD
Sbjct: 228 EGDQKPGRIPADIVFTIKDKKHEHFTRDNDNNILYTVKISLRDALTGYSSNITVPVPTLD 287
Query: 173 GRDLLIRHSSGDVIKPGDMKGIQGEGMPQYKNPFEKGNLYIKFDVIFPENNF-ANEEQLK 349
R ++ D++KPG K I+GEG+P K P ++ ++ + F+V+FP AN + L+
Sbjct: 288 HR--VVNVPLNDIVKPGSKKRIKGEGLPLPKIPGQRMDMLVTFEVVFPSRLAPANVDALR 345
Query: 350 QIESVLPP 373
++LPP
Sbjct: 346 ---NILPP 350
>SB_41006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 725
Score = 65.3 bits (152), Expect = 4e-11
Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 1/119 (0%)
Frame = +2
Query: 8 EGDQQPDTQPGDVIIVLQQKPHDVFQRNGD-DLVMKHEITLTEALCGFEFVVKHLDGRDL 184
EGD++P P D++ ++ KPH F R+ D +L+ K ++L AL G V L G
Sbjct: 225 EGDRRPGKDPSDIVFKIKDKPHRHFTRDKDNNLIYKATVSLRTALGGMNIHVPSLCGE-- 282
Query: 185 LIRHSSGDVIKPGDMKGIQGEGMPQYKNPFEKGNLYIKFDVIFPENNFANEEQLKQIES 361
+I + +I+PG ++ I+GEG+P NP + ++ ++FD E + ++ Q S
Sbjct: 283 VIDLENKGIIQPGMVRTIKGEGLPIPGNPSVRADMIVEFDPKTGEKQPRKQRRVMQTAS 341
>SB_293| Best HMM Match : DnaJ (HMM E-Value=7.6e-37)
Length = 238
Score = 50.8 bits (116), Expect = 8e-07
Identities = 31/84 (36%), Positives = 45/84 (53%)
Frame = +2
Query: 92 GDDLVMKHEITLTEALCGFEFVVKHLDGRDLLIRHSSGDVIKPGDMKGIQGEGMPQYKNP 271
G DL + E+TL E G F+ H+ +R + PG +GEGMP Y+N
Sbjct: 132 GSDLTVDLEVTLEELYNG-NFIEVHV------VREK---ITWPGARIKKKGEGMPSYENN 181
Query: 272 FEKGNLYIKFDVIFPENNFANEEQ 343
++G+LYI FDV FP + N+E+
Sbjct: 182 HDRGDLYITFDVEFPRGSLDNQEK 205
>SB_19319| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/55 (41%), Positives = 30/55 (54%)
Frame = +2
Query: 8 EGDQQPDTQPGDVIIVLQQKPHDVFQRNGDDLVMKHEITLTEALCGFEFVVKHLD 172
EG+ D +PGD+ + + H F R G DL ITL +AL GFE + HLD
Sbjct: 48 EGEPHIDGEPGDLKFKIIELRHKRFTRKGKDLYANVTITLNDALSGFEMDIPHLD 102
>SB_43852| Best HMM Match : DnaJ (HMM E-Value=1.7e-37)
Length = 399
Score = 44.4 bits (100), Expect = 7e-05
Identities = 16/44 (36%), Positives = 29/44 (65%)
Frame = +2
Query: 8 EGDQQPDTQPGDVIIVLQQKPHDVFQRNGDDLVMKHEITLTEAL 139
EGDQ P+ P D++ +++ KPH +F+R+ D+L+ + L + L
Sbjct: 209 EGDQGPNNIPADIVFIVKDKPHPIFKRDNDNLIYIATVPLGKVL 252
>SB_7656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 26
Score = 41.1 bits (92), Expect = 7e-04
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +2
Query: 227 MKGIQGEGMPQYKNPFEKGNLYIKFD 304
MK I+ EGMP ++NPF KG L I+FD
Sbjct: 1 MKSIEDEGMPHHRNPFHKGRLLIQFD 26
>SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1084
Score = 36.3 bits (80), Expect = 0.019
Identities = 24/102 (23%), Positives = 51/102 (50%)
Frame = +2
Query: 38 GDVIIVLQQKPHDVFQRNGDDLVMKHEITLTEALCGFEFVVKHLDGRDLLIRHSSGDVIK 217
G+V + + +F+R+G ++ I+ T+A+ G + + + G D+ ++ G +
Sbjct: 291 GEVYVTFRVSESKIFERDGINIYSSASISFTQAILGGKIRIPGIQG-DMDLKIPPG--TQ 347
Query: 218 PGDMKGIQGEGMPQYKNPFEKGNLYIKFDVIFPENNFANEEQ 343
+ G G+P+ + KG+ Y+ F V P+ + NE+Q
Sbjct: 348 SHQQMRLTGRGVPRI-DGLGKGDHYVSFKVHIPK--YLNEKQ 386
>SB_215| Best HMM Match : ALG3 (HMM E-Value=0.18)
Length = 521
Score = 32.7 bits (71), Expect = 0.23
Identities = 17/52 (32%), Positives = 31/52 (59%)
Frame = -2
Query: 361 TLYLLKLLFISKVIFRENNIKFYIQITFFKRILVLRHAFTLNTFHISRLNYI 206
+LY+L+++F+S IFR+ + YI F + VLR F + +I R+ ++
Sbjct: 14 SLYILRVMFVSLYIFRDLFVSLYIFRDVFVSLYVLRVMFV--SLYILRVMFV 63
Score = 32.7 bits (71), Expect = 0.23
Identities = 15/52 (28%), Positives = 31/52 (59%)
Frame = -2
Query: 361 TLYLLKLLFISKVIFRENNIKFYIQITFFKRILVLRHAFTLNTFHISRLNYI 206
+LY+L+++F+S IFR+ + Y+ F + +LR F + +I R+ ++
Sbjct: 54 SLYILRVMFVSLYIFRDVFVSLYVLRDMFVSLYILRVMFV--SLYILRVMFV 103
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = -2
Query: 361 TLYLLKLLFISKVIFRENNIKFYIQITFFKRILVLRHAFTLNTFHISRLNYI 206
+LY+L+++F+S I R + YI F + VLR F + +I R+ ++
Sbjct: 44 SLYVLRVMFVSLYILRVMFVSLYIFRDVFVSLYVLRDMFV--SLYILRVMFV 93
>SB_27983| Best HMM Match : PAN (HMM E-Value=0.0022)
Length = 616
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3
Query: 210 TSPDECLISKSLPSKCLTTNSKPHN 136
TSP EC L S+CL+ N KPH+
Sbjct: 185 TSPVECEQLCFLDSRCLSINFKPHS 209
>SB_42730| Best HMM Match : Ank (HMM E-Value=0.00016)
Length = 999
Score = 28.3 bits (60), Expect = 4.9
Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 6/104 (5%)
Frame = +2
Query: 206 DVIKPGDMKGIQGEGMPQYKNPFEKGNLYIKFDVIFPENNFANEEQLKQIESVLPPRPAF 385
+V+ + +G++ G Y+ E + + PE+N NEE++K+ E +P
Sbjct: 215 EVVTASEAEGLEENGQDTYEEE-EDEEAEEELSGV-PESNLLNEEEMKE-EETHDEKP-- 269
Query: 386 VMPTGDDVEEVNLMEF--TASERGRGR----EEAYASDDEEHSH 499
+V EVN +F A R RG EE + EH H
Sbjct: 270 --EENPEVPEVNEEDFIRAADARRRGEDGDTEELDGEEKYEHLH 311
>SB_49635| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 276
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = -2
Query: 460 STSTTLTCSKLHQIDFLHIITSWHHKRRARW*NTLY 353
+T+TT T SK Q +FLH T H+RR R T Y
Sbjct: 217 TTTTTTTDSKGDQ-EFLHKCTQAKHRRRRRSAETEY 251
>SB_57108| Best HMM Match : WD40 (HMM E-Value=7.00649e-45)
Length = 243
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -3
Query: 363 TLSICLSCSSLAKLFSGKITSNFIYRLPFSKGF 265
TL+ L L K +S ++ + ++YRLP+ GF
Sbjct: 155 TLNYSLYKKQLTKAYSMELVNVWLYRLPYLPGF 187
>SB_37154| Best HMM Match : WD40 (HMM E-Value=7.00649e-45)
Length = 870
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -3
Query: 363 TLSICLSCSSLAKLFSGKITSNFIYRLPFSKGF 265
TL+ L L K +S ++ + ++YRLP+ GF
Sbjct: 782 TLNYSLYKKQLTKAYSMELVNVWLYRLPYLPGF 814
>SB_22639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 27.5 bits (58), Expect = 8.6
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Frame = +2
Query: 14 DQQPDTQPGDVIIVLQQKPHDVFQ-RNGDDLVMKHEITLTEALCGFEFVVKHLDGRDLLI 190
D P+T P DVI + + DV + + D + K++ T + G ++GR I
Sbjct: 473 DGDPNTDPDDVIEITVEPKDDVMEIKTTDKIGDKYQAIFTPKVPGKYKTEVKINGRH--I 530
Query: 191 RHSSGDV-IKPGDMKGIQGEGMPQYKNPFEK 280
+S ++ IKP M+ + ++P EK
Sbjct: 531 SNSPMEICIKPQRMRYTREMKTKGSRDPLEK 561
>SB_6566| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +2
Query: 8 EGDQQPDTQPGDVIIVLQQKPHDVFQRNGDDLVMKHEITLTEALCG 145
+ D D DV++V V +GDD+V H + +T+ + G
Sbjct: 80 DDDDDDDDDDDDVVVVNDVVVDYVIVVDGDDIVDDHPVVITKFVTG 125
>SB_47271| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 811
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 305 VIFPENNFANEEQLKQIESVLPPRPAFVMPTGDDVEEVNL-MEFTASERGRGREE 466
+IF + +++ + P PA GDD E+VNL + +SE G+ R++
Sbjct: 273 IIFTLLGATHPDKIDSGDDAPPQSPAIKGAPGDDFEDVNLDDDQESSENGKERKD 327
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,163,407
Number of Sequences: 59808
Number of extensions: 385462
Number of successful extensions: 997
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 987
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1427401750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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