Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_K16
(575 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 46 2e-05
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 46 2e-05
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 46 2e-05
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 46 2e-05
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 46 2e-05
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AF039719-12|AAB96758.1| 293|Caenorhabditis elegans Hypothetical... 28 5.5
Z99288-10|CAB16552.2| 338|Caenorhabditis elegans Hypothetical p... 27 9.5
Z82267-3|CAB05191.1| 186|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z81483-7|CAB03964.2| 338|Caenorhabditis elegans Hypothetical pr... 27 9.5
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 46.0 bits (104), Expect = 2e-05
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +1
Query: 505 AHRKFSAPRHGSMGFYPKKRSR 570
+HRKFSAPRHG MGF PKKRSR
Sbjct: 2 SHRKFSAPRHGHMGFTPKKRSR 23
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 46.0 bits (104), Expect = 2e-05
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +1
Query: 505 AHRKFSAPRHGSMGFYPKKRSR 570
+HRKFSAPRHG MGF PKKRSR
Sbjct: 2 SHRKFSAPRHGHMGFTPKKRSR 23
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 46.0 bits (104), Expect = 2e-05
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +1
Query: 505 AHRKFSAPRHGSMGFYPKKRSR 570
+HRKFSAPRHG MGF PKKRSR
Sbjct: 2 SHRKFSAPRHGHMGFTPKKRSR 23
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 46.0 bits (104), Expect = 2e-05
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +1
Query: 505 AHRKFSAPRHGSMGFYPKKRSR 570
+HRKFSAPRHG MGF PKKRSR
Sbjct: 2 SHRKFSAPRHGHMGFTPKKRSR 23
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 46.0 bits (104), Expect = 2e-05
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +1
Query: 505 AHRKFSAPRHGSMGFYPKKRSR 570
+HRKFSAPRHG MGF PKKRSR
Sbjct: 2 SHRKFSAPRHGHMGFTPKKRSR 23
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 46.0 bits (104), Expect = 2e-05
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +1
Query: 505 AHRKFSAPRHGSMGFYPKKRSR 570
+HRKFSAPRHG MGF PKKRSR
Sbjct: 2 SHRKFSAPRHGHMGFTPKKRSR 23
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 46.0 bits (104), Expect = 2e-05
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +1
Query: 505 AHRKFSAPRHGSMGFYPKKRSR 570
+HRKFSAPRHG MGF PKKRSR
Sbjct: 2 SHRKFSAPRHGHMGFTPKKRSR 23
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 46.0 bits (104), Expect = 2e-05
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +1
Query: 505 AHRKFSAPRHGSMGFYPKKRSR 570
+HRKFSAPRHG MGF PKKRSR
Sbjct: 2 SHRKFSAPRHGHMGFTPKKRSR 23
>AF039719-12|AAB96758.1| 293|Caenorhabditis elegans Hypothetical
protein K04F10.7 protein.
Length = 293
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +1
Query: 64 QCQSIRH*KPAKYSSSSELQHCRCRSGLHVQGQDWC 171
QCQ + AKY Q+C+ + H Q WC
Sbjct: 25 QCQKCQK-NEAKYGKPGTCQYCKLNAAFHDQKCVWC 59
>Z99288-10|CAB16552.2| 338|Caenorhabditis elegans Hypothetical
protein ZK262.11 protein.
Length = 338
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -3
Query: 123 LKFGT*GIFGRFLVANALALK-SWLSLWKRFTLP 25
L+F T GI G F + K SW+ LWK+F P
Sbjct: 108 LQFVTLGITGIFENRFRIICKFSWVPLWKKFITP 141
>Z82267-3|CAB05191.1| 186|Caenorhabditis elegans Hypothetical
protein F38C2.5 protein.
Length = 186
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 95 PNIPQVPNFNTVGAGVDYMFKDKIGASATAAHTD 196
P +PQ ++ +G+ F D GASA+++ TD
Sbjct: 151 PLMPQFSSWFAPSSGLSREFLDNFGASASSSSTD 184
>Z81483-7|CAB03964.2| 338|Caenorhabditis elegans Hypothetical
protein C43D7.6 protein.
Length = 338
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -3
Query: 123 LKFGT*GIFGRFLVANALALK-SWLSLWKRFTLP 25
L+F T GI G F + K SW+ LWK+F P
Sbjct: 108 LQFVTLGITGIFENRFRIICKFSWVPLWKKFITP 141
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,337,790
Number of Sequences: 27780
Number of extensions: 272752
Number of successful extensions: 659
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 659
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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