Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_L04
(369 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q1HPY3 Cluster: Secreted protein acidic and rich in cys... 99 1e-20
UniRef50_Q9GR92 Cluster: SPARC precursor; n=1; Artemia francisca... 82 4e-15
UniRef50_Q8SY75 Cluster: RH45818p; n=7; Endopterygota|Rep: RH458... 82 4e-15
UniRef50_P34714 Cluster: SPARC precursor; n=3; Caenorhabditis|Re... 61 7e-09
UniRef50_UPI000155D28E Cluster: PREDICTED: similar to SPARC-like... 54 1e-06
UniRef50_Q14515 Cluster: SPARC-like protein 1 precursor; n=30; E... 50 2e-05
UniRef50_P23499 Cluster: SPARC-like protein 1 precursor; n=6; Gn... 47 1e-04
UniRef50_A1YIY6 Cluster: SPARCB; n=1; Petromyzon marinus|Rep: SP... 45 4e-04
UniRef50_O93390 Cluster: SPARC precursor; n=10; Euteleostomi|Rep... 45 4e-04
UniRef50_Q6PVV9 Cluster: SPARC; n=1; Ciona intestinalis|Rep: SPA... 44 7e-04
UniRef50_P07214 Cluster: SPARC precursor; n=24; Euteleostomi|Rep... 44 9e-04
UniRef50_Q6PVV6 Cluster: SPARCL1; n=3; Danio rerio|Rep: SPARCL1 ... 43 0.002
UniRef50_P09486 Cluster: SPARC precursor; n=15; Vertebrata|Rep: ... 43 0.002
UniRef50_A0MT19 Cluster: Osteonectin; n=1; Strongylocentrotus pu... 42 0.003
UniRef50_UPI0000F203D2 Cluster: PREDICTED: similar to GA19550-PA... 40 0.014
UniRef50_UPI0000D554C4 Cluster: PREDICTED: similar to CG13830-PA... 40 0.014
UniRef50_Q9VCR3 Cluster: CG13830-PA; n=3; Coelomata|Rep: CG13830... 40 0.019
UniRef50_Q29BN2 Cluster: GA12555-PA; n=1; Drosophila pseudoobscu... 40 0.019
UniRef50_UPI000058484F Cluster: PREDICTED: similar to secreted p... 37 0.10
UniRef50_UPI0000E46655 Cluster: PREDICTED: similar to CG2264A; n... 35 0.41
UniRef50_Q92563 Cluster: Testican-2 precursor; n=27; Euteleostom... 35 0.54
UniRef50_Q4SL34 Cluster: Chromosome 17 SCAF14563, whole genome s... 34 0.72
UniRef50_UPI00015B502F Cluster: PREDICTED: similar to CG2264A; n... 34 0.95
UniRef50_Q13HK4 Cluster: Hydrogenase maturation protein HypF; n=... 33 1.3
UniRef50_Q16N95 Cluster: Secreted modular calcium-binding protei... 33 1.7
UniRef50_Q4RZD2 Cluster: Chromosome 1 SCAF14944, whole genome sh... 33 2.2
UniRef50_A7RFR0 Cluster: Predicted protein; n=1; Nematostella ve... 33 2.2
UniRef50_A3HWE0 Cluster: Putative uncharacterized protein; n=1; ... 31 5.1
UniRef50_A2FCD1 Cluster: 4-alpha-glucanotransferase family prote... 31 5.1
UniRef50_A5BGZ1 Cluster: Putative uncharacterized protein; n=1; ... 31 6.7
UniRef50_Q08629 Cluster: Testican-1 precursor; n=61; Euteleostom... 31 8.9
>UniRef50_Q1HPY3 Cluster: Secreted protein acidic and rich in
cysteine; n=4; Neoptera|Rep: Secreted protein acidic and
rich in cysteine - Bombyx mori (Silk moth)
Length = 317
Score = 99 bits (238), Expect = 1e-20
Identities = 39/53 (73%), Positives = 49/53 (92%)
Frame = +3
Query: 3 PLMSLEHCIAPFLDQCDADEDHRITLAEWGKCLQLDEYELEDRCDEFIDDL*H 161
PLM+LEHCIAPFLD+CDAD+DHR+TLAEWGKCL+LDE E+E+RCD+F ++ H
Sbjct: 263 PLMALEHCIAPFLDRCDADDDHRVTLAEWGKCLELDELEMEERCDDFNENAEH 315
>UniRef50_Q9GR92 Cluster: SPARC precursor; n=1; Artemia
franciscana|Rep: SPARC precursor - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 291
Score = 81.8 bits (193), Expect = 4e-15
Identities = 31/46 (67%), Positives = 41/46 (89%)
Frame = +3
Query: 3 PLMSLEHCIAPFLDQCDADEDHRITLAEWGKCLQLDEYELEDRCDE 140
PLM+LEHCI+PFL++CD D+DH ITL EWGKCL++ E ELED+C++
Sbjct: 237 PLMALEHCISPFLNKCDVDDDHFITLREWGKCLEIPEDELEDKCED 282
>UniRef50_Q8SY75 Cluster: RH45818p; n=7; Endopterygota|Rep: RH45818p
- Drosophila melanogaster (Fruit fly)
Length = 304
Score = 81.8 bits (193), Expect = 4e-15
Identities = 31/46 (67%), Positives = 41/46 (89%)
Frame = +3
Query: 3 PLMSLEHCIAPFLDQCDADEDHRITLAEWGKCLQLDEYELEDRCDE 140
PL+SLEHCIAPFL+ CD+++DHRITL EWG CL+LD +L++RCD+
Sbjct: 249 PLVSLEHCIAPFLESCDSNKDHRITLVEWGACLELDPEDLKERCDD 294
>UniRef50_P34714 Cluster: SPARC precursor; n=3; Caenorhabditis|Rep:
SPARC precursor - Caenorhabditis elegans
Length = 264
Score = 60.9 bits (141), Expect = 7e-09
Identities = 23/44 (52%), Positives = 33/44 (75%)
Frame = +3
Query: 3 PLMSLEHCIAPFLDQCDADEDHRITLAEWGKCLQLDEYELEDRC 134
P++ +E CI PFL+ CDA+ D I++ EWGKCL L E E+++RC
Sbjct: 221 PVIPMESCIKPFLEGCDANNDGNISIKEWGKCLGLKEGEIQERC 264
>UniRef50_UPI000155D28E Cluster: PREDICTED: similar to SPARC-like
protein 1 precursor (Matrix glycoprotein Sc1), partial;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED: similar to
SPARC-like protein 1 precursor (Matrix glycoprotein
Sc1), partial - Ornithorhynchus anatinus
Length = 452
Score = 53.6 bits (123), Expect = 1e-06
Identities = 19/41 (46%), Positives = 30/41 (73%)
Frame = +3
Query: 6 LMSLEHCIAPFLDQCDADEDHRITLAEWGKCLQLDEYELED 128
L+ LEHCI F ++CDAD+D I+L EWG+C + E ++++
Sbjct: 408 LVPLEHCITRFFEECDADQDKHISLREWGQCFGIKEEDVDE 448
>UniRef50_Q14515 Cluster: SPARC-like protein 1 precursor; n=30;
Euteleostomi|Rep: SPARC-like protein 1 precursor - Homo
sapiens (Human)
Length = 664
Score = 49.6 bits (113), Expect = 2e-05
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = +3
Query: 6 LMSLEHCIAPFLDQCDADEDHRITLAEWGKCLQLDEYELED 128
L+ +EHCI F ++CD ++D ITL EWG C + E ++++
Sbjct: 620 LVPMEHCITRFFEECDPNKDKHITLKEWGHCFGIKEEDIDE 660
>UniRef50_P23499 Cluster: SPARC-like protein 1 precursor; n=6;
Gnathostomata|Rep: SPARC-like protein 1 precursor -
Coturnix coturnix japonica (Japanese quail)
Length = 676
Score = 46.8 bits (106), Expect = 1e-04
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +3
Query: 6 LMSLEHCIAPFLDQCDADEDHRITLAEWGKCLQLDEYELED 128
L+ +EHCI F +CD D+D ITL EW C + E ++ +
Sbjct: 632 LVPMEHCITRFFQECDGDQDKLITLKEWCHCFAIKEEDINE 672
>UniRef50_A1YIY6 Cluster: SPARCB; n=1; Petromyzon marinus|Rep:
SPARCB - Petromyzon marinus (Sea lamprey)
Length = 350
Score = 45.2 bits (102), Expect = 4e-04
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +3
Query: 3 PLMSLEHCIAPFLDQCDADEDHRITLAEWGKCLQL 107
PL+ +EHC F +CDAD D I+L EWG C L
Sbjct: 305 PLVPMEHCTTRFFLRCDADGDRLISLPEWGACFGL 339
>UniRef50_O93390 Cluster: SPARC precursor; n=10; Euteleostomi|Rep:
SPARC precursor - Coturnix coturnix japonica (Japanese
quail)
Length = 298
Score = 45.2 bits (102), Expect = 4e-04
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3
Query: 3 PLMSLEHCIAPFLDQCDADEDHRITLAEWGKCLQLDEYELE 125
PL+ +EHC F + CD D D I L EW C + E +++
Sbjct: 253 PLIPMEHCTTRFFEACDLDNDKYIALEEWASCFGIKEKDID 293
>UniRef50_Q6PVV9 Cluster: SPARC; n=1; Ciona intestinalis|Rep: SPARC
- Ciona intestinalis (Transparent sea squirt)
Length = 366
Score = 44.4 bits (100), Expect = 7e-04
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +3
Query: 3 PLMSLEHCIAPFLDQCDADEDHRITLAEWGKCLQLDEYELE 125
PL+ LEHC F DA++DH I+L EW + L L E +++
Sbjct: 320 PLVPLEHCTDTFFSTADANKDHLISLYEWAEALGLQEDDID 360
>UniRef50_P07214 Cluster: SPARC precursor; n=24; Euteleostomi|Rep:
SPARC precursor - Mus musculus (Mouse)
Length = 302
Score = 44.0 bits (99), Expect = 9e-04
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 3 PLMSLEHCIAPFLDQCDADEDHRITLAEWGKCLQLDEYEL 122
PL+ +EHC F + CD D D I L EW C + E ++
Sbjct: 257 PLIPMEHCTTRFFETCDLDNDKYIALEEWAGCFGIKEQDI 296
>UniRef50_Q6PVV6 Cluster: SPARCL1; n=3; Danio rerio|Rep: SPARCL1 -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 224
Score = 43.2 bits (97), Expect = 0.002
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 3 PLMSLEHCIAPFLDQCDADEDHRITLAEWGKCLQLDE 113
PL+ +EHC + F CDAD+D ++ EW C + E
Sbjct: 188 PLVPMEHCTSVFFQMCDADKDKLVSFKEWCSCFGIKE 224
>UniRef50_P09486 Cluster: SPARC precursor; n=15; Vertebrata|Rep:
SPARC precursor - Homo sapiens (Human)
Length = 303
Score = 42.7 bits (96), Expect = 0.002
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 3 PLMSLEHCIAPFLDQCDADEDHRITLAEWGKCLQLDEYELE 125
PL+ +EHC F + CD D D I L EW C + + +++
Sbjct: 258 PLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFGIKQKDID 298
>UniRef50_A0MT19 Cluster: Osteonectin; n=1; Strongylocentrotus
purpuratus|Rep: Osteonectin - Strongylocentrotus
purpuratus (Purple sea urchin)
Length = 271
Score = 42.3 bits (95), Expect = 0.003
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 3 PLMSLEHCIAPFLDQCDADEDHRITLAEWGKCLQLDEYEL 122
P++ E C PFL CD D D I+ E+G+CL L + ++
Sbjct: 230 PIVLFEPCTKPFLQACDVDNDTLISAVEFGRCLNLSDEQV 269
>UniRef50_UPI0000F203D2 Cluster: PREDICTED: similar to GA19550-PA;
n=1; Danio rerio|Rep: PREDICTED: similar to GA19550-PA -
Danio rerio
Length = 259
Score = 39.9 bits (89), Expect = 0.014
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 9 MSLEHCIAPFLDQCDADEDHRITLAEWGKCL 101
M LEHC F CD +++ ++TL EW CL
Sbjct: 200 MPLEHCAQRFFQSCDKNQNKKVTLREWTSCL 230
>UniRef50_UPI0000D554C4 Cluster: PREDICTED: similar to CG13830-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG13830-PA - Tribolium castaneum
Length = 507
Score = 39.9 bits (89), Expect = 0.014
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +3
Query: 18 EHCIAPFLDQCDADEDHRITLAEWGKCLQLDE 113
E C+ PFL QCD D D +T EW +C Q E
Sbjct: 373 EVCLKPFLQQCDIDRDVIVTPLEWCRCFQRTE 404
>UniRef50_Q9VCR3 Cluster: CG13830-PA; n=3; Coelomata|Rep: CG13830-PA
- Drosophila melanogaster (Fruit fly)
Length = 660
Score = 39.5 bits (88), Expect = 0.019
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 18 EHCIAPFLDQCDADEDHRITLAEWGKCLQ 104
E CI PF+D CD D D I EW +C +
Sbjct: 502 ERCIKPFIDTCDLDTDSSINTREWCRCFE 530
>UniRef50_Q29BN2 Cluster: GA12555-PA; n=1; Drosophila
pseudoobscura|Rep: GA12555-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 536
Score = 39.5 bits (88), Expect = 0.019
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 18 EHCIAPFLDQCDADEDHRITLAEWGKCLQ 104
E CI PF+D CD D D I EW +C +
Sbjct: 409 ERCIKPFIDTCDLDTDSAINTREWCRCFE 437
>UniRef50_UPI000058484F Cluster: PREDICTED: similar to secreted
protein acidic and rich in cysteine; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
secreted protein acidic and rich in cysteine -
Strongylocentrotus purpuratus
Length = 259
Score = 37.1 bits (82), Expect = 0.10
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Frame = +3
Query: 6 LMSLEHCIAPFLDQC----DADEDHRITLAEWGKCLQLD 110
LM LEHC APF +C + +I++AEW CL ++
Sbjct: 182 LMPLEHCAAPFFTRCAKRIQGTDTKKISVAEWSGCLNVN 220
>UniRef50_UPI0000E46655 Cluster: PREDICTED: similar to CG2264A; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
CG2264A - Strongylocentrotus purpuratus
Length = 569
Score = 35.1 bits (77), Expect = 0.41
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 6 LMSLEHCIAPFLDQCDADEDHRITLAEWGKCLQL 107
+ S + C FLD CDA++D R+ L EW C +
Sbjct: 514 IKSSKKCRNNFLDFCDANQDSRLALKEWLHCFDI 547
Score = 34.7 bits (76), Expect = 0.54
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 24 CIAPFLDQCDADEDHRITLAEWGKCLQLDEYE 119
C F+ CD D D R+T EW CL +D E
Sbjct: 279 CAKDFVKICDLDADDRLTEMEWSLCLGVDNNE 310
>UniRef50_Q92563 Cluster: Testican-2 precursor; n=27;
Euteleostomi|Rep: Testican-2 precursor - Homo sapiens
(Human)
Length = 424
Score = 34.7 bits (76), Expect = 0.54
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 18 EHCIAPFLDQCDADEDHRITLAEWGKC 98
E CI PF + CD +D R++ AEW C
Sbjct: 279 EVCIRPFFNSCDTYKDGRVSTAEWCFC 305
>UniRef50_Q4SL34 Cluster: Chromosome 17 SCAF14563, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 17
SCAF14563, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 386
Score = 34.3 bits (75), Expect = 0.72
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 18 EHCIAPFLDQCDADEDHRITLAEWGKC 98
E CI PF + CD+ +D +++ AEW C
Sbjct: 243 EVCIRPFFNSCDSYKDGKVSTAEWCLC 269
>UniRef50_UPI00015B502F Cluster: PREDICTED: similar to CG2264A; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to CG2264A -
Nasonia vitripennis
Length = 719
Score = 33.9 bits (74), Expect = 0.95
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 24 CIAPFLDQCDADEDHRITLAEWGKCLQLD 110
C F CD ++D R++ AEWG CL D
Sbjct: 442 CARTFARTCDLNQDLRLSRAEWGACLAND 470
>UniRef50_Q13HK4 Cluster: Hydrogenase maturation protein HypF; n=2;
Proteobacteria|Rep: Hydrogenase maturation protein HypF
- Burkholderia xenovorans (strain LB400)
Length = 812
Score = 33.5 bits (73), Expect = 1.3
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +3
Query: 45 QCDADEDHRITLAEWGKCLQLDEYELEDRCDEFIDDL*HGALRILR 182
QC A++D RI LA + + E+ R D+ + + HG R+LR
Sbjct: 354 QCTANDDARIRLAGMADVFLMHDREIASRIDDSVARVLHGVPRLLR 399
>UniRef50_Q16N95 Cluster: Secreted modular calcium-binding protein;
n=2; Culicidae|Rep: Secreted modular calcium-binding
protein - Aedes aegypti (Yellowfever mosquito)
Length = 598
Score = 33.1 bits (72), Expect = 1.7
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 18 EHCIAPFLDQCDADEDHRITLAEWGKCLQLD 110
+ C F CDAD+D R++ EW C D
Sbjct: 228 KRCGRSFGKSCDADQDERLSRLEWANCFSKD 258
Score = 31.5 bits (68), Expect = 5.1
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 48 CDADEDHRITLAEWGKCLQ 104
CD + D +ITL+EW CLQ
Sbjct: 539 CDVNNDRKITLSEWLNCLQ 557
>UniRef50_Q4RZD2 Cluster: Chromosome 1 SCAF14944, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 1 SCAF14944, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 396
Score = 32.7 bits (71), Expect = 2.2
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 18 EHCIAPFLDQCDADEDHRITLAEWGKCLQLDEYEL 122
E C+ P + CD+ +D +++ EW C Q E EL
Sbjct: 111 EMCMKPLFNSCDSFKDGKLSNNEWCYCFQKPEGEL 145
>UniRef50_A7RFR0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 381
Score = 32.7 bits (71), Expect = 2.2
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +3
Query: 18 EHCIAPFLDQCDADEDHRITLAEWGKCLQLD 110
E+CI F ++CDA +D + +L E+ +C ++
Sbjct: 267 ENCITQFFEKCDATKDGQFSLLEFCECFPIE 297
>UniRef50_A3HWE0 Cluster: Putative uncharacterized protein; n=1;
Algoriphagus sp. PR1|Rep: Putative uncharacterized
protein - Algoriphagus sp. PR1
Length = 997
Score = 31.5 bits (68), Expect = 5.1
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = -1
Query: 297 HRFEQTVKIDKIFFLLNSKSKLQSHVIKSEWRYVEPN---IIVEFSKHHATS 151
H + Q + + FLLN+ L ++ S+WRY+ + I V S HH T+
Sbjct: 135 HVYGQVPTLTGLAFLLNALPFLYQYIKTSDWRYLLMSLAFIAVTVSSHHVTA 186
>UniRef50_A2FCD1 Cluster: 4-alpha-glucanotransferase family protein;
n=11; Trichomonas vaginalis G3|Rep:
4-alpha-glucanotransferase family protein - Trichomonas
vaginalis G3
Length = 1035
Score = 31.5 bits (68), Expect = 5.1
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 57 DEDHRITLAEWGKCLQLDEYELEDRCDEFIDDL 155
D+ H + +W K ++ E+ED CDE I+DL
Sbjct: 517 DQYHTMEFRKWPKYSKVTPEEIEDLCDEEINDL 549
>UniRef50_A5BGZ1 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 1174
Score = 31.1 bits (67), Expect = 6.7
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 6/55 (10%)
Frame = -1
Query: 312 FEDICHRFEQ-TVKID----KIF-FLLNSKSKLQSHVIKSEWRYVEPNIIVEFSK 166
FE++CH F++ T+ ID K+F F L K+K+ S+ ++ + P + EF K
Sbjct: 118 FEEVCHTFQEGTISIDLMRLKLFPFTLKDKAKVWSNYLRPQNIRSWPXLKAEFLK 172
>UniRef50_Q08629 Cluster: Testican-1 precursor; n=61;
Euteleostomi|Rep: Testican-1 precursor - Homo sapiens
(Human)
Length = 439
Score = 30.7 bits (66), Expect = 8.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 18 EHCIAPFLDQCDADEDHRITLAEWGKCLQ 104
E CI P + CD+ +D +++ EW C Q
Sbjct: 278 EPCIKPLFNSCDSFKDGKLSNNEWCYCFQ 306
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 294,621,261
Number of Sequences: 1657284
Number of extensions: 4837417
Number of successful extensions: 12911
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 12672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12909
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 13647406432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -