Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_K21
         (538 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_29121| Best HMM Match : Toxin_12 (HMM E-Value=8.7)                  32   0.34 
SB_16901| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.4  
SB_30940| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.4  
SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098)                29   3.2  
SB_40800| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.6  
SB_15609| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.6  
SB_15673| Best HMM Match : Arc_PepC_II (HMM E-Value=1.4)               27   7.3  

>SB_29121| Best HMM Match : Toxin_12 (HMM E-Value=8.7)
          Length = 497

 Score = 31.9 bits (69), Expect = 0.34
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -2

Query: 258 YYFQTYSNRWIILPYYY*LSKSSRLACPSCVGTILIYF 145
           YY +T  NR ++  YY   S++  L C   + TI +Y+
Sbjct: 223 YYMRTSQNRSLVCVYYMRTSQNQSLVCVDHLRTICVYY 260



 Score = 27.1 bits (57), Expect = 9.7
 Identities = 15/59 (25%), Positives = 28/59 (47%)
 Frame = -2

Query: 354 SINKPLITITDKRTYRLK*LNRNHNSFHNITKYYFQTYSNRWIILPYYY*LSKSSRLAC 178
           S N+ L+ +   RT  +  +  + N    +  YY +T  N+ ++  YY   S++  L C
Sbjct: 242 SQNQSLVCVDHLRTICVYYMRTSQNK-SLVCVYYMRTSQNKSLVCVYYMRTSQNKSLVC 299


>SB_16901| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 909

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = -1

Query: 172 LRRYYFNLLSSLSFHIDLISILISIMHIDMYRRLKLDDVHFTYN 41
           L  Y +++  SL+  + LIS+LI  +HID   +    ++  T+N
Sbjct: 540 LIEYTYSMSMSLARDLQLISVLIHPLHIDTDTKRLQSEIRVTFN 583


>SB_30940| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 247

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
 Frame = -2

Query: 270 NITKYYFQTYSN--RWIILPYYY*LSKSSRLACPSCVGTILIYFPLYHFI 127
           NIT+Y +  +++  +W I   +Y    +  + C + + T  +YFP++ F+
Sbjct: 128 NITRYLYAMFTSGLKWSISHLFY---PNENMYCQTFLDTETVYFPIFIFL 174


>SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098)
          Length = 620

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 22/73 (30%), Positives = 34/73 (46%)
 Frame = -1

Query: 226 YFTLLLLTEQVLPTRLPFLRRYYFNLLSSLSFHIDLISILISIMHIDMYRRLKLDDVHFT 47
           +F LLL    +L  RL    R   +L   L  H+ L+  L  ++H  ++ R+ LD   F+
Sbjct: 300 HFRLLLHFRLLLHLRLLLHLRLLLHLRFLL--HLRLLLHLRLLLHFRLFTRVGLDTASFS 357

Query: 46  YNECRSYNGP*LY 8
             +  S N P  Y
Sbjct: 358 GQQVISNNSPYYY 370


>SB_40800| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 224

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = -1

Query: 91  IDMYRRLKLDDVHFTYNECRSYNGP*LY 8
           +D++RRLK+D   +T +EC + +   +Y
Sbjct: 171 VDLFRRLKIDAGKYTNSECTALDSGRIY 198


>SB_15609| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 150

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 15/43 (34%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
 Frame = -1

Query: 148 LSSLSFHIDLIS--ILISIMHIDMYRRLKLDDVHFTYNECRSY 26
           L +L+    L+S  ++I + H+D  + +K+  V+FTY++ RSY
Sbjct: 88  LEALNLGDPLVSNRLIIDVKHLD--KPMKILGVYFTYDQKRSY 128


>SB_15673| Best HMM Match : Arc_PepC_II (HMM E-Value=1.4)
          Length = 342

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
 Frame = -1

Query: 148 LSSLSFHIDLIS--ILISIMHIDMYRRLKLDDVHFTYNECRSY 26
           L +L     L+S  ++I + H+D  + +K+  V+FTY++ RSY
Sbjct: 88  LEALKLGDPLVSNRLIIDVKHLD--KPMKILGVYFTYDQKRSY 128


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,412,689
Number of Sequences: 59808
Number of extensions: 274825
Number of successful extensions: 562
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 561
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1215643300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)