Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_K17
         (552 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012)               41   8e-04
SB_7503| Best HMM Match : No HMM Matches (HMM E-Value=.)               34   0.089
SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.16 
SB_29831| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.9  
SB_37731| Best HMM Match : TPD52 (HMM E-Value=1.2)                     29   3.3  
SB_2443| Best HMM Match : GrpE (HMM E-Value=1.9)                       29   3.3  
SB_19521| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.4  
SB_1712| Best HMM Match : Peptidase_C14 (HMM E-Value=1.6e-21)          28   4.4  
SB_197| Best HMM Match : LISCH7 (HMM E-Value=1.3)                      28   5.8  
SB_43303| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.8  
SB_7268| Best HMM Match : DUF472 (HMM E-Value=0.99)                    28   5.8  
SB_24482| Best HMM Match : KID (HMM E-Value=0.045)                     27   7.7  

>SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012)
          Length = 126

 Score = 40.7 bits (91), Expect = 8e-04
 Identities = 20/53 (37%), Positives = 27/53 (50%)
 Frame = +3

Query: 216 SHVAGELQAYANLYLKRSYEYLLSASYFNNYKINRAGFSKMFRKLSDEAWEKA 374
           + + G +    N  L   Y YL  A +F+   IN  GF+K F+K S E WE A
Sbjct: 32  NQLEGPINKQINKELYAHYTYLSMAFHFDRDDINLPGFNKFFKKASKEEWEHA 84


>SB_7503| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 203

 Score = 33.9 bits (74), Expect = 0.089
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = +3

Query: 258 LKRSYEYLLSASYFNNYKINRAGFSKMFRKLSDEAWEKA 374
           ++R YE    A +F+   IN  GF+K F+K S E WE A
Sbjct: 24  MRRDYE----AFHFDRDDINLPGFNKFFKKASKEEWEHA 58


>SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 394

 Score = 33.1 bits (72), Expect = 0.16
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = +3

Query: 249 NLYLKRSYEYLLSASYFNNYKINRAGFSKMFRKLSDEAWEKA 374
           NL L  SY Y   A YF+   ++  GF K F+K + E  E A
Sbjct: 21  NLELYASYVYTSMACYFDREDVHLPGFHKFFKKQAHEEREHA 62


>SB_29831| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 171

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +3

Query: 414 MDFSRRSIYDPEPGKKYVVELHELDSLAXALDTQKELAE 530
           +DF        EP +++ +    LD LA +LDT+K  AE
Sbjct: 84  LDFKNNESKGEEPKEQHSIHESLLDDLAKSLDTKKRTAE 122


>SB_37731| Best HMM Match : TPD52 (HMM E-Value=1.2)
          Length = 499

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +3

Query: 414 MDFSRRSIYDPEPGKKYVVELHELDSLAXALDTQKELAE 530
           +DF+       EP +++ +    LD+LA +LDT++  AE
Sbjct: 84  LDFNNNESKAEEPKEQHFIHESLLDNLAKSLDTKERTAE 122


>SB_2443| Best HMM Match : GrpE (HMM E-Value=1.9)
          Length = 171

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +3

Query: 414 MDFSRRSIYDPEPGKKYVVELHELDSLAXALDTQKELAE 530
           +DF+       EP +++ +    LD LA +LDT+K  AE
Sbjct: 84  LDFNNNESKAAEPEEQHSIHELLLDDLAKSLDTKKRTAE 122


>SB_19521| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 396

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 6/41 (14%)
 Frame = +3

Query: 408 INMDFSR----RSIYDPEPGKKYVVELH--ELDSLAXALDT 512
           I ++FS+     +IYDPE  K+ VV +H  E+D +  A +T
Sbjct: 196 IKLEFSKAIHDENIYDPEDRKQQVVHIHTTEIDDMCLADNT 236


>SB_1712| Best HMM Match : Peptidase_C14 (HMM E-Value=1.6e-21)
          Length = 594

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 6/41 (14%)
 Frame = +3

Query: 408 INMDFSR----RSIYDPEPGKKYVVELH--ELDSLAXALDT 512
           I ++FS+     +IYDPE  K+ VV +H  E+D +  A +T
Sbjct: 240 IKLEFSKAIHDENIYDPEDRKQQVVHIHTTEIDDICLADNT 280


>SB_197| Best HMM Match : LISCH7 (HMM E-Value=1.3)
          Length = 120

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 14/37 (37%), Positives = 15/37 (40%)
 Frame = -2

Query: 164 CRCRHTFSCHSFVTTVTCVNARQSQETSYCECDFLHC 54
           CRC  T  C  F T   C  AR     + C C   HC
Sbjct: 35  CRCFAT-RCRCFATRCHCFAARCRCFAARCRCFAAHC 70



 Score = 27.5 bits (58), Expect = 7.7
 Identities = 13/36 (36%), Positives = 15/36 (41%)
 Frame = -2

Query: 164 CRCRHTFSCHSFVTTVTCVNARQSQETSYCECDFLH 57
           CRC  T  CH F     C  AR     ++C C   H
Sbjct: 42  CRCFAT-RCHCFAARCRCFAARCRCFAAHCRCFAAH 76


>SB_43303| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 116

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +3

Query: 414 MDFSRRSIYDPEPGKKYVVELHELDSLAXALDTQKELAE 530
           +DF+       EP +++ +    LD LA +LDT++  AE
Sbjct: 54  LDFNNNESKAEEPKEQHSIHESLLDDLAKSLDTKERTAE 92


>SB_7268| Best HMM Match : DUF472 (HMM E-Value=0.99)
          Length = 554

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +3

Query: 414 MDFSRRSIYDPEPGKKYVVELHELDSLAXALDTQKELAE 530
           +DF+       EP +++ +    LD LA +LDT++  AE
Sbjct: 84  LDFNNNESKAEEPKEQHSIHESLLDDLAKSLDTKERTAE 122


>SB_24482| Best HMM Match : KID (HMM E-Value=0.045)
          Length = 1714

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +3

Query: 408  INMDFSRRSIYDPEPGKKYVVELHELDSLAXALDTQKELAETR 536
            + M F+ R I +    K++ V    +D+L   L+ +KEL ET+
Sbjct: 1246 LKMKFTDRDIANLASEKEFEVISETVDNLRALLEEKKELLETK 1288


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,278,339
Number of Sequences: 59808
Number of extensions: 312807
Number of successful extensions: 860
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 860
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1276425465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)