Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_K21
         (538 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   4.9  
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    23   6.5  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   6.5  

>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 228 IILPYYY*LSKSSRLACPSCV 166
           +++PY   + K+ R  CP CV
Sbjct: 221 VLMPYVSTVPKNLREPCPGCV 241


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -2

Query: 387 TTKLQDPGRIPSINKPLITITDKRTYRLK*LNRN 286
           T KLQ    +P++ +PL++  +K   RL   NRN
Sbjct: 26  TQKLQ---LLPAVRRPLLSDAEKLEQRLLAPNRN 56


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 13/45 (28%), Positives = 19/45 (42%)
 Frame = -2

Query: 291  RNHNSFHNITKYYFQTYSNRWIILPYYY*LSKSSRLACPSCVGTI 157
            RNH     +T +  Q  S    +  Y   +  +S  ACP C G +
Sbjct: 922  RNHGE---VTFHLSQVLSGHGFLREYLNKMRFTSSPACPRCPGVV 963


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 512,788
Number of Sequences: 2352
Number of extensions: 10085
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49897362
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)