Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_L07
         (665 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              35   8e-04
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   2.6  
EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    22   4.6  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          22   4.6  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   6.0  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   6.0  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    21   8.0  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    21   8.0  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 34.7 bits (76), Expect = 8e-04
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = +2

Query: 263 CTLEYAPVCGSNGKTYANKCSL 328
           C   + PVC SNGK YAN C L
Sbjct: 110 CPRRHRPVCASNGKIYANHCEL 131



 Score = 33.5 bits (73), Expect = 0.002
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +2

Query: 119 CGKIYSPVCGSDGKTYENPCEFYCEKDKTHSNMTIVKN 232
           C + + PVC S+GK Y N CE +  +   HS  ++ K+
Sbjct: 110 CPRRHRPVCASNGKIYANHCELH--RAACHSGSSLTKS 145



 Score = 30.3 bits (65), Expect = 0.017
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
 Frame = +2

Query: 377 ECQGAKLASLHPCICTRE----KDPVCGSDGVTYSNLCLLKCAS 496
           EC+ +  +++  C+C R+      PVC S+G  Y+N C L  A+
Sbjct: 92  ECELSPNSTIAVCVCMRKCPRRHRPVCASNGKIYANHCELHRAA 135


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = +2

Query: 566 N*NHSNKYIVTDAN*RENV*NNKYSVFNVEFQL 664
           N    N+Y++  ++  +NV NN  ++ +V FQ+
Sbjct: 368 NNTQRNEYLLALSDRNQNVLNNDLNLEHVNFQI 400


>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = -1

Query: 335 CIPVNICWRKFFR*SHRRGHIPRYSSRGCPP 243
           C+  +I W KF +    R   P Y   G  P
Sbjct: 41  CVGDDIAWMKFDKEGRLRAINPEYGFFGVAP 71


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = +2

Query: 119 CGKIYSPVCGSDGKTYENPCEFYCEKDKT 205
           C   Y      DG +Y N  E  C +D++
Sbjct: 230 CHSRYEDSRHEDGNSYRNDGERSCSRDRS 258


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 435 SFSRVHIHGCKL 400
           S   +H+HGCK+
Sbjct: 93  SLHELHVHGCKV 104


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -1

Query: 122 RKYITAVAELLPSILAQRRSEEYRVYSFCV 33
           RK  T    ++ S   Q++SEE  +   CV
Sbjct: 795 RKTATTTQPVISSRKEQKKSEEKNINDHCV 824


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 356 LKMEHDGECQGAKLASLHP 412
           L+M  DG C+     S HP
Sbjct: 106 LRMSADGGCRNFSTCSSHP 124


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 356 LKMEHDGECQGAKLASLHP 412
           L+M  DG C+     S HP
Sbjct: 105 LRMSADGGCRNFSTCSSHP 123


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,258
Number of Sequences: 438
Number of extensions: 4988
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)