Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_K16
(575 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X73460-1|CAA51839.1| 403|Homo sapiens ribosomal protein L3 prot... 46 1e-04
CR456566-1|CAG30452.1| 403|Homo sapiens RPL3 protein. 46 1e-04
BC107711-1|AAI07712.1| 403|Homo sapiens ribosomal protein L3 pr... 46 1e-04
BC088373-1|AAH88373.1| 403|Homo sapiens ribosomal protein L3 pr... 46 1e-04
BC063662-1|AAH63662.1| 403|Homo sapiens ribosomal protein L3 pr... 46 1e-04
BC015767-1|AAH15767.1| 403|Homo sapiens ribosomal protein L3 pr... 46 1e-04
BC015032-1|AAH15032.1| 403|Homo sapiens ribosomal protein L3, i... 46 1e-04
BC014017-1|AAH14017.1| 403|Homo sapiens ribosomal protein L3 pr... 46 1e-04
BC013674-1|AAH13674.1| 403|Homo sapiens ribosomal protein L3 pr... 46 1e-04
BC012786-1|AAH12786.1| 403|Homo sapiens ribosomal protein L3 pr... 46 1e-04
BC012146-1|AAH12146.1| 403|Homo sapiens ribosomal protein L3 pr... 46 1e-04
BC008492-1|AAH08492.1| 403|Homo sapiens ribosomal protein L3 pr... 46 1e-04
BC008003-1|AAH08003.1| 403|Homo sapiens ribosomal protein L3 pr... 46 1e-04
BC006483-1|AAH06483.1| 403|Homo sapiens ribosomal protein L3, i... 46 1e-04
BC002408-1|AAH02408.1| 403|Homo sapiens ribosomal protein L3 pr... 46 1e-04
AL022326-1|CAA18450.1| 403|Homo sapiens ribosomal protein L3 pr... 46 1e-04
AB062291-1|BAB93474.1| 403|Homo sapiens ribosomal protein L3 pr... 46 1e-04
L22453-1|AAA91344.1| 277|Homo sapiens TARBP-b protein. 44 3e-04
U65581-1|AAC50777.1| 407|Homo sapiens ribosomal protein L3-like... 43 9e-04
BC050413-1|AAH50413.1| 407|Homo sapiens ribosomal protein L3-li... 43 9e-04
AE006640-5|AAK61301.1| 406|Homo sapiens 60S ribosomal protein L... 43 9e-04
M90054-1|AAA60291.1| 398|Homo sapiens ribosomal protein L3 prot... 38 0.025
AB058756-1|BAB47482.1| 708|Homo sapiens KIAA1853 protein protein. 31 3.8
BC093660-1|AAH93660.1| 931|Homo sapiens transient receptor pote... 30 6.7
BC093658-1|AAH93658.1| 931|Homo sapiens transient receptor pote... 30 6.7
AJ271068-1|CAC01686.1| 876|Homo sapiens transient receptor pote... 30 6.7
AJ271067-1|CAC01685.1| 815|Homo sapiens transient receptor pote... 30 6.7
AJ271066-1|CAC01684.1| 931|Homo sapiens transient receptor pote... 30 6.7
AJ006276-1|CAA06943.1| 931|Homo sapiens transient receptor pote... 30 6.7
AF080394-1|AAC63289.2| 931|Homo sapiens transient receptor pote... 30 6.7
>X73460-1|CAA51839.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 45.6 bits (103), Expect = 1e-04
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +1
Query: 505 AHRKFSAPRHGSMGFYPKKRSRR 573
+HRKFSAPRHGS+GF P+KRS R
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSR 24
>CR456566-1|CAG30452.1| 403|Homo sapiens RPL3 protein.
Length = 403
Score = 45.6 bits (103), Expect = 1e-04
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +1
Query: 505 AHRKFSAPRHGSMGFYPKKRSRR 573
+HRKFSAPRHGS+GF P+KRS R
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSR 24
>BC107711-1|AAI07712.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 45.6 bits (103), Expect = 1e-04
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +1
Query: 505 AHRKFSAPRHGSMGFYPKKRSRR 573
+HRKFSAPRHGS+GF P+KRS R
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSR 24
>BC088373-1|AAH88373.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 45.6 bits (103), Expect = 1e-04
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +1
Query: 505 AHRKFSAPRHGSMGFYPKKRSRR 573
+HRKFSAPRHGS+GF P+KRS R
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSR 24
>BC063662-1|AAH63662.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 45.6 bits (103), Expect = 1e-04
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +1
Query: 505 AHRKFSAPRHGSMGFYPKKRSRR 573
+HRKFSAPRHGS+GF P+KRS R
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSR 24
>BC015767-1|AAH15767.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 45.6 bits (103), Expect = 1e-04
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +1
Query: 505 AHRKFSAPRHGSMGFYPKKRSRR 573
+HRKFSAPRHGS+GF P+KRS R
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSR 24
>BC015032-1|AAH15032.1| 403|Homo sapiens ribosomal protein L3,
isoform a protein.
Length = 403
Score = 45.6 bits (103), Expect = 1e-04
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +1
Query: 505 AHRKFSAPRHGSMGFYPKKRSRR 573
+HRKFSAPRHGS+GF P+KRS R
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSR 24
>BC014017-1|AAH14017.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 45.6 bits (103), Expect = 1e-04
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +1
Query: 505 AHRKFSAPRHGSMGFYPKKRSRR 573
+HRKFSAPRHGS+GF P+KRS R
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSR 24
>BC013674-1|AAH13674.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 45.6 bits (103), Expect = 1e-04
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +1
Query: 505 AHRKFSAPRHGSMGFYPKKRSRR 573
+HRKFSAPRHGS+GF P+KRS R
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSR 24
>BC012786-1|AAH12786.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 45.6 bits (103), Expect = 1e-04
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +1
Query: 505 AHRKFSAPRHGSMGFYPKKRSRR 573
+HRKFSAPRHGS+GF P+KRS R
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSR 24
>BC012146-1|AAH12146.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 45.6 bits (103), Expect = 1e-04
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +1
Query: 505 AHRKFSAPRHGSMGFYPKKRSRR 573
+HRKFSAPRHGS+GF P+KRS R
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSR 24
>BC008492-1|AAH08492.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 45.6 bits (103), Expect = 1e-04
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +1
Query: 505 AHRKFSAPRHGSMGFYPKKRSRR 573
+HRKFSAPRHGS+GF P+KRS R
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSR 24
>BC008003-1|AAH08003.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 45.6 bits (103), Expect = 1e-04
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +1
Query: 505 AHRKFSAPRHGSMGFYPKKRSRR 573
+HRKFSAPRHGS+GF P+KRS R
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSR 24
>BC006483-1|AAH06483.1| 403|Homo sapiens ribosomal protein L3,
isoform a protein.
Length = 403
Score = 45.6 bits (103), Expect = 1e-04
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +1
Query: 505 AHRKFSAPRHGSMGFYPKKRSRR 573
+HRKFSAPRHGS+GF P+KRS R
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSR 24
>BC002408-1|AAH02408.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 45.6 bits (103), Expect = 1e-04
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +1
Query: 505 AHRKFSAPRHGSMGFYPKKRSRR 573
+HRKFSAPRHGS+GF P+KRS R
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSR 24
>AL022326-1|CAA18450.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 45.6 bits (103), Expect = 1e-04
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +1
Query: 505 AHRKFSAPRHGSMGFYPKKRSRR 573
+HRKFSAPRHGS+GF P+KRS R
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSR 24
>AB062291-1|BAB93474.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 45.6 bits (103), Expect = 1e-04
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +1
Query: 505 AHRKFSAPRHGSMGFYPKKRSRR 573
+HRKFSAPRHGS+GF P+KRS R
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSR 24
>L22453-1|AAA91344.1| 277|Homo sapiens TARBP-b protein.
Length = 277
Score = 44.4 bits (100), Expect = 3e-04
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = +1
Query: 505 AHRKFSAPRHGSMGFYPKKRSRR 573
+HRKFSAPRHGS+GF P+KR+ R
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRTSR 24
>U65581-1|AAC50777.1| 407|Homo sapiens ribosomal protein L3-like
protein.
Length = 407
Score = 42.7 bits (96), Expect = 9e-04
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +1
Query: 505 AHRKFSAPRHGSMGFYPKKRSRR 573
+HRKFSAPRHG +GF P KRS R
Sbjct: 2 SHRKFSAPRHGHLGFLPHKRSHR 24
>BC050413-1|AAH50413.1| 407|Homo sapiens ribosomal protein L3-like
protein.
Length = 407
Score = 42.7 bits (96), Expect = 9e-04
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +1
Query: 505 AHRKFSAPRHGSMGFYPKKRSRR 573
+HRKFSAPRHG +GF P KRS R
Sbjct: 2 SHRKFSAPRHGHLGFLPHKRSHR 24
>AE006640-5|AAK61301.1| 406|Homo sapiens 60S ribosomal protein L3
like protein.
Length = 406
Score = 42.7 bits (96), Expect = 9e-04
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +1
Query: 505 AHRKFSAPRHGSMGFYPKKRSRR 573
+HRKFSAPRHG +GF P KRS R
Sbjct: 1 SHRKFSAPRHGHLGFLPHKRSHR 23
>M90054-1|AAA60291.1| 398|Homo sapiens ribosomal protein L3
protein.
Length = 398
Score = 37.9 bits (84), Expect = 0.025
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +1
Query: 517 FSAPRHGSMGFYPKKRSRR 573
FSAPRHGS+GF P+KRS R
Sbjct: 1 FSAPRHGSLGFLPRKRSSR 19
>AB058756-1|BAB47482.1| 708|Homo sapiens KIAA1853 protein protein.
Length = 708
Score = 30.7 bits (66), Expect = 3.8
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = -1
Query: 224 PESSHYD*RHRCERRSQMHQSCP*TCSPLRHR 129
P SH HRC RSQ +S P +C RHR
Sbjct: 274 PRKSHRHRHHRCPSRSQSSESRPSSCES-RHR 304
>BC093660-1|AAH93660.1| 931|Homo sapiens transient receptor potential
cation channel, subfamily C, member 6 protein.
Length = 931
Score = 29.9 bits (64), Expect = 6.7
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Frame = -3
Query: 354 KYLENEKL-VLGSHEDL------MKGVSNFFQPALKSSDVVGVLKRFSFPPRE*SLRLKT 196
K E +KL +LGSHEDL K V + QP+++SS+ L F+ PPR+ +K
Sbjct: 803 KINEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQYQKIMKR 861
Query: 195 SV*AAVADAPI 163
+ V A I
Sbjct: 862 LIKRYVLQAQI 872
>BC093658-1|AAH93658.1| 931|Homo sapiens transient receptor potential
cation channel, subfamily C, member 6 protein.
Length = 931
Score = 29.9 bits (64), Expect = 6.7
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Frame = -3
Query: 354 KYLENEKL-VLGSHEDL------MKGVSNFFQPALKSSDVVGVLKRFSFPPRE*SLRLKT 196
K E +KL +LGSHEDL K V + QP+++SS+ L F+ PPR+ +K
Sbjct: 803 KINEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQYQKIMKR 861
Query: 195 SV*AAVADAPI 163
+ V A I
Sbjct: 862 LIKRYVLQAQI 872
>AJ271068-1|CAC01686.1| 876|Homo sapiens transient receptor
potential channel 6, variant delta377-431 protein.
Length = 876
Score = 29.9 bits (64), Expect = 6.7
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Frame = -3
Query: 354 KYLENEKL-VLGSHEDL------MKGVSNFFQPALKSSDVVGVLKRFSFPPRE*SLRLKT 196
K E +KL +LGSHEDL K V + QP+++SS+ L F+ PPR+ +K
Sbjct: 748 KINEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQYQKIMKR 806
Query: 195 SV*AAVADAPI 163
+ V A I
Sbjct: 807 LIKRYVLQAQI 817
>AJ271067-1|CAC01685.1| 815|Homo sapiens transient receptor
potential channel 6, variant delta316-431 protein.
Length = 815
Score = 29.9 bits (64), Expect = 6.7
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Frame = -3
Query: 354 KYLENEKL-VLGSHEDL------MKGVSNFFQPALKSSDVVGVLKRFSFPPRE*SLRLKT 196
K E +KL +LGSHEDL K V + QP+++SS+ L F+ PPR+ +K
Sbjct: 687 KINEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQYQKIMKR 745
Query: 195 SV*AAVADAPI 163
+ V A I
Sbjct: 746 LIKRYVLQAQI 756
>AJ271066-1|CAC01684.1| 931|Homo sapiens transient receptor potential
channel 6 protein.
Length = 931
Score = 29.9 bits (64), Expect = 6.7
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Frame = -3
Query: 354 KYLENEKL-VLGSHEDL------MKGVSNFFQPALKSSDVVGVLKRFSFPPRE*SLRLKT 196
K E +KL +LGSHEDL K V + QP+++SS+ L F+ PPR+ +K
Sbjct: 803 KINEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQYQKIMKR 861
Query: 195 SV*AAVADAPI 163
+ V A I
Sbjct: 862 LIKRYVLQAQI 872
>AJ006276-1|CAA06943.1| 931|Homo sapiens transient receptor potential
protein protein.
Length = 931
Score = 29.9 bits (64), Expect = 6.7
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Frame = -3
Query: 354 KYLENEKL-VLGSHEDL------MKGVSNFFQPALKSSDVVGVLKRFSFPPRE*SLRLKT 196
K E +KL +LGSHEDL K V + QP+++SS+ L F+ PPR+ +K
Sbjct: 803 KINEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQYQKIMKR 861
Query: 195 SV*AAVADAPI 163
+ V A I
Sbjct: 862 LIKRYVLQAQI 872
>AF080394-1|AAC63289.2| 931|Homo sapiens transient receptor potential
protein 6 protein.
Length = 931
Score = 29.9 bits (64), Expect = 6.7
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Frame = -3
Query: 354 KYLENEKL-VLGSHEDL------MKGVSNFFQPALKSSDVVGVLKRFSFPPRE*SLRLKT 196
K E +KL +LGSHEDL K V + QP+++SS+ L F+ PPR+ +K
Sbjct: 803 KINEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQYQKIMKR 861
Query: 195 SV*AAVADAPI 163
+ V A I
Sbjct: 862 LIKRYVLQAQI 872
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,044,206
Number of Sequences: 237096
Number of extensions: 1653704
Number of successful extensions: 3022
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 2923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3022
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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