Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_K17
(552 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106592-2|AAK21364.1| 170|Caenorhabditis elegans Ferritin prot... 40 0.002
AF016447-16|AAG24016.1| 170|Caenorhabditis elegans Ferritin pro... 35 0.045
U53149-1|AAD31546.1| 328|Caenorhabditis elegans Prion-like-(q/n... 34 0.059
Z75955-8|CAB00122.1| 410|Caenorhabditis elegans Hypothetical pr... 31 0.73
Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr... 27 6.8
U21308-9|AAW57822.1| 787|Caenorhabditis elegans Nfi (nuclear fa... 27 6.8
U21308-8|AAN60509.2| 807|Caenorhabditis elegans Nfi (nuclear fa... 27 6.8
U21308-7|AAW57823.1| 823|Caenorhabditis elegans Nfi (nuclear fa... 27 6.8
AL034364-1|CAA22251.1| 272|Caenorhabditis elegans Hypothetical ... 27 6.8
>AF106592-2|AAK21364.1| 170|Caenorhabditis elegans Ferritin protein
2 protein.
Length = 170
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = +3
Query: 207 NDYSHVAGELQAYANLYLKRSYEYLLSASYFNNYKINRAGFSKMFRKLSDEAWEKAIDLI 386
N +S V + N+ L SY YL + YF+ + +K F++ SDE E A +L+
Sbjct: 7 NYHSEVEAAVNKQINIELYASYVYLSMSFYFDRDDVALPNIAKFFKEQSDEEREHATELM 66
Query: 387 KHVTMRG 407
+ +RG
Sbjct: 67 RVQNLRG 73
>AF016447-16|AAG24016.1| 170|Caenorhabditis elegans Ferritin
protein 1 protein.
Length = 170
Score = 34.7 bits (76), Expect = 0.045
Identities = 29/112 (25%), Positives = 51/112 (45%)
Frame = +3
Query: 207 NDYSHVAGELQAYANLYLKRSYEYLLSASYFNNYKINRAGFSKMFRKLSDEAWEKAIDLI 386
N + V + N+ L SY YL +++F+ I +K F++ SDE A +L+
Sbjct: 7 NYHDEVEAAVNKQINVELYASYVYLSMSAHFDRDDIALRNIAKFFKEQSDEERGHATELM 66
Query: 387 KHVTMRGINMDFSRRSIYDPEPGKKYVVELHELDSLAXALDTQKELAETRLH 542
+ +RG + + ++I PE + V E A AL+ + +LH
Sbjct: 67 RIQAVRGGRV--AMQNIQKPEKDEWGTV--LEAFEAALALERANNASLLKLH 114
>U53149-1|AAD31546.1| 328|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 16
protein.
Length = 328
Score = 34.3 bits (75), Expect = 0.059
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Frame = -2
Query: 176 QRQSCRC---RHTFSCHSFVT--TVTCVNARQSQETSYCECDFLHCSKAI 42
+RQ+C+C + + SC+S + T TC N +QS S C C SK++
Sbjct: 25 KRQNCKCSPPQSSCSCNSAIQSQTCTCHNTQQSTSASNCNCVLKSNSKSV 74
>Z75955-8|CAB00122.1| 410|Caenorhabditis elegans Hypothetical
protein R07B7.13 protein.
Length = 410
Score = 30.7 bits (66), Expect = 0.73
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +3
Query: 249 NLYLKRSYEYLLSASYFNNYKINRAGFSKMFRKLSDEAWEKAIDLIKHVTMRGINMDFSR 428
NL L R+ A Y +N + ++KM + E AI L+KH ++ FSR
Sbjct: 200 NLKLIRNQMNAELAGYAHNGSLAMVEYAKMLDFFPKISKETAIKLVKHGLFMCGSLSFSR 259
Query: 429 RSI 437
RSI
Sbjct: 260 RSI 262
>Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical protein
T01H10.8 protein.
Length = 2692
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/77 (20%), Positives = 37/77 (48%)
Frame = +3
Query: 267 SYEYLLSASYFNNYKINRAGFSKMFRKLSDEAWEKAIDLIKHVTMRGINMDFSRRSIYDP 446
++EYL + F I+ + S +F ++ + +K++DL R ++ + +
Sbjct: 2029 NFEYLTMLNLFAGRTIHDSSSSPIFPRILAKFGDKSVDLQDKTIYRKLDRPVAAQDPVSV 2088
Query: 447 EPGKKYVVELHELDSLA 497
E K++ EL E + ++
Sbjct: 2089 EKHKEHYNELKENEEIS 2105
>Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical protein
T01H10.8 protein.
Length = 2692
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/77 (20%), Positives = 37/77 (48%)
Frame = +3
Query: 267 SYEYLLSASYFNNYKINRAGFSKMFRKLSDEAWEKAIDLIKHVTMRGINMDFSRRSIYDP 446
++EYL + F I+ + S +F ++ + +K++DL R ++ + +
Sbjct: 2029 NFEYLTMLNLFAGRTIHDSSSSPIFPRILAKFGDKSVDLQDKTIYRKLDRPVAAQDPVSV 2088
Query: 447 EPGKKYVVELHELDSLA 497
E K++ EL E + ++
Sbjct: 2089 EKHKEHYNELKENEEIS 2105
>U21308-9|AAW57822.1| 787|Caenorhabditis elegans Nfi (nuclear
factor i) family protein1, isoform b protein.
Length = 787
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 240 AYANLYLKRSYEYLLSASYFNNYKINRAGFSKMFRKLSDE 359
A +NL + S Y+ S + F + + FSK+F+K+ ++
Sbjct: 526 AVSNLISRESSGYMASPTKFTTARGDTTSFSKIFQKIEEK 565
>U21308-8|AAN60509.2| 807|Caenorhabditis elegans Nfi (nuclear
factor i) family protein1, isoform a protein.
Length = 807
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 240 AYANLYLKRSYEYLLSASYFNNYKINRAGFSKMFRKLSDE 359
A +NL + S Y+ S + F + + FSK+F+K+ ++
Sbjct: 546 AVSNLISRESSGYMASPTKFTTARGDTTSFSKIFQKIEEK 585
>U21308-7|AAW57823.1| 823|Caenorhabditis elegans Nfi (nuclear
factor i) family protein1, isoform c protein.
Length = 823
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 240 AYANLYLKRSYEYLLSASYFNNYKINRAGFSKMFRKLSDE 359
A +NL + S Y+ S + F + + FSK+F+K+ ++
Sbjct: 562 AVSNLISRESSGYMASPTKFTTARGDTTSFSKIFQKIEEK 601
>AL034364-1|CAA22251.1| 272|Caenorhabditis elegans Hypothetical
protein W06D4.3 protein.
Length = 272
Score = 27.5 bits (58), Expect = 6.8
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = -1
Query: 288 QIADIRMTA*GRGWRRPEVRQRRGCSHCIRRIARYTCPETKLSL*THI 145
+I D A G+ ++ Q+R SHCI+++ YT E+ + L H+
Sbjct: 120 KILDAYSIACGKIGQKERQLQKRTRSHCIKKMRMYTADES-VELNNHV 166
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,861,698
Number of Sequences: 27780
Number of extensions: 225966
Number of successful extensions: 651
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 650
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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