Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_L01
(465 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68507-4|CAA92828.2| 414|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical p... 27 6.6
Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical p... 27 6.6
Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical p... 27 6.6
Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical p... 27 6.6
Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical pr... 27 6.6
AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor prote... 27 6.6
Z50863-3|CAA90735.1| 830|Caenorhabditis elegans Hypothetical pr... 27 8.8
>Z68507-4|CAA92828.2| 414|Caenorhabditis elegans Hypothetical
protein M18.6 protein.
Length = 414
Score = 27.5 bits (58), Expect = 5.0
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = -2
Query: 392 LCWVSSIIAETNRTPFDFAEGERELVSGFNVEYRRGGFALIF 267
+C VS++ + P F + ERE+ R GF ++F
Sbjct: 66 ICGVSAVCFPGQQLPMKFHDDEREIYERLVSSARANGFVVLF 107
>Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical
protein F45E10.1b protein.
Length = 1549
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 280 KPPLLYSTLNPDTNSLSPSAKSKGVRLVSAII 375
KPP +T + +TNS PS++S G V + I
Sbjct: 195 KPPSSSTTSSNNTNSFRPSSRSSGNNNVGSTI 226
>Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical
protein F45E10.1a protein.
Length = 1583
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 280 KPPLLYSTLNPDTNSLSPSAKSKGVRLVSAII 375
KPP +T + +TNS PS++S G V + I
Sbjct: 195 KPPSSSTTSSNNTNSFRPSSRSSGNNNVGSTI 226
>Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical
protein F45E10.1d protein.
Length = 1520
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 280 KPPLLYSTLNPDTNSLSPSAKSKGVRLVSAII 375
KPP +T + +TNS PS++S G V + I
Sbjct: 61 KPPSSSTTSSNNTNSFRPSSRSSGNNNVGSTI 92
>Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical
protein F45E10.1c protein.
Length = 1654
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 280 KPPLLYSTLNPDTNSLSPSAKSKGVRLVSAII 375
KPP +T + +TNS PS++S G V + I
Sbjct: 195 KPPSSSTTSSNNTNSFRPSSRSSGNNNVGSTI 226
>Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical
protein F45E10.1b protein.
Length = 1549
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 280 KPPLLYSTLNPDTNSLSPSAKSKGVRLVSAII 375
KPP +T + +TNS PS++S G V + I
Sbjct: 195 KPPSSSTTSSNNTNSFRPSSRSSGNNNVGSTI 226
>Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical
protein F45E10.1a protein.
Length = 1583
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 280 KPPLLYSTLNPDTNSLSPSAKSKGVRLVSAII 375
KPP +T + +TNS PS++S G V + I
Sbjct: 195 KPPSSSTTSSNNTNSFRPSSRSSGNNNVGSTI 226
>Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical
protein F45E10.1d protein.
Length = 1520
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 280 KPPLLYSTLNPDTNSLSPSAKSKGVRLVSAII 375
KPP +T + +TNS PS++S G V + I
Sbjct: 61 KPPSSSTTSSNNTNSFRPSSRSSGNNNVGSTI 92
>Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical
protein F45E10.1c protein.
Length = 1654
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 280 KPPLLYSTLNPDTNSLSPSAKSKGVRLVSAII 375
KPP +T + +TNS PS++S G V + I
Sbjct: 195 KPPSSSTTSSNNTNSFRPSSRSSGNNNVGSTI 226
>AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor protein
UNC-53 protein.
Length = 1583
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 280 KPPLLYSTLNPDTNSLSPSAKSKGVRLVSAII 375
KPP +T + +TNS PS++S G V + I
Sbjct: 195 KPPSSSTTSSNNTNSFRPSSRSSGNNNVGSTI 226
>Z50863-3|CAA90735.1| 830|Caenorhabditis elegans Hypothetical
protein C14H10.3 protein.
Length = 830
Score = 26.6 bits (56), Expect = 8.8
Identities = 11/33 (33%), Positives = 23/33 (69%)
Frame = -2
Query: 395 SLCWVSSIIAETNRTPFDFAEGERELVSGFNVE 297
++C++ SI+ ETN P D+ + +++ +S N+E
Sbjct: 611 AVCYIPSIVKETN--PEDWNDIQKQQISHLNLE 641
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,561,231
Number of Sequences: 27780
Number of extensions: 57060
Number of successful extensions: 219
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 219
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 829055604
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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