Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_K15
         (482 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    24   0.64 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   4.5  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   7.9  

>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 24.2 bits (50), Expect = 0.64
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 83  ATMGRHHSHVQAPPPPPATLSCLVA 9
           A+   HH H+QA PP  +     VA
Sbjct: 49  ASSQHHHHHLQARPPQDSPYDASVA 73


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 12/59 (20%), Positives = 21/59 (35%)
 Frame = -1

Query: 233  PETGPNTIAFPITTNPKXXXXXXXXXXXXXCTGRTDATPSPTSSAVATNSATMGRHHSH 57
            P   P+T ++   T P               T  T   P+ T S +  +    G+++ H
Sbjct: 1157 PGHKPSTSSWQKPTKPSYRPPSTTNHWQTKTTTSTTTRPTTTVSQLIDDKCDSGQYYPH 1215



 Score = 21.0 bits (42), Expect = 6.0
 Identities = 10/34 (29%), Positives = 13/34 (38%)
 Frame = -1

Query: 140  TGRTDATPSPTSSAVATNSATMGRHHSHVQAPPP 39
            T R   T  PT+++  T   T          PPP
Sbjct: 1056 TTRRTTTTRPTTTSTTTRPTTTNWPTQGTTIPPP 1089


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 9/39 (23%), Positives = 16/39 (41%)
 Frame = -3

Query: 456 HPGERGLDSGRSNRRDARPRHRTPGEGGGRYRSQQRPEP 340
           H  E+  +  +   R  R  H    + GG   +++ P P
Sbjct: 241 HTNEKPFECDKCRGRFRRRHHLVHHKCGGEEEAERAPAP 279


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,382
Number of Sequences: 336
Number of extensions: 1619
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11352204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)