Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_L04
         (369 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    22   2.6  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    21   4.6  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   6.1  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          20   8.1  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      20   8.1  

>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 9/36 (25%), Positives = 20/36 (55%)
 Frame = -1

Query: 303 ICHRFEQTVKIDKIFFLLNSKSKLQSHVIKSEWRYV 196
           +    E+T+  D  F   ++K+K +   ++ +W+YV
Sbjct: 508 LVREIEKTID-DARFIAQHAKNKDKFESVEEDWKYV 542


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 39  LDQCDADEDHRITLAEWGKC 98
           LD    D+D  I +A++G C
Sbjct: 113 LDNVLLDQDGHIKIADFGMC 132


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 6/21 (28%), Positives = 14/21 (66%)
 Frame = +3

Query: 291 ICGKCLQIVKLFFTISHTFNF 353
           +CG  +  + L++ ++ TF+F
Sbjct: 8   LCGIAVLFLALYYYLTSTFDF 28


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 105 LDEYELEDRCDEFIDDL*HGAL 170
           LD Y  ++  +EF+  L HG L
Sbjct: 68  LDNYNDKEAVNEFMQLLKHGML 89


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 105 LDEYELEDRCDEFIDDL*HGAL 170
           LD Y  ++  +EF+  L HG L
Sbjct: 68  LDNYNDKEAVNEFMQLLKHGML 89


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,424
Number of Sequences: 438
Number of extensions: 1440
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8804355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)