BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I09A02NGRL0001_L08 (678 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z81137-10|CAB03470.2| 232|Caenorhabditis elegans Hypothetical p... 143 1e-34 Z74031-15|CAE45046.1| 261|Caenorhabditis elegans Hypothetical p... 45 4e-05 AL117207-21|CAN99696.1| 255|Caenorhabditis elegans Hypothetical... 43 2e-04 AL117207-20|CAB60403.3| 228|Caenorhabditis elegans Hypothetical... 37 0.012 Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical pr... 30 1.3 U28737-8|ABA61869.1| 537|Caenorhabditis elegans Hypothetical pr... 29 2.3 U28737-7|ABA61870.1| 501|Caenorhabditis elegans Hypothetical pr... 29 2.3 AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical... 29 3.0 U80441-1|AAB37651.1| 647|Caenorhabditis elegans Hypothetical pr... 29 4.0 AL032654-1|CAA21717.2| 179|Caenorhabditis elegans Hypothetical ... 28 5.3 >Z81137-10|CAB03470.2| 232|Caenorhabditis elegans Hypothetical protein W02D9.2 protein. Length = 232 Score = 143 bits (346), Expect = 1e-34 Identities = 68/153 (44%), Positives = 99/153 (64%), Gaps = 4/153 (2%) Frame = +2 Query: 113 SGDVGVIEGEMTIPNRAAPSGD---SMEFNTLDEPIKETFHRDLRAVGNKFYHVLIPR-E 280 SG++ + + NR P + EF+TL+EP+ +T RD+ VG KF HV++P + Sbjct: 27 SGNIAGMSAPKSSSNRRGPMQEVDLDAEFDTLEEPVWDTVKRDVLTVGAKFTHVVLPHGD 86 Query: 281 KSSLLKEWDLWGPLMLCTLMATMLQGSTDTADSVNDGGPEFAEVFVIVWIGAAVVTLNSK 460 K LL++WDLWGPL +C +A +LQ + T + P+F +VF I + G+ +VT N K Sbjct: 87 KQQLLRDWDLWGPLFICVGLALLLQHNGGT-----ESAPQFTQVFTITFFGSVIVTANIK 141 Query: 461 LLGGNISFFQSVCVLGYCLLPVAVSLIICRVIL 559 LLGGNISFFQS+CV+GYCLLP V+ ++C + L Sbjct: 142 LLGGNISFFQSLCVIGYCLLPPFVAAVLCSLFL 174 Score = 31.1 bits (67), Expect = 0.76 Identities = 13/32 (40%), Positives = 22/32 (68%) Frame = +3 Query: 546 AALFYSVLRQHFLFFLRLVISLVGFMWATFAA 641 AA+ S+ F LRL+I+ +GF+W+T+A+ Sbjct: 166 AAVLCSLFLHGIAFPLRLLITSIGFVWSTYAS 197 >Z74031-15|CAE45046.1| 261|Caenorhabditis elegans Hypothetical protein F32D8.14 protein. Length = 261 Score = 45.2 bits (102), Expect = 4e-05 Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 4/146 (2%) Frame = +2 Query: 137 GEMTIPNRAAPSGDSMEFNTLDEPIKETFHRDLRAVGNKFYHVLIPREKSSL--LKEWDL 310 G IPN A + D ++ + P+ E + + K VL P +++ + + DL Sbjct: 72 GTGAIPN-AGVAADGEDYEN-EPPLLEELGINFSHIKEKTIAVLNPTGSATVEVIADQDL 129 Query: 311 WGPLMLCTLM--ATMLQGSTDTADSVNDGGPEFAEVFVIVWIGAAVVTLNSKLLGGNISF 484 GPL+ C L A +L G GG ++ ++ + A + K NISF Sbjct: 130 AGPLVFCLLFGAALLLHGKLSFGFIYGVGGLGCVGIYALMNLMAT----DEK----NISF 181 Query: 485 FQSVCVLGYCLLPVAVSLIICRVILF 562 + VLGYCLLP+A+ I+ V+ F Sbjct: 182 TCTASVLGYCLLPMALLSIVTAVLSF 207 >AL117207-21|CAN99696.1| 255|Caenorhabditis elegans Hypothetical protein Y60A3A.19b protein. Length = 255 Score = 43.2 bits (97), Expect = 2e-04 Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 7/120 (5%) Frame = +2 Query: 206 PIKETFHRDLRAVGNKFYHVLIP----REKSSLLKEW-DLWGPLMLCTLMATM-LQGSTD 367 P+ E DL + K VL+P R K ++++E D WGPL + A + L G Sbjct: 87 PLLEELDIDLTDIYYKIRCVLLPLPYFRMKLNIVRESPDFWGPLAVVLAFAILSLYGQFG 146 Query: 368 TADSVNDGGPEFAEVFVIVWI-GAAVVTLNSKLLGGNISFFQSVCVLGYCLLPVAVSLII 544 + + +W G +V ++ LGG++ + Q + ++GYCL+P+ V+ +I Sbjct: 147 VVSWI-----------ITIWFCGGFMVYFIARALGGDVGYSQVLGIVGYCLIPLVVTSLI 195 >AL117207-20|CAB60403.3| 228|Caenorhabditis elegans Hypothetical protein Y60A3A.19a protein. Length = 228 Score = 37.1 bits (82), Expect = 0.012 Identities = 14/44 (31%), Positives = 29/44 (65%), Gaps = 1/44 (2%) Frame = +2 Query: 416 VIVWI-GAAVVTLNSKLLGGNISFFQSVCVLGYCLLPVAVSLII 544 + +W G +V ++ LGG++ + Q + ++GYCL+P+ V+ +I Sbjct: 125 ITIWFCGGFMVYFIARALGGDVGYSQVLGIVGYCLIPLVVTSLI 168 >Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical protein Y53C12A.3 protein. Length = 557 Score = 30.3 bits (65), Expect = 1.3 Identities = 31/130 (23%), Positives = 51/130 (39%), Gaps = 4/130 (3%) Frame = +2 Query: 221 FHRDLRAVGNKFYHVLIPREKSSLLKEWDLWGPLML-CTLMATMLQGSTDTADSVNDG-- 391 F D V + IPR+ S + DL+GP ML T++A +L + + +G Sbjct: 98 FDVDPAEVRTRLIRSFIPRKPSQIQVSPDLYGPTMLVLTMVALLLYNMKTSGIVIQNGTL 157 Query: 392 -GPEFAEVFVIVWIGAAVVTLNSKLLGGNISFFQSVCVLGYCLLPVAVSLIICRVILFST 568 G F + + + + LL F + GY L + L++ + S Sbjct: 158 MGTAMFTCFGSWMLISGALWIACFLLAAEQPFLTILSSFGYSLTSQCLVLLLTSLFHSSH 217 Query: 569 QTTFPFLLEA 598 F F+L A Sbjct: 218 DHLFFFVLLA 227 >U28737-8|ABA61869.1| 537|Caenorhabditis elegans Hypothetical protein F14B8.5a protein. Length = 537 Score = 29.5 bits (63), Expect = 2.3 Identities = 16/47 (34%), Positives = 26/47 (55%) Frame = +2 Query: 422 VWIGAAVVTLNSKLLGGNISFFQSVCVLGYCLLPVAVSLIICRVILF 562 V+ GA +N +G +F VLG CLL +A+ LI+C ++ + Sbjct: 361 VYNGACAAAVNVNNVGVAYAFRTWTIVLG-CLLGIALLLILCLILAY 406 >U28737-7|ABA61870.1| 501|Caenorhabditis elegans Hypothetical protein F14B8.5b protein. Length = 501 Score = 29.5 bits (63), Expect = 2.3 Identities = 16/47 (34%), Positives = 26/47 (55%) Frame = +2 Query: 422 VWIGAAVVTLNSKLLGGNISFFQSVCVLGYCLLPVAVSLIICRVILF 562 V+ GA +N +G +F VLG CLL +A+ LI+C ++ + Sbjct: 325 VYNGACAAAVNVNNVGVAYAFRTWTIVLG-CLLGIALLLILCLILAY 370 >AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical protein Y43F8C.16 protein. Length = 370 Score = 29.1 bits (62), Expect = 3.0 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Frame = -1 Query: 468 PSSLEFKVTTAAPIHTITNTSA-NSGPPSLTESAVSVEPWSIV 343 PS+++ TTA P TIT+T+ S S+ +S + EP S + Sbjct: 203 PSTVQ-STTTAEPTSTITSTTVPESSTTSVVQSTTTAEPTSTI 244 >U80441-1|AAB37651.1| 647|Caenorhabditis elegans Hypothetical protein F27C1.6 protein. Length = 647 Score = 28.7 bits (61), Expect = 4.0 Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 1/34 (2%) Frame = +2 Query: 209 IKETFHRDLRAVGNKFYHVLIPREK-SSLLKEWD 307 I+E +R ++ + +K YH ++ REK LLKE+D Sbjct: 191 IQEAKNRYMKKIKSKGYHRILKREKRKQLLKEFD 224 >AL032654-1|CAA21717.2| 179|Caenorhabditis elegans Hypothetical protein Y52B11A.1 protein. Length = 179 Score = 28.3 bits (60), Expect = 5.3 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Frame = +2 Query: 476 ISFFQSV-CVLGYCLLPVAVSLIICRVILFSTQTTFPFLLEARHITGR 616 IS S+ VL C PVA+ + CRV+L T F++ R T + Sbjct: 61 ISLVTSISAVLAICDNPVAIIVYGCRVMLILGFVTTRFIISMRDFTSK 108 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,057,368 Number of Sequences: 27780 Number of extensions: 346114 Number of successful extensions: 1017 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 932 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1013 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1539654388 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -