Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_L09
(390 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 234 3e-63
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 234 4e-63
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 234 4e-63
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 126 9e-31
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 126 2e-30
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 79 3e-16
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 55 4e-09
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 44 8e-06
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 43 1e-05
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 43 1e-05
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 42 4e-05
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 34 7e-04
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 33 0.021
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 31 0.048
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 29 0.19
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 29 0.25
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 28 0.59
SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p... 27 1.0
SPBC2F12.14c |gua1||IMP dehydrogenase Gua1 |Schizosaccharomyces ... 27 1.4
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 26 1.8
SPAC3A12.07 |rpb11||DNA-directed RNA polymerase II complex subun... 26 2.4
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 26 2.4
SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces po... 25 4.1
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 25 4.1
SPAC17G8.04c |arc15|arc5, arc5|ARP2/3 actin-organizing complex s... 25 5.5
SPAC2G11.11c |prh1||ATP-dependent RNA helicase Prh1|Schizosaccha... 24 7.2
SPAC20H4.09 |||ATP-dependent RNA helicase, spliceosomal |Schizos... 24 7.2
SPCC1223.04c |mug76||lysine methyltransferase |Schizosaccharomyc... 24 7.2
SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase Prp16|... 24 9.5
SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomy... 24 9.5
SPBC12C2.11 ||SPBC21D10.02|glutamine-fructose-6-phosphate transa... 24 9.5
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 234 bits (573), Expect = 3e-63
Identities = 108/116 (93%), Positives = 112/116 (96%)
Frame = +1
Query: 43 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 223 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 390
DKLKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCAVLI+
Sbjct: 61 DKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLII 116
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 234 bits (572), Expect = 4e-63
Identities = 107/116 (92%), Positives = 112/116 (96%)
Frame = +1
Query: 43 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 223 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 390
DKLKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+
Sbjct: 61 DKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILII 116
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 234 bits (572), Expect = 4e-63
Identities = 107/116 (92%), Positives = 112/116 (96%)
Frame = +1
Query: 43 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 223 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 390
DKLKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+
Sbjct: 61 DKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILII 116
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 126 bits (305), Expect = 9e-31
Identities = 58/109 (53%), Positives = 76/109 (69%)
Frame = +1
Query: 64 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 243
+++VV GHVDSGKST G ++++ G I+ R+++K EA GKGSF YAW+LD + ER
Sbjct: 178 VHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTEEER 237
Query: 244 ERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 390
RG+T+D+A FE+ K I DAPGHRDFI MI G S AD AVL+V
Sbjct: 238 ARGVTMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVV 286
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 126 bits (303), Expect = 2e-30
Identities = 55/112 (49%), Positives = 79/112 (70%)
Frame = +1
Query: 55 KVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 234
K H+NIV IGHVD+GKST G++++ G +DKRT+EK E+EA+E GK S+ +W LD
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTS 295
Query: 235 AERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 390
ERE+G T+++ FET +++DAPGH+ ++ NMI G SQAD VL++
Sbjct: 296 EEREKGKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVI 347
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 78.6 bits (185), Expect = 3e-16
Identities = 45/114 (39%), Positives = 63/114 (55%)
Frame = +1
Query: 49 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 228
++K H+NI IGHVD GK+T T I KC ++G+ SF +DK
Sbjct: 49 RKKPHVNIGTIGHVDHGKTTLTA-AITKC--------------LSDLGQASFMDYSQIDK 93
Query: 229 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 390
E+ RGITI A ++ET + +D PGH D+IKNMITG + D A+++V
Sbjct: 94 APEEKARGITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVV 147
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 54.8 bits (126), Expect = 4e-09
Identities = 36/108 (33%), Positives = 52/108 (48%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 246
N+ +I H+D+GK+T T ++Y G F + G V+D L AER+
Sbjct: 30 NVGIIAHIDAGKTTLTEKMLYYGG---------FTSHFGNVDTGDT----VMDYLPAERQ 76
Query: 247 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 390
RGITI+ A F + +ID PGH DF + + D AV I+
Sbjct: 77 RGITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAII 124
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 44.0 bits (99), Expect = 8e-06
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 4/112 (3%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 246
N VI H+D GKST + ++ G I++ + F LDKL+ ER
Sbjct: 60 NWAVIAHIDHGKSTLSDCILKLTGVINEHNF-----------RNQF-----LDKLEVERR 103
Query: 247 RGITIDIA----LWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 390
RGIT+ ++ + Y + +ID PGH DF ++ + + +L+V
Sbjct: 104 RGITVKAQTCSMIYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLV 155
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 43.2 bits (97), Expect = 1e-05
Identities = 39/119 (32%), Positives = 54/119 (45%), Gaps = 3/119 (2%)
Frame = +1
Query: 43 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGID--KRTIEKF-EKEAQEMGKGSFKYA 213
MGK N+ VI HVD GKST T L+ K G I K +F + A E +G +
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKS 72
Query: 214 WVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 390
+ L AE D+ T + V +ID+PGH DF + D A+++V
Sbjct: 73 TAIS-LFAEMTDDDMKDMKEPADGTD-FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 43.2 bits (97), Expect = 1e-05
Identities = 39/119 (32%), Positives = 54/119 (45%), Gaps = 3/119 (2%)
Frame = +1
Query: 43 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGID--KRTIEKF-EKEAQEMGKGSFKYA 213
MGK N+ VI HVD GKST T L+ K G I K +F + A E +G +
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKS 72
Query: 214 WVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 390
+ L AE D+ T + V +ID+PGH DF + D A+++V
Sbjct: 73 TAIS-LFAEMTDDDMKDMKEPADGTD-FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 41.5 bits (93), Expect = 4e-05
Identities = 40/127 (31%), Positives = 57/127 (44%), Gaps = 19/127 (14%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 246
NI + H+DSGK+T T ++Y G I K+ E+ +G +D ++ ERE
Sbjct: 61 NIGISAHIDSGKTTFTERVLYYTGRI---------KDIHEV-RGKDNVGAKMDFMELERE 110
Query: 247 RGITIDIA----LWK---------------FETGKYYVTIIDAPGHRDFIKNMITGTSQA 369
+GITI A W+ FE Y + IID PGH DF +
Sbjct: 111 KGITIQSAATHCTWERTVDQIEANEKQKTDFEK-SYNINIIDTPGHIDFTIEVERALRVL 169
Query: 370 DCAVLIV 390
D AVL++
Sbjct: 170 DGAVLVL 176
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 34.3 bits (75), Expect(2) = 7e-04
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +1
Query: 190 GKGSFKYAWVLDKLKAERERGITIDIALWK--FETGKYYVTIIDAPGHRDFIKNMITGTS 363
GK + A+ + + GIT I + F+ G ++T +D PGH F G +
Sbjct: 183 GKTTLLDAFRKSTIASTEHGGITQKIGAFTVPFDKGSKFITFLDTPGHMAFEAMRKRGAN 242
Query: 364 QADCAVLIV 390
AD VL+V
Sbjct: 243 IADIVVLVV 251
Score = 22.2 bits (45), Expect(2) = 7e-04
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +1
Query: 70 IVVIGHVDSGKST 108
+ ++GHVD GK+T
Sbjct: 174 VTLMGHVDHGKTT 186
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 32.7 bits (71), Expect = 0.021
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Frame = +1
Query: 76 VIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA--QEMGKGSFKYAWVLDKLKAERER 249
++GHVD+GK+ +L + +++ E Q++G F + K K ++
Sbjct: 489 ILGHVDTGKTKLLDNL-------RRSNVQEGEAGGITQQIGATYFPIESIKQKTKVVNKK 541
Query: 250 GITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 390
G K + + IID PGH F GTS + A+L++
Sbjct: 542 G--------KLQYNIPGLLIIDTPGHESFTNLRSRGTSLCNIAILVI 580
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 31.5 bits (68), Expect = 0.048
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 7/115 (6%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGIDKR---TIEKFEKEAQEMGKG----SFKYAWVLD 225
N ++ HVD GK+T L+ G I + T+ + E+ +G S +
Sbjct: 21 NFTLLAHVDHGKTTLADSLLASNGIISSKLAGTVRFLDFREDEITRGITMKSSAISLFFK 80
Query: 226 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 390
+ E+ + D Y + +ID+PGH DF + + + D A ++V
Sbjct: 81 VISQNDEKRVEKD----------YLINLIDSPGHVDFSSEVSSASRLCDGAFVLV 125
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 29.5 bits (63), Expect = 0.19
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +1
Query: 298 YVTIIDAPGHRDFIKNMITGTSQADCAVLIV 390
+V+ +D PGH + M+ G + D A+L++
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLI 139
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 29.1 bits (62), Expect = 0.25
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +1
Query: 223 DKLKAER-ERGITIDIALWKFETGKYYV--TIIDAPGHRDFIKN 345
+K++A+ E+ + I+I + E +++ T+ID PG DFI N
Sbjct: 60 EKVRAKHAEKTVEIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 27.9 bits (59), Expect = 0.59
Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 5/113 (4%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 246
+ +V GH+ GKS L+Y + + + S +Y D ERE
Sbjct: 142 SFIVAGHLHHGKSALLDLLVYYT-----------HPDTKPPKRRSLRYT---DTHYLERE 187
Query: 247 RGITID-----IALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 390
R ++I +A+ + + ID PGH DF+ + + +D VL+V
Sbjct: 188 RVMSIKSTPLTLAVSDMKGKTFAFQCIDTPGHVDFVDEVAAPMAISDGVVLVV 240
>SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 27.1 bits (57), Expect = 1.0
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -2
Query: 254 IPRSRSAFSLSNTQAYLKEPLPISWASFSNFSMVRLSIPPH 132
IP+ A S+ N++ + ++ LP + S V+L +P H
Sbjct: 173 IPKKNPARSVCNSKLFNEDTLPAEFEEVSISPPVKLELPTH 213
>SPBC2F12.14c |gua1||IMP dehydrogenase Gua1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 524
Score = 26.6 bits (56), Expect = 1.4
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +1
Query: 199 SFK-YAWVLDKLKA-ERERGITID-IALWKFETGKYYVTIIDAPGHRDFIKNMIT 354
+FK Y L+ LK E++ G++ID + F+ G + + PG+ DF+ N ++
Sbjct: 3 AFKPYTEALEVLKKYEKKDGLSIDDLIRHNFQGGLTFNDFLILPGYIDFVPNNVS 57
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 26.2 bits (55), Expect = 1.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 134 AVVSTNVPSKSSRRKPRKWVRVPS 205
A++S + K + +P KWV VPS
Sbjct: 224 ALISNGLKVKETSEEPEKWVVVPS 247
>SPAC3A12.07 |rpb11||DNA-directed RNA polymerase II complex subunit
Rpb11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 123
Score = 25.8 bits (54), Expect = 2.4
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = -1
Query: 381 HGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELP 274
+ AV DH L + ++ + D ++FAG+++P
Sbjct: 28 NAAVVTLEKEDHTLANMLANQLLSDERVLFAGYKVP 63
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 25.8 bits (54), Expect = 2.4
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -2
Query: 284 SNFQRAISMVIPRSRSAFSLSNTQAYLKEPLPISWASFSNFSMV 153
S F IS+ +P FSL+ ++ K LPI W S + S V
Sbjct: 403 STFGVNISVGVPTGSITFSLNWSRLGQKISLPIMWCSVFDRSAV 446
>SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 334
Score = 25.0 bits (52), Expect = 4.1
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = -1
Query: 384 KHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPE 271
K G V + + V+DE ++ ++D+G + AG ++ E
Sbjct: 236 KRGIVIVNTARGAVMDEAALVEALDEGIVYSAGLDVFE 273
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 25.0 bits (52), Expect = 4.1
Identities = 8/20 (40%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +3
Query: 255 HHRY-CSLEVRNRQILCHHH 311
HH++ C L V+N+++ H H
Sbjct: 196 HHKFFCDLCVKNKKVFTHEH 215
>SPAC17G8.04c |arc15|arc5, arc5|ARP2/3 actin-organizing complex
subunit Arc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 152
Score = 24.6 bits (51), Expect = 5.5
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -2
Query: 275 QRAISMVIPRSRSAFSLSNTQAYLKEPLPISWASFSN 165
Q A+S +IP++RSA N LK L S+ + N
Sbjct: 33 QAAVSQLIPQARSAIQTGNALQGLKTLL--SYVPYGN 67
>SPAC2G11.11c |prh1||ATP-dependent RNA helicase
Prh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 719
Score = 24.2 bits (50), Expect = 7.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 70 IVVIGHVDSGKSTTTGHLIYKC 135
IVV+G SGKST + +C
Sbjct: 115 IVVVGETGSGKSTQIPQFLNEC 136
>SPAC20H4.09 |||ATP-dependent RNA helicase, spliceosomal
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 647
Score = 24.2 bits (50), Expect = 7.2
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 73 VVIGHVDSGKSTTTGHLIYKCG 138
+V+GH GK+T +Y+ G
Sbjct: 45 IVLGHTGCGKTTQIPQFLYEAG 66
>SPCC1223.04c |mug76||lysine methyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 381
Score = 24.2 bits (50), Expect = 7.2
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3
Query: 321 WTQRFHQEHDHWN 359
W Q F Q+H +WN
Sbjct: 258 WQQSFLQDHGYWN 270
>SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase
Prp16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 23.8 bits (49), Expect = 9.5
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +1
Query: 70 IVVIGHVDSGKSTTTGHLIYKCG 138
++V+G SGK+T +Y+ G
Sbjct: 511 LIVVGETGSGKTTQLAQFLYEDG 533
>SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 384
Score = 23.8 bits (49), Expect = 9.5
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = -2
Query: 317 ASMMVT*YLPVSNFQRAISMVIPRSRSAFSLSNTQAYLKEPLPISWASFSNFSMVRLSIP 138
AS + Y ++ R ++ + P +R + S YL+ PL S S S + +R SIP
Sbjct: 309 ASTALNSYSTPNSVSRKLTNLTPAARRLVARS----YLRSPLHGSSPSASRHTALRTSIP 364
>SPBC12C2.11 ||SPBC21D10.02|glutamine-fructose-6-phosphate
transaminase |Schizosaccharomyces pombe|chr 2|||Manual
Length = 696
Score = 23.8 bits (49), Expect = 9.5
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +1
Query: 79 IGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKY 210
I HV G+ L + GG RTIE E E + KG++ +
Sbjct: 297 IAHVRDGE-LHVHRLRREGGGSTTRTIETLEMEIASVMKGNYDH 339
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,616,294
Number of Sequences: 5004
Number of extensions: 32081
Number of successful extensions: 140
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 137
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 128029482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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