Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_K18
         (333 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    27   0.079
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   3.9  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   3.9  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   3.9  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   3.9  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           21   5.2  

>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 26.6 bits (56), Expect = 0.079
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 153 CIASCRQKGYKSGGYCTINGCQC 221
           C A+C   G K+GG+C   GC C
Sbjct: 60  CAANCLSLG-KAGGHCEKVGCIC 81


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 3.9
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -1

Query: 183 CIPFVCS*QCTRKTHISGMEDLRISC 106
           C+P + S +C      S ++ + +SC
Sbjct: 37  CVPEIYSKECDEMKKDSAVKGIPVSC 62


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 3.9
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -1

Query: 183 CIPFVCS*QCTRKTHISGMEDLRISC 106
           C+P + S +C      S ++ + +SC
Sbjct: 37  CVPEIYSKECDEMKKDSAVKGIPVSC 62


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.0 bits (42), Expect = 3.9
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 196 TAPSMDANVCDN 231
           T  SMD +VCDN
Sbjct: 568 TDQSMDIDVCDN 579


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 3.9
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -1

Query: 183 CIPFVCS*QCTRKTHISGMEDLRISC 106
           C+P + S +C      S ++ + +SC
Sbjct: 37  CVPEIYSKECDEMKKDSAVKGIPVSC 62


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 20.6 bits (41), Expect = 5.2
 Identities = 7/23 (30%), Positives = 10/23 (43%)
 Frame = +3

Query: 153 CIASCRQKGYKSGGYCTINGCQC 221
           C   C  +GYK+     +  C C
Sbjct: 113 CDLMCCGRGYKTQEVTVVERCAC 135


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,570
Number of Sequences: 438
Number of extensions: 1983
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7466580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)