Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_L08
(678 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81137-10|CAB03470.2| 232|Caenorhabditis elegans Hypothetical p... 143 1e-34
Z74031-15|CAE45046.1| 261|Caenorhabditis elegans Hypothetical p... 45 4e-05
AL117207-21|CAN99696.1| 255|Caenorhabditis elegans Hypothetical... 43 2e-04
AL117207-20|CAB60403.3| 228|Caenorhabditis elegans Hypothetical... 37 0.012
Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical pr... 30 1.3
U28737-8|ABA61869.1| 537|Caenorhabditis elegans Hypothetical pr... 29 2.3
U28737-7|ABA61870.1| 501|Caenorhabditis elegans Hypothetical pr... 29 2.3
AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical... 29 3.0
U80441-1|AAB37651.1| 647|Caenorhabditis elegans Hypothetical pr... 29 4.0
AL032654-1|CAA21717.2| 179|Caenorhabditis elegans Hypothetical ... 28 5.3
>Z81137-10|CAB03470.2| 232|Caenorhabditis elegans Hypothetical
protein W02D9.2 protein.
Length = 232
Score = 143 bits (346), Expect = 1e-34
Identities = 68/153 (44%), Positives = 99/153 (64%), Gaps = 4/153 (2%)
Frame = +2
Query: 113 SGDVGVIEGEMTIPNRAAPSGD---SMEFNTLDEPIKETFHRDLRAVGNKFYHVLIPR-E 280
SG++ + + NR P + EF+TL+EP+ +T RD+ VG KF HV++P +
Sbjct: 27 SGNIAGMSAPKSSSNRRGPMQEVDLDAEFDTLEEPVWDTVKRDVLTVGAKFTHVVLPHGD 86
Query: 281 KSSLLKEWDLWGPLMLCTLMATMLQGSTDTADSVNDGGPEFAEVFVIVWIGAAVVTLNSK 460
K LL++WDLWGPL +C +A +LQ + T + P+F +VF I + G+ +VT N K
Sbjct: 87 KQQLLRDWDLWGPLFICVGLALLLQHNGGT-----ESAPQFTQVFTITFFGSVIVTANIK 141
Query: 461 LLGGNISFFQSVCVLGYCLLPVAVSLIICRVIL 559
LLGGNISFFQS+CV+GYCLLP V+ ++C + L
Sbjct: 142 LLGGNISFFQSLCVIGYCLLPPFVAAVLCSLFL 174
Score = 31.1 bits (67), Expect = 0.76
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +3
Query: 546 AALFYSVLRQHFLFFLRLVISLVGFMWATFAA 641
AA+ S+ F LRL+I+ +GF+W+T+A+
Sbjct: 166 AAVLCSLFLHGIAFPLRLLITSIGFVWSTYAS 197
>Z74031-15|CAE45046.1| 261|Caenorhabditis elegans Hypothetical
protein F32D8.14 protein.
Length = 261
Score = 45.2 bits (102), Expect = 4e-05
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 4/146 (2%)
Frame = +2
Query: 137 GEMTIPNRAAPSGDSMEFNTLDEPIKETFHRDLRAVGNKFYHVLIPREKSSL--LKEWDL 310
G IPN A + D ++ + P+ E + + K VL P +++ + + DL
Sbjct: 72 GTGAIPN-AGVAADGEDYEN-EPPLLEELGINFSHIKEKTIAVLNPTGSATVEVIADQDL 129
Query: 311 WGPLMLCTLM--ATMLQGSTDTADSVNDGGPEFAEVFVIVWIGAAVVTLNSKLLGGNISF 484
GPL+ C L A +L G GG ++ ++ + A + K NISF
Sbjct: 130 AGPLVFCLLFGAALLLHGKLSFGFIYGVGGLGCVGIYALMNLMAT----DEK----NISF 181
Query: 485 FQSVCVLGYCLLPVAVSLIICRVILF 562
+ VLGYCLLP+A+ I+ V+ F
Sbjct: 182 TCTASVLGYCLLPMALLSIVTAVLSF 207
>AL117207-21|CAN99696.1| 255|Caenorhabditis elegans Hypothetical
protein Y60A3A.19b protein.
Length = 255
Score = 43.2 bits (97), Expect = 2e-04
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 7/120 (5%)
Frame = +2
Query: 206 PIKETFHRDLRAVGNKFYHVLIP----REKSSLLKEW-DLWGPLMLCTLMATM-LQGSTD 367
P+ E DL + K VL+P R K ++++E D WGPL + A + L G
Sbjct: 87 PLLEELDIDLTDIYYKIRCVLLPLPYFRMKLNIVRESPDFWGPLAVVLAFAILSLYGQFG 146
Query: 368 TADSVNDGGPEFAEVFVIVWI-GAAVVTLNSKLLGGNISFFQSVCVLGYCLLPVAVSLII 544
+ + +W G +V ++ LGG++ + Q + ++GYCL+P+ V+ +I
Sbjct: 147 VVSWI-----------ITIWFCGGFMVYFIARALGGDVGYSQVLGIVGYCLIPLVVTSLI 195
>AL117207-20|CAB60403.3| 228|Caenorhabditis elegans Hypothetical
protein Y60A3A.19a protein.
Length = 228
Score = 37.1 bits (82), Expect = 0.012
Identities = 14/44 (31%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +2
Query: 416 VIVWI-GAAVVTLNSKLLGGNISFFQSVCVLGYCLLPVAVSLII 544
+ +W G +V ++ LGG++ + Q + ++GYCL+P+ V+ +I
Sbjct: 125 ITIWFCGGFMVYFIARALGGDVGYSQVLGIVGYCLIPLVVTSLI 168
>Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical
protein Y53C12A.3 protein.
Length = 557
Score = 30.3 bits (65), Expect = 1.3
Identities = 31/130 (23%), Positives = 51/130 (39%), Gaps = 4/130 (3%)
Frame = +2
Query: 221 FHRDLRAVGNKFYHVLIPREKSSLLKEWDLWGPLML-CTLMATMLQGSTDTADSVNDG-- 391
F D V + IPR+ S + DL+GP ML T++A +L + + +G
Sbjct: 98 FDVDPAEVRTRLIRSFIPRKPSQIQVSPDLYGPTMLVLTMVALLLYNMKTSGIVIQNGTL 157
Query: 392 -GPEFAEVFVIVWIGAAVVTLNSKLLGGNISFFQSVCVLGYCLLPVAVSLIICRVILFST 568
G F + + + + LL F + GY L + L++ + S
Sbjct: 158 MGTAMFTCFGSWMLISGALWIACFLLAAEQPFLTILSSFGYSLTSQCLVLLLTSLFHSSH 217
Query: 569 QTTFPFLLEA 598
F F+L A
Sbjct: 218 DHLFFFVLLA 227
>U28737-8|ABA61869.1| 537|Caenorhabditis elegans Hypothetical
protein F14B8.5a protein.
Length = 537
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +2
Query: 422 VWIGAAVVTLNSKLLGGNISFFQSVCVLGYCLLPVAVSLIICRVILF 562
V+ GA +N +G +F VLG CLL +A+ LI+C ++ +
Sbjct: 361 VYNGACAAAVNVNNVGVAYAFRTWTIVLG-CLLGIALLLILCLILAY 406
>U28737-7|ABA61870.1| 501|Caenorhabditis elegans Hypothetical
protein F14B8.5b protein.
Length = 501
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +2
Query: 422 VWIGAAVVTLNSKLLGGNISFFQSVCVLGYCLLPVAVSLIICRVILF 562
V+ GA +N +G +F VLG CLL +A+ LI+C ++ +
Sbjct: 325 VYNGACAAAVNVNNVGVAYAFRTWTIVLG-CLLGIALLLILCLILAY 370
>AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical
protein Y43F8C.16 protein.
Length = 370
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -1
Query: 468 PSSLEFKVTTAAPIHTITNTSA-NSGPPSLTESAVSVEPWSIV 343
PS+++ TTA P TIT+T+ S S+ +S + EP S +
Sbjct: 203 PSTVQ-STTTAEPTSTITSTTVPESSTTSVVQSTTTAEPTSTI 244
>U80441-1|AAB37651.1| 647|Caenorhabditis elegans Hypothetical
protein F27C1.6 protein.
Length = 647
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +2
Query: 209 IKETFHRDLRAVGNKFYHVLIPREK-SSLLKEWD 307
I+E +R ++ + +K YH ++ REK LLKE+D
Sbjct: 191 IQEAKNRYMKKIKSKGYHRILKREKRKQLLKEFD 224
>AL032654-1|CAA21717.2| 179|Caenorhabditis elegans Hypothetical
protein Y52B11A.1 protein.
Length = 179
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 476 ISFFQSV-CVLGYCLLPVAVSLIICRVILFSTQTTFPFLLEARHITGR 616
IS S+ VL C PVA+ + CRV+L T F++ R T +
Sbjct: 61 ISLVTSISAVLAICDNPVAIIVYGCRVMLILGFVTTRFIISMRDFTSK 108
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,057,368
Number of Sequences: 27780
Number of extensions: 346114
Number of successful extensions: 1017
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1013
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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