Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_L04
(369 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin pro... 61 3e-10
AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin (... 61 3e-10
Z72513-1|CAA96669.1| 260|Caenorhabditis elegans Hypothetical pr... 29 0.79
Z82083-6|CAB04974.1| 388|Caenorhabditis elegans Hypothetical pr... 28 2.4
AF038609-2|AAK29794.1| 226|Caenorhabditis elegans Hypothetical ... 27 4.2
AF038609-1|AAO61425.1| 234|Caenorhabditis elegans Hypothetical ... 27 4.2
Z73906-8|CAA98120.3| 511|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr... 26 7.3
Z74476-4|CAA98966.1| 255|Caenorhabditis elegans Hypothetical pr... 26 7.3
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 26 7.3
>L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin
protein.
Length = 264
Score = 60.9 bits (141), Expect = 3e-10
Identities = 23/44 (52%), Positives = 33/44 (75%)
Frame = +3
Query: 3 PLMSLEHCIAPFLDQCDADEDHRITLAEWGKCLQLDEYELEDRC 134
P++ +E CI PFL+ CDA+ D I++ EWGKCL L E E+++RC
Sbjct: 221 PVIPMESCIKPFLEGCDANNDGNISIKEWGKCLGLKEGEIQERC 264
>AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin
(sparc) related protein1 protein.
Length = 264
Score = 60.9 bits (141), Expect = 3e-10
Identities = 23/44 (52%), Positives = 33/44 (75%)
Frame = +3
Query: 3 PLMSLEHCIAPFLDQCDADEDHRITLAEWGKCLQLDEYELEDRC 134
P++ +E CI PFL+ CDA+ D I++ EWGKCL L E E+++RC
Sbjct: 221 PVIPMESCIKPFLEGCDANNDGNISIKEWGKCLGLKEGEIQERC 264
>Z72513-1|CAA96669.1| 260|Caenorhabditis elegans Hypothetical
protein T04F3.2 protein.
Length = 260
Score = 29.5 bits (63), Expect = 0.79
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +3
Query: 12 SLEHCIAPFLDQCDADEDHRITLAEWGKCL 101
++ C CD ++D ++T EW KC+
Sbjct: 206 NVRQCSRNLFKTCDLNKDRKLTFDEWRKCI 235
>Z82083-6|CAB04974.1| 388|Caenorhabditis elegans Hypothetical
protein ZK1010.8 protein.
Length = 388
Score = 27.9 bits (59), Expect = 2.4
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -1
Query: 249 NSKSKLQSHVIKSEWRYVEPNIIVEFSKHHATSHR*IRRSGPP 121
+S+ + ++HV K Y++PN KHH SH R PP
Sbjct: 184 HSRRRRRNHVSKI---YLDPNDARRHQKHHHRSHSYSRPVAPP 223
>AF038609-2|AAK29794.1| 226|Caenorhabditis elegans Hypothetical
protein C54E4.2a protein.
Length = 226
Score = 27.1 bits (57), Expect = 4.2
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +3
Query: 18 EHCIAPFLDQC-DADEDHRITLAEWGKCLQL-DEYELEDRCDEFIDDL 155
E C+ F+D C D D I++ EW C D+ E C + D+
Sbjct: 110 EACVEEFIDMCDDMVVDGSISVDEWCDCFTFSDDLRHEPPCHKAKHDV 157
>AF038609-1|AAO61425.1| 234|Caenorhabditis elegans Hypothetical
protein C54E4.2b protein.
Length = 234
Score = 27.1 bits (57), Expect = 4.2
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +3
Query: 18 EHCIAPFLDQC-DADEDHRITLAEWGKCLQL-DEYELEDRCDEFIDDL 155
E C+ F+D C D D I++ EW C D+ E C + D+
Sbjct: 118 EACVEEFIDMCDDMVVDGSISVDEWCDCFTFSDDLRHEPPCHKAKHDV 165
>Z73906-8|CAA98120.3| 511|Caenorhabditis elegans Hypothetical
protein D2030.8 protein.
Length = 511
Score = 26.6 bits (56), Expect = 5.5
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +3
Query: 9 MSLEHCIAPFLDQCDADEDHRITLAEWGKCLQLDEYEL 122
+ L HC FL++CD + + L + + + LD+ E+
Sbjct: 328 IELLHCATEFLEKCDNGKHNNEILHQNLRAMSLDQCEI 365
>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical
protein F55H12.3 protein.
Length = 2972
Score = 26.2 bits (55), Expect = 7.3
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +3
Query: 45 QCDADEDHRITLAEWGKCLQLDE-YELEDRCDEF 143
QCD + + + GKC+ DE E D CD F
Sbjct: 890 QCDVGYKYVLLDSNVGKCVDRDECEEKSDYCDSF 923
>Z74476-4|CAA98966.1| 255|Caenorhabditis elegans Hypothetical
protein W05B10.4 protein.
Length = 255
Score = 26.2 bits (55), Expect = 7.3
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 124 RTAATNSSMTCSMVL*EFYDNIWLNIPPFTFNN 222
RT+++NSS CS+ + D+ L IP + +N
Sbjct: 21 RTSSSNSSSPCSISMHSLLDDTLLGIPTTSRSN 53
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 26.2 bits (55), Expect = 7.3
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -1
Query: 288 EQTVKIDKIFFLLNSKSKLQSHVIKSEWRYVEPNIIVEFSKH 163
E IDK+ ++N K +H++K+ RY P + + + H
Sbjct: 59 ESLTAIDKVMSIINEKPLKMAHILKTA-RY-NPRFLPKINNH 98
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,008,221
Number of Sequences: 27780
Number of extensions: 123055
Number of successful extensions: 336
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 336
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 524900642
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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