Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_L06
         (565 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   4.2  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   9.6  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   9.6  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = +3

Query: 495 HWWNQRAYFEIVNKQFGPYL 554
           H+W+  + F+  +  FGP++
Sbjct: 175 HFWHSHSGFQRSDGTFGPFI 194


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -3

Query: 320 ITDYADFTLSNQLIR 276
           + D A+FTLS Q+++
Sbjct: 256 VKDQAEFTLSGQVMK 270



 Score = 20.6 bits (41), Expect = 9.6
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 555 SNMVRIACSQFQSTPSGSTNEGLF 484
           S + ++ C  FQ+T S S++   F
Sbjct: 395 SVVTKVTCELFQATLSSSSDTNRF 418


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -3

Query: 401 FKSICISEIDKLYLFTQ 351
           FK+  +SE+ K +LFTQ
Sbjct: 455 FKNENLSEMVKQFLFTQ 471


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,091
Number of Sequences: 336
Number of extensions: 2678
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13890653
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)