Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_L09
(390 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51711| Best HMM Match : GTP_EFTU_D3 (HMM E-Value=0) 128 2e-30
SB_18076| Best HMM Match : GTP_EFTU (HMM E-Value=0.018) 99 1e-21
SB_8918| Best HMM Match : GTP_EFTU (HMM E-Value=1.09301e-43) 93 1e-19
SB_50386| Best HMM Match : GTP_EFTU (HMM E-Value=1.6e-09) 60 5e-10
SB_7329| Best HMM Match : GTP_EFTU (HMM E-Value=0) 50 7e-07
SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.009
SB_44740| Best HMM Match : GTP_EFTU (HMM E-Value=0) 35 0.021
SB_22769| Best HMM Match : GTP_EFTU (HMM E-Value=3.9e-07) 34 0.036
SB_1541| Best HMM Match : MMR_HSR1 (HMM E-Value=0.12) 33 0.083
SB_3698| Best HMM Match : GTP_EFTU (HMM E-Value=9.3e-34) 31 0.25
SB_56013| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.77
SB_18949| Best HMM Match : GTP_EFTU (HMM E-Value=1.7e-10) 30 0.77
SB_43410| Best HMM Match : GTP_EFTU (HMM E-Value=3.9e-26) 29 1.4
SB_50050| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_52347| Best HMM Match : TPR_1 (HMM E-Value=0) 29 1.8
SB_6742| Best HMM Match : EGF_CA (HMM E-Value=5.40004e-41) 28 2.4
SB_22789| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.1
SB_4624| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.1
SB_8252| Best HMM Match : rve (HMM E-Value=0.13) 27 5.4
SB_9892| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0013) 27 7.2
SB_41020| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.5
SB_20174| Best HMM Match : DedA (HMM E-Value=3.7) 26 9.5
SB_46125| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.5
SB_18117| Best HMM Match : rve (HMM E-Value=1.7e-29) 26 9.5
SB_10748| Best HMM Match : GETHR (HMM E-Value=1.5) 26 9.5
>SB_51711| Best HMM Match : GTP_EFTU_D3 (HMM E-Value=0)
Length = 322
Score = 128 bits (308), Expect = 2e-30
Identities = 58/60 (96%), Positives = 59/60 (98%)
Frame = +1
Query: 187 MGKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQ 366
MGKGSFKYAWVLDKLKAERERGITIDIALWKFET KYYVT+IDAPGHRDFIKNMITGTSQ
Sbjct: 1 MGKGSFKYAWVLDKLKAERERGITIDIALWKFETLKYYVTVIDAPGHRDFIKNMITGTSQ 60
>SB_18076| Best HMM Match : GTP_EFTU (HMM E-Value=0.018)
Length = 106
Score = 98.7 bits (235), Expect = 1e-21
Identities = 44/49 (89%), Positives = 47/49 (95%)
Frame = +1
Query: 43 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEM 189
M KEK+HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKE+ E+
Sbjct: 1 MPKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKESSEV 49
>SB_8918| Best HMM Match : GTP_EFTU (HMM E-Value=1.09301e-43)
Length = 547
Score = 92.7 bits (220), Expect = 1e-19
Identities = 37/88 (42%), Positives = 62/88 (70%)
Frame = +1
Query: 127 YKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVT 306
Y G +DKRT+EK+E+EA+E + ++ +W LD + ER++G T+++ F+T + T
Sbjct: 166 YLTGQVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGNTVEVGRAAFDTDTKHFT 225
Query: 307 IIDAPGHRDFIKNMITGTSQADCAVLIV 390
++DAPGH+ F+ NMI+G +QAD VL++
Sbjct: 226 LLDAPGHKSFVPNMISGATQADLGVLVI 253
>SB_50386| Best HMM Match : GTP_EFTU (HMM E-Value=1.6e-09)
Length = 123
Score = 60.5 bits (140), Expect = 5e-10
Identities = 24/44 (54%), Positives = 35/44 (79%)
Frame = +1
Query: 259 IDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 390
+D+ L +F+T +T++DAPGH+DFI NMITG +QAD A+L+V
Sbjct: 1 MDVGLTRFQTKNKVITLMDAPGHKDFIPNMITGAAQADVAILVV 44
>SB_7329| Best HMM Match : GTP_EFTU (HMM E-Value=0)
Length = 359
Score = 50.0 bits (114), Expect = 7e-07
Identities = 28/105 (26%), Positives = 51/105 (48%)
Frame = +1
Query: 76 VIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGI 255
+I H D+GK+T T L+ G I +EA + K D ++ ER+RGI
Sbjct: 15 IISHPDAGKTTLTEKLLLFGGAI---------QEAGAVKSNKIKKGATSDFMEIERQRGI 65
Query: 256 TIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 390
++ ++ F + I+D PGH+DF ++ + D ++++
Sbjct: 66 SVATSVLAFNYRDKKINILDTPGHKDFAEDTFRTLTAVDSVIVVI 110
>SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2670
Score = 36.3 bits (80), Expect = 0.009
Identities = 25/65 (38%), Positives = 31/65 (47%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 246
N ++ HVD GKST L+ G I K + K VLDKL+ ERE
Sbjct: 1943 NFSIVAHVDHGKSTLADRLLEVTGTISKSSDNK----------------QVLDKLQVERE 1986
Query: 247 RGITI 261
RGIT+
Sbjct: 1987 RGITV 1991
>SB_44740| Best HMM Match : GTP_EFTU (HMM E-Value=0)
Length = 833
Score = 35.1 bits (77), Expect = 0.021
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 4/117 (3%)
Frame = +1
Query: 52 EKVHI-NIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKFEKEAQEMGKGSFKYAWVL 222
+K++I N+ VI HVD GKST T L+ K G I K +F ++
Sbjct: 14 KKLNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAAAKAGETRFTDTRKDEQDRCITIKSTA 73
Query: 223 DKLKAERERGITIDIALWKFETGK-YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 390
L E I K + + + +ID+PGH DF + D A+++V
Sbjct: 74 ISLYYELPESDFEYITQPKDPKERGFLINLIDSPGHVDFSSEVTAALRVTDGALVVV 130
>SB_22769| Best HMM Match : GTP_EFTU (HMM E-Value=3.9e-07)
Length = 203
Score = 34.3 bits (75), Expect = 0.036
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Frame = +1
Query: 49 KEKV-HINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 219
KE++ + NI V+GHVDSGK++ L DK + ++G SF+ A +
Sbjct: 30 KERILNFNIGVLGHVDSGKTSLAKALSTTASTASFDKNPQSQERGITLDLGFSSFQVA-L 88
Query: 220 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITG 357
+ L R G D+ +T++D PGH IK +I G
Sbjct: 89 PEHL---RSAGSEHDLL---------QMTLVDCPGHASLIKTIIGG 122
>SB_1541| Best HMM Match : MMR_HSR1 (HMM E-Value=0.12)
Length = 347
Score = 33.1 bits (72), Expect = 0.083
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 9/109 (8%)
Frame = +1
Query: 58 VHINIVVIGHVDSGKST-----TTGHLIYKCGGIDKRTI-EKFEKEA---QEMGKGSFKY 210
+ + + V+G+VD+GKST T G L G +R K E E+ +G +
Sbjct: 228 MEVRVAVVGNVDAGKSTLLGVLTHGELDNGRGTARQRLFRHKHEMESGRTSSVGNDILGF 287
Query: 211 AWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITG 357
+ + G +D A E+ K +T ID GH ++K I G
Sbjct: 288 DNTGQVVNKAEQHGANVDWAKICKESSK-VITFIDLAGHERYLKTTIFG 335
>SB_3698| Best HMM Match : GTP_EFTU (HMM E-Value=9.3e-34)
Length = 240
Score = 31.5 bits (68), Expect = 0.25
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = +1
Query: 250 GITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 390
GIT I + + G + +D PGH F G D +++V
Sbjct: 123 GITQHIGAYSVKVGDQKIAFLDTPGHEAFTAMRARGAQVTDLVIIVV 169
>SB_56013| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 29.9 bits (64), Expect = 0.77
Identities = 33/130 (25%), Positives = 53/130 (40%), Gaps = 6/130 (4%)
Frame = +1
Query: 19 IVIRD*PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYK--CGGIDKRTIEKFE--KEAQE 186
+++R P ++ I + V+G+V+SGKST G L Y G + + F E Q
Sbjct: 99 VLVRQVPD-DQQFTDIRMAVLGNVESGKSTLLGVLTYDELDNGQGRARLNLFRHLHEIQS 157
Query: 187 MGKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTS- 363
S + + E A E +T ID GH ++K I G +
Sbjct: 158 GRTSSISHEILGFSCTGEVVNYSDGRSAEDVCEQSSKLITFIDLAGHHKYMKTTIFGLTG 217
Query: 364 -QADCAVLIV 390
D A+L++
Sbjct: 218 HSPDYAMLVI 227
>SB_18949| Best HMM Match : GTP_EFTU (HMM E-Value=1.7e-10)
Length = 783
Score = 29.9 bits (64), Expect = 0.77
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 307 IIDAPGHRDFIKNMITGTSQADCAVLIV 390
IID PGH F G+S D A+L+V
Sbjct: 682 IIDTPGHESFSNLRSRGSSLCDMAILVV 709
>SB_43410| Best HMM Match : GTP_EFTU (HMM E-Value=3.9e-26)
Length = 541
Score = 29.1 bits (62), Expect = 1.4
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +1
Query: 226 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 390
+ K E ER ITI + Y +D PGH + M+ G + D A+L++
Sbjct: 49 RFKNELERNITIKLG--------YANAKVDCPGHDILMATMLNGAAVMDAALLLI 95
>SB_50050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 545
Score = 28.7 bits (61), Expect = 1.8
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +1
Query: 250 GITIDIA--LWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 390
GIT I L K +G+ +T ID PGH F G + D VL+V
Sbjct: 60 GITQHIGAFLVKLPSGEK-ITFIDTPGHAAFNSMRARGANVTDIVVLVV 107
>SB_52347| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 687
Score = 28.7 bits (61), Expect = 1.8
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -2
Query: 386 ISTAQSA*DVPVIMFLMKSLCPGASMMVT*YLPVSNFQRAISMVI 252
I QSA DV ++ L L G + ++ +LP SNF + V+
Sbjct: 331 IPLIQSAKDVRILAVLAMLLTIGLAFLIVPFLPASNFFFRVGFVV 375
>SB_6742| Best HMM Match : EGF_CA (HMM E-Value=5.40004e-41)
Length = 653
Score = 28.3 bits (60), Expect = 2.4
Identities = 22/66 (33%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = +3
Query: 156 HRKVREGSPGNG*GFLQIRLGIGQTKGRA*AWYHHRYCSLEVRNRQILCH--HHRRSWTQ 329
H V P G L Q K + +HHRYC + V H HHRR +
Sbjct: 58 HVMVNVSQPSGGKLCFSFELSGFQGKNVSSFDHHHRYCIIIVTVSWSFDHHNHHRR---R 114
Query: 330 RFHQEH 347
R HQ H
Sbjct: 115 RRHQHH 120
>SB_22789| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 27.5 bits (58), Expect = 4.1
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +1
Query: 76 VIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKG-SFKY-AWVLDKLKAERER 249
++G VD GK+ G + Y+ G + T+E + KG ++K+ +D K E+
Sbjct: 623 IVGTVDIGKTVDIGKVSYEKGWTYEFTVETVDIGKVSDAKGRTYKFIVETVDIGKVSYEK 682
Query: 250 GITIDIALWKFETGK 294
G T + + GK
Sbjct: 683 GRTYKFIVETVDIGK 697
>SB_4624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 173
Score = 27.5 bits (58), Expect = 4.1
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -3
Query: 259 W*YHAHARPLVCPIPKRI*RNPYPF 185
W +H H+RP+ PIP + + P +
Sbjct: 130 WQFHQHSRPMAVPIPYYLYQAPIQY 154
>SB_8252| Best HMM Match : rve (HMM E-Value=0.13)
Length = 264
Score = 27.1 bits (57), Expect = 5.4
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +3
Query: 303 HHHRRSWTQRFHQEHDH 353
HHHRR +R H H H
Sbjct: 238 HHHRRRRRRRHHHHHHH 254
>SB_9892| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0013)
Length = 663
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 160 EKFEKEAQEMGKGSFKYAWVLDKLKAERE 246
+++ K +EM + K W +KLKAE E
Sbjct: 42 KEYSKLKEEMNSDAVKVKWAQNKLKAELE 70
>SB_41020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1229
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = -1
Query: 252 TTLTLGL*FVQYPSVFEGTLTHFLGFLLELFDGTFVDTTAFVDQVTS 112
TT+T YPS+ + +F +FD T + T V +T+
Sbjct: 236 TTITPSPNITSYPSLMTSAVGNFTSATSVVFDSTTPNATTLVPSITA 282
>SB_20174| Best HMM Match : DedA (HMM E-Value=3.7)
Length = 228
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 61 HINIVVIGHVDSGKSTTTGHLI 126
H+ VIGH+ ST GHLI
Sbjct: 169 HLTSTVIGHLQHLTSTVIGHLI 190
>SB_46125| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1564
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 121 LIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERER 249
L + CGG+++ +E QE+ F+Y +L+ RER
Sbjct: 740 LFFGCGGLNEMLSFLAVQEVQELVISVFRYLVMLEDRAQSRER 782
>SB_18117| Best HMM Match : rve (HMM E-Value=1.7e-29)
Length = 1544
Score = 26.2 bits (55), Expect = 9.5
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -1
Query: 354 SDHVLDEISVSRSVDDGDIVFAGFELPESNIDGD 253
SD D VS +DGD V G ++ + +IDGD
Sbjct: 84 SDGSSDGDDVSDGSNDGDDVSDGDDVSDGSIDGD 117
>SB_10748| Best HMM Match : GETHR (HMM E-Value=1.5)
Length = 126
Score = 26.2 bits (55), Expect = 9.5
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +1
Query: 82 GHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERER 249
G GK+ + +K ++K+ +EK E E QEM K + ++K K E+++
Sbjct: 52 GKTKDGKTKRWKNKRWKNKSMEKQKMEKQEMEKQEMEKQKME-EQKMEKQKMEKQK 106
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,287,213
Number of Sequences: 59808
Number of extensions: 252346
Number of successful extensions: 758
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 681761575
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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