Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_L08
(678 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51398| Best HMM Match : zf-Tim10_DDP (HMM E-Value=2.7e-28) 54 1e-07
SB_14318| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.053
SB_39150| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_25802| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_13660| Best HMM Match : MtrG (HMM E-Value=3.4) 30 1.5
SB_33280| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_7010| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_40317| Best HMM Match : Sod_Fe_N (HMM E-Value=9.2) 28 8.0
SB_22851| Best HMM Match : Sad1_UNC (HMM E-Value=0) 28 8.0
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_2792| Best HMM Match : Sod_Fe_N (HMM E-Value=3.5) 28 8.0
SB_57471| Best HMM Match : TatC (HMM E-Value=0.27) 28 8.0
SB_42862| Best HMM Match : Sod_Fe_N (HMM E-Value=5.7) 28 8.0
SB_25197| Best HMM Match : TatC (HMM E-Value=1.8) 28 8.0
SB_12641| Best HMM Match : Sod_Fe_N (HMM E-Value=9.2) 28 8.0
SB_9675| Best HMM Match : Notch (HMM E-Value=0.27) 28 8.0
>SB_51398| Best HMM Match : zf-Tim10_DDP (HMM E-Value=2.7e-28)
Length = 143
Score = 53.6 bits (123), Expect = 1e-07
Identities = 22/37 (59%), Positives = 29/37 (78%)
Frame = +2
Query: 479 SFFQSVCVLGYCLLPVAVSLIICRVILFSTQTTFPFL 589
SFFQSVCVLGYC+LP+ +SL +CR+IL + Q F+
Sbjct: 2 SFFQSVCVLGYCILPLDISLTVCRLILLAKQNLALFI 38
>SB_14318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 341
Score = 35.1 bits (77), Expect = 0.053
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 7/122 (5%)
Frame = +2
Query: 200 DEPIKETFHRDLRAVGNKFYHVLIPREKSS--LLKEWDLWGPLMLCTLMATMLQGSTDTA 373
+ P+ E +L + K VL P + + ++ + DL GPL+ C +L
Sbjct: 173 EPPLLEELGLNLDHIWQKTLSVLHPLKPTDQHIMDDTDLGGPLLFCLAFGGIL------- 225
Query: 374 DSVNDGGPEFAEVFVIVWIGAAVVTLNSKLLG-GNISFFQSVCVLGYCLLPV----AVSL 538
+ G F ++ +G + L+ ++SF V VLGYCLLP+ A++L
Sbjct: 226 --LLHGKVTFGYIYGYSLLGCIAMYAILNLMSLADVSFSTVVSVLGYCLLPMVGLSAIAL 283
Query: 539 II 544
I+
Sbjct: 284 IV 285
>SB_39150| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 113
Score = 32.3 bits (70), Expect = 0.37
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +2
Query: 131 IEGEMTIPNRAAPSGDSMEFNTLDEPIKETFHRD 232
+EG++T+P AP D E +TLDEP+ ET R+
Sbjct: 17 VEGDITVPG--APEEDE-EPSTLDEPVTETLERN 47
>SB_25802| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -1
Query: 525 TGRRQYPNTQTDWKNEMLPPSSLEFKVTTAAPIH-TITNTSANSGPPSLTESAV--SVEP 355
T Y T + +E +S TAAP++ + T TSA++ PPS T ++V S EP
Sbjct: 56 TATPSYVTTAPVYSSETTTAASAYPSSYTAAPVYLSETTTSASAYPPSYTAASVSTSTEP 115
Query: 354 W 352
+
Sbjct: 116 Y 116
>SB_13660| Best HMM Match : MtrG (HMM E-Value=3.4)
Length = 567
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -2
Query: 641 RGKSSPHEADQ*YDEPQEEKEMLS 570
RGK H++D YDE +EEK+ +S
Sbjct: 90 RGKKRSHDSDDDYDEEEEEKDDVS 113
>SB_33280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/80 (22%), Positives = 35/80 (43%)
Frame = -1
Query: 531 TATGRRQYPNTQTDWKNEMLPPSSLEFKVTTAAPIHTITNTSANSGPPSLTESAVSVEPW 352
T T + P T T+ P+++ TT TIT + + P+ T + + P
Sbjct: 29 TTTKTTEEPTTITETTTTTEEPTTITETTTTTEEPTTITEITTTTEEPTTTTTTAAETPT 88
Query: 351 SIVAINVQSISGPHRSHSFN 292
+I+ N + +R+++ N
Sbjct: 89 TIMRHNNRRTDNNNRNNNNN 108
>SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2317
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/86 (25%), Positives = 34/86 (39%)
Frame = -1
Query: 561 NRITRQMIRETATGRRQYPNTQTDWKNEMLPPSSLEFKVTTAAPIHTITNTSANSGPPSL 382
N + R M TA T + + + TTAAPI T T+A
Sbjct: 1464 NTVPRSMDGTTAAPMSMDGTTAVPMSTDGTTAAPISTDGTTAAPISTDGTTAAPISTDGT 1523
Query: 381 TESAVSVEPWSIVAINVQSISGPHRS 304
T S +S++ ++V I+ + RS
Sbjct: 1524 TVSPMSIDRTTVVPISTGGTTTAPRS 1549
>SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 28.7 bits (61), Expect = 4.6
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +2
Query: 86 FDTRFDMYPSGDVGVIEGEMTIPNRAAPSGDSMEFNTLDEPIKETFHRDLRAVGN--KFY 259
F R + G G+ G+ T+ R A G S+ +++ + + DLR+ GN KFY
Sbjct: 22 FHGRVAIVTGGASGI--GKATV-ERLAREGASVAILDINDELGQQVETDLRSSGNKVKFY 78
Query: 260 HV 265
HV
Sbjct: 79 HV 80
>SB_7010| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 579
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 320 LMLCTLMATMLQGSTDTADSVND 388
LM C ++ +LQG TD DS+N+
Sbjct: 463 LMRCMQLSILLQGMTDIIDSINE 485
>SB_40317| Best HMM Match : Sod_Fe_N (HMM E-Value=9.2)
Length = 105
Score = 27.9 bits (59), Expect = 8.0
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -1
Query: 495 TDWKNEMLPPSSLEFKVTTAAPIHTITNTSANSGPPSLTESAVSVEPWSIVAINVQSISG 316
T+W N +L P+SL+ T A IH T P L + V + A+ QS++
Sbjct: 36 TEWNNFILSPNSLQ---TYADAIHNKDGTVRPITRPGLNQRVVYNGHKRVHALKYQSVAL 92
Query: 315 PH 310
P+
Sbjct: 93 PN 94
>SB_22851| Best HMM Match : Sad1_UNC (HMM E-Value=0)
Length = 1705
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -3
Query: 664 LTVPEDFVAAKVAHMKPTSDMTSLKKKRKCCLSTE*NNAADDQRNS 527
+ V E+FVA KV+ + + K LSTE N A D+ ++S
Sbjct: 478 VNVSEEFVAKKVSEPPGNTGEVTGDSKEDDSLSTELNQADDETKSS 523
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 27.9 bits (59), Expect = 8.0
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +2
Query: 113 SGDVGVIEG--EMTIPNRAAPSGDSMEFNTLDEPIKETFHRDLRAVGNKFYHVLIPREKS 286
SG+V E E T+P+ AA DS EF+ L E + E + ++ +G + + +
Sbjct: 546 SGNVSDTERTEESTLPSEAALP-DSHEFSALSEDVSEKTLQGIKDMGFTTMTEIQHKSIA 604
Query: 287 SLLKEWDLWG 316
LLK DL G
Sbjct: 605 PLLKGRDLLG 614
>SB_2792| Best HMM Match : Sod_Fe_N (HMM E-Value=3.5)
Length = 290
Score = 27.9 bits (59), Expect = 8.0
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -1
Query: 495 TDWKNEMLPPSSLEFKVTTAAPIHTITNTSANSGPPSLTESAVSVEPWSIVAINVQSISG 316
T+W N +L P+SL+ T A IH T P L + V + A+ QS++
Sbjct: 143 TEWNNFILSPNSLQ---TYADAIHNKDGTVRPITRPGLNQRVVYNGHKRVHALKYQSVAL 199
Query: 315 PH 310
P+
Sbjct: 200 PN 201
>SB_57471| Best HMM Match : TatC (HMM E-Value=0.27)
Length = 687
Score = 27.9 bits (59), Expect = 8.0
Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 6/128 (4%)
Frame = -1
Query: 483 NEMLPPS-SLEFKVTTAAPIHTITNTSANSGPPSLTESAVSVE-----PWSIVAINVQSI 322
N LPP+ TTA ++ N + +LT S++S SI++ N I
Sbjct: 74 NTTLPPAPDATSTATTAISPSSVANMTTLVSSVNLTRSSLSTTLIPSISTSILSYNTTVI 133
Query: 321 SGPHRSHSFNKLDFSLGMRTW*NLFPTALRSR*NVSLIGSSSVLNSILSPDGAARFGIVI 142
P+ + S + N PT + N++LI + +V ++ + A G +I
Sbjct: 134 ETPNTTRFVTSTILSFTVNVSAN--PTTSLIQPNITLITTMAVNDTSRTTPTGAVVGTMI 191
Query: 141 SPSITPTS 118
+PS TS
Sbjct: 192 TPSPNITS 199
>SB_42862| Best HMM Match : Sod_Fe_N (HMM E-Value=5.7)
Length = 104
Score = 27.9 bits (59), Expect = 8.0
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -1
Query: 495 TDWKNEMLPPSSLEFKVTTAAPIHTITNTSANSGPPSLTESAVSVEPWSIVAINVQSISG 316
T+W N +L P+SL+ T A IH T P L + V + A+ QS++
Sbjct: 35 TEWNNFILSPNSLQ---TYADAIHNKDGTVRPITRPGLNQRVVYNGHKRVHALKYQSVAL 91
Query: 315 PH 310
P+
Sbjct: 92 PN 93
>SB_25197| Best HMM Match : TatC (HMM E-Value=1.8)
Length = 622
Score = 27.9 bits (59), Expect = 8.0
Identities = 30/134 (22%), Positives = 55/134 (41%), Gaps = 5/134 (3%)
Frame = -1
Query: 504 NTQTDWKNEMLPPSSLEFKVTTAAPIHTITNTSANSGPPSLTESAVSVE-----PWSIVA 340
+T + + P TTA ++ N + +LT S++S SI++
Sbjct: 149 STSVSYNTTLTPAPDAASTATTAISPSSVGNMTTLVSSVNLTRSSLSTTLIPSISTSILS 208
Query: 339 INVQSISGPHRSHSFNKLDFSLGMRTW*NLFPTALRSR*NVSLIGSSSVLNSILSPDGAA 160
N I+ P + S + N PT + N++LI + +V ++ + +A
Sbjct: 209 YNTTVIATPDTTRFVTSTISSFTLNVSAN--PTTSLIQQNITLITTKAVNDTSRTTSTSA 266
Query: 159 RFGIVISPSITPTS 118
G +I+PS TS
Sbjct: 267 VVGTMITPSPNITS 280
>SB_12641| Best HMM Match : Sod_Fe_N (HMM E-Value=9.2)
Length = 105
Score = 27.9 bits (59), Expect = 8.0
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -1
Query: 495 TDWKNEMLPPSSLEFKVTTAAPIHTITNTSANSGPPSLTESAVSVEPWSIVAINVQSISG 316
T+W N +L P+SL+ T A IH T P L + V + A+ QS++
Sbjct: 36 TEWNNFILSPNSLQ---TYADAIHNKDGTVRPITRPGLNQRVVYNGHKRVHALKYQSVAL 92
Query: 315 PH 310
P+
Sbjct: 93 PN 94
>SB_9675| Best HMM Match : Notch (HMM E-Value=0.27)
Length = 223
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = -1
Query: 489 WKNEMLPPSSLEFKVTTAAPIHTITNTSANSGPPSLTESAVSVEPWSIVAINVQSISGPH 310
WK PP+ E VTT +P T+T+ S+ + S + + V + V I+ P
Sbjct: 92 WKEIAAPPN--EITVTTPSPSSTVTSMSSVTSIQSSSTTTTQVSASVTTSDTVICITRPA 149
Query: 309 RSH 301
+H
Sbjct: 150 FAH 152
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,686,259
Number of Sequences: 59808
Number of extensions: 454592
Number of successful extensions: 1137
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1135
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1745338465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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