Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_L08
         (678 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    24   1.2  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   2.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   3.5  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   6.2  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   6.2  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   6.2  

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 419 IVWIGAAVVTLNSKLLGGN 475
           +VW+GAA ++L   L+ GN
Sbjct: 164 LVWLGAACISLPPLLIMGN 182


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 14/52 (26%), Positives = 23/52 (44%)
 Frame = -1

Query: 471 PPSSLEFKVTTAAPIHTITNTSANSGPPSLTESAVSVEPWSIVAINVQSISG 316
           PP S E    ++ P   ++    +  PP+   S VS    S +   V+S +G
Sbjct: 355 PPKSSESSTGSSIPKLNLSTALMSQPPPNFGVSQVSPVSMSALVSAVRSPAG 406


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +2

Query: 137  GEMTIPNRAAPSGDSMEFNTLDEPIKETFHRDLRA 241
            G +  PNR  P      +NT D   + T  R +R+
Sbjct: 1644 GYIAPPNRKLPPVPGSNYNTCDRIKRGTVIRSIRS 1678


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 92  CRNYSFFRYKFTLSSIK 42
           C NY  F YK  ++S K
Sbjct: 495 CMNYERFTYKININSDK 511


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 92  CRNYSFFRYKFTLSSIK 42
           C NY  F YK  ++S K
Sbjct: 495 CMNYERFTYKININSDK 511


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
 Frame = -1

Query: 312 HRSHSFNKLDFSLGMRTW*NLFPTAL--RSR*NVSLIGSSSVLNSILSPDGAARFGIVIS 139
           HR  +   +D  +GMRT+ +    A+  R R N +L   +  +  +  PD       +  
Sbjct: 89  HRKIAARLIDIFMGMRTYEDFLSVAVYCRDRLNPNLFIYALSVAILHRPDTKD----LPV 144

Query: 138 PSITPTSPDGYISN 97
           P +T   PD Y+ +
Sbjct: 145 PPLTEVFPDKYMDS 158


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,201
Number of Sequences: 438
Number of extensions: 4024
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)