Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_K19
         (397 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_17601| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.3  
SB_50622| Best HMM Match : Omega-toxin (HMM E-Value=3.1)               26   9.6  
SB_56216| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   9.6  

>SB_17601| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 649

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
 Frame = -3

Query: 137 KLSTKPEPERTRRKISLRSSSLNIVNFN--KRNIELRFICKH 18
           K++ + E    RR+   R+  L I+  +  KR+++ RFICK+
Sbjct: 392 KMTERRETPAGRRQALYRTLRLRIIALSDMKRDLDNRFICKN 433


>SB_50622| Best HMM Match : Omega-toxin (HMM E-Value=3.1)
          Length = 320

 Score = 26.2 bits (55), Expect = 9.6
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -3

Query: 131 STKPEPERTRRKISLRSSSLNIVNFNKRNIELRFICKHHTR 9
           STK E E+T+ + + RSSS N     K  I  R    H +R
Sbjct: 80  STKKEGEKTKEQTNKRSSSSNHTASKKVFIMKRRFYTHRSR 120


>SB_56216| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 117

 Score = 26.2 bits (55), Expect = 9.6
 Identities = 12/52 (23%), Positives = 25/52 (48%)
 Frame = -2

Query: 240 KTAIAGPALIMPFLMLRPIFSIFLKTFHFGSGAAETVDKARTRANTKKNILE 85
           K  +  P L++P   L   F ++++ +H+ S A  + + AR        ++E
Sbjct: 32  KKIVIIPFLVLPLPFLTCAFYLYIQRYHYRSTAFLSQESARGSDEAPPTVIE 83


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,430,437
Number of Sequences: 59808
Number of extensions: 131577
Number of successful extensions: 346
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 346
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 690807992
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)