Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_K24
         (605 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF098503-1|AAC67408.1|  360|Caenorhabditis elegans Hypothetical ...    29   3.4  
Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical pr...    28   5.9  

>AF098503-1|AAC67408.1|  360|Caenorhabditis elegans Hypothetical
           protein H35N09.2 protein.
          Length = 360

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +1

Query: 82  NKYMMYEFLMF*FILHFYNFILYCRF 159
           +K M Y FL+F  ++ F  FI+YCRF
Sbjct: 306 SKTMQY-FLLFPVLISFSPFIVYCRF 330


>Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical
           protein C01B9.1b protein.
          Length = 1671

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = +1

Query: 121 ILHFYNFILYCRFFFLNETSFKLCYVNFKFKKVSLNHMQKLLSVY 255
           +LH   F ++ +F   N     +  VNFKF  +++N++  +LS +
Sbjct: 431 MLHMEFFNVFDKFVQPNSIKALVFSVNFKFHPLAINYITSVLSFF 475


>Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical
           protein C01B9.1a protein.
          Length = 1601

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = +1

Query: 121 ILHFYNFILYCRFFFLNETSFKLCYVNFKFKKVSLNHMQKLLSVY 255
           +LH   F ++ +F   N     +  VNFKF  +++N++  +LS +
Sbjct: 361 MLHMEFFNVFDKFVQPNSIKALVFSVNFKFHPLAINYITSVLSFF 405


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,581,284
Number of Sequences: 27780
Number of extensions: 184111
Number of successful extensions: 493
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 493
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)