Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_K17
         (552 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g40300.1 68415.m04964 ferritin, putative similar to ferritin ...    31   0.51 
At5g44630.1 68418.m05468 terpene synthase/cyclase family protein       30   1.2  
At1g05570.1 68414.m00575 callose synthase 1 (CALS1) / 1,3-beta-g...    29   2.1  
At1g29740.1 68414.m03636 leucine-rich repeat family protein / pr...    29   2.7  
At5g17220.1 68418.m02018 glutathione S-transferase, putative           28   3.6  
At1g01190.1 68414.m00032 cytochrome P450, putative similar to cy...    28   4.8  
At3g56090.1 68416.m06234 ferritin, putative similar to ferritin ...    27   8.3  

>At2g40300.1 68415.m04964 ferritin, putative similar to ferritin
           subunit cowpea2 precursor [Vigna unguiculata]
           GI:2970654; contains Pfam profile PF00210: Ferritin-like
           domain
          Length = 259

 Score = 31.1 bits (67), Expect = 0.51
 Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
 Frame = +3

Query: 201 EYNDYSHVAGELQAYANLYLKRSYEYLLSASYFNNYKINRAGFSKMFRKLSDEAWEKAID 380
           +Y+D    A  +    N+    SY Y    +YF+   I   G +K F++ S E  E A  
Sbjct: 92  KYSDECEAA--INEQINVEYNVSYVYHAMYAYFDRDNIALKGLAKFFKESSLEEREHAEK 149

Query: 381 LIKHVTMRGINMDFSRRSIYDPEPGKKYVVELHELDSLAXALDTQKELAETRLH-HS 548
           L+++   RG  +    +SI  P    ++V +   L  +  AL  +K + E  L+ HS
Sbjct: 150 LMEYQNKRGGRVKL--QSIVMPLSEFEHVDKGDALYGMELALSLEKLVNEKLLNLHS 204


>At5g44630.1 68418.m05468 terpene synthase/cyclase family protein 
          Length = 557

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
 Frame = +3

Query: 291 SYFNNYKINRAGFSKMFRKLSD-----EAWEKAIDLIKHVTMRGINMDFSRRSIYDPEPG 455
           SY N  K+  + +   F K S      +  E+ I+++K      I +  S     D +  
Sbjct: 11  SYTNFTKLPSSQWGDQFLKFSIADSDFDVLEREIEVLKPKVRENIFVSSST----DKDAM 66

Query: 456 KKYVVELHELDSLAXALDTQKELAETRLH 542
           KK ++ +H LDSL  +   +KE+ E+  H
Sbjct: 67  KKTILSIHFLDSLGLSYHFEKEIEESLKH 95


>At1g05570.1 68414.m00575 callose synthase 1 (CALS1) / 1,3-beta-glucan
            synthase 1 nearly identical to callose synthase 1
            catalytic subunit [Arabidopsis thaliana] GI:13649388
          Length = 1922

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +3

Query: 297  FNNYKINRAGFSKMFRKLSDEAWEKAIDLIKHVTMRGINMD 419
            +N +  NR G      K  +  WEK ++ ++H  +RGI ++
Sbjct: 1692 WNKWIYNRGGIGVPPEKSWESWWEKELEHLRHSGVRGITLE 1732


>At1g29740.1 68414.m03636 leucine-rich repeat family protein /
           protein kinase family protein contains Pfam domains
           PF00560: Leucine Rich Repeat and PF00069: Protein kinase
           domain
          Length = 1049

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 12/41 (29%), Positives = 23/41 (56%)
 Frame = +2

Query: 155 YNDNFVSGQV*RAIRRIQ*LQPRRWRTSGLRQPLPQAVIRI 277
           ++DN ++G +   I  +  LQ      SGL+ P+P ++ R+
Sbjct: 225 FSDNRLNGSIPEFIGNLSKLQRLELYASGLKDPIPYSIFRL 265


>At5g17220.1 68418.m02018 glutathione S-transferase, putative
          Length = 214

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = +3

Query: 222 VAGELQAYANLYLKRSYEYLLSASYFNNYKINRAGFSKMFRKLSDE-AWEKAIDLIKH 392
           +AGE    A+L    +  YL+S +  N     R  F++ + ++SD  +W+K + L  H
Sbjct: 157 LAGEEFTMADLTHMPAMGYLMSITDINQMVKARGSFNRWWEEISDRPSWKKLMVLAGH 214


>At1g01190.1 68414.m00032 cytochrome P450, putative similar to
           cytochrome P450 SP:O48927 from [Glycine max]
          Length = 535

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = -3

Query: 481 SWSSTTYFLPGSGS*MLRLEKSMLIPLIVTCLIKSIAFSQASSDNFLNILL 329
           +W+    +L G     +R   S L+P +   L + I   +A++ NFL++LL
Sbjct: 259 NWTDHLPWLAGLDFQQIRFRCSQLVPKVNLLLSRIIHEQRAATGNFLDMLL 309


>At3g56090.1 68416.m06234 ferritin, putative similar to ferritin
           subunit cowpea2 precursor [Vigna unguiculata]
           GI:2970654; contains Pfam profile PF00210: Ferritin-like
           domain
          Length = 259

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = +3

Query: 249 NLYLKRSYEYLLSASYFNNYKINRAGFSKMFRKLSDEAWEKAIDLIKHVTMRG 407
           N+    SY Y    +YF+   +   G +K F++ S E  E A  L+++   RG
Sbjct: 104 NVEYNVSYVYHALYAYFDRDNVALKGLAKFFKESSVEEREHAELLMEYQNKRG 156


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,092,382
Number of Sequences: 28952
Number of extensions: 207947
Number of successful extensions: 510
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 510
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1043173136
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)