Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_K15
         (482 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_8680| Best HMM Match : No HMM Matches (HMM E-Value=.)               31   0.66 
SB_8335| Best HMM Match : Dehydrin (HMM E-Value=7.2)                   30   1.1  
SB_22765| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.5  
SB_47342| Best HMM Match : VWA (HMM E-Value=0)                         29   2.0  
SB_51044| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.7  
SB_37962| Best HMM Match : Tcp10_C (HMM E-Value=5.9e-36)               29   2.7  
SB_59632| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   3.5  
SB_23539| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   3.5  
SB_22789| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   3.5  
SB_19340| Best HMM Match : EGF_CA (HMM E-Value=3.8e-27)                28   3.5  
SB_53103| Best HMM Match : DUF1388 (HMM E-Value=0.29)                  28   4.6  
SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)           28   4.6  
SB_52455| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.6  
SB_38952| Best HMM Match : 7tm_2 (HMM E-Value=1.7e-21)                 28   4.6  
SB_35959| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.6  
SB_57969| Best HMM Match : zf-CCHC (HMM E-Value=0.0097)                27   6.1  
SB_41562| Best HMM Match : DUF131 (HMM E-Value=2.7)                    27   6.1  
SB_36935| Best HMM Match : Somatomedin_B (HMM E-Value=1.8e-06)         27   6.1  
SB_22220| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.1  
SB_4600| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   6.1  
SB_52550| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.1  

>SB_8680| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2462

 Score = 30.7 bits (66), Expect = 0.66
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = -1

Query: 128  DATPSPTSSAVATNSATMGRHHSHVQAPPPPP 33
            DA  SP S++  T S + G H   V  PPPPP
Sbjct: 2298 DANSSPGSNS--TRSPSTGSHSPSVPPPPPPP 2327


>SB_8335| Best HMM Match : Dehydrin (HMM E-Value=7.2)
          Length = 531

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = -3

Query: 444 RGLDSGRS-NRRDARPRHRTPGEGGGRYRSQQRPEPKQCACRLRHYVPERCEDRQPAQRD 268
           R  D  RS + RD RPR+R+P     +  ++ R + ++ A R R   P    D +   RD
Sbjct: 254 RDRDPERSRDYRDGRPRNRSPERQRDQRDARPRDQREREADRSRDGRPRESRDAE-RPRD 312

Query: 267 CR 262
           CR
Sbjct: 313 CR 314


>SB_22765| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1387

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 21/87 (24%), Positives = 32/87 (36%)
 Frame = -3

Query: 366  YRSQQRPEPKQCACRLRHYVPERCEDRQPAQRDCRQCHRGVHVRTRDGAEHDRVSDHHXX 187
            Y+   RP P+ CA R     P++C   Q A +  ++    +    + G+ +  VS     
Sbjct: 837  YKISHRPCPEACAKRCTDDCPDKCCKVQDATKPSKE-ENSLKPTNQGGSSNKEVSTFFLK 895

Query: 186  XXXXXXXXXXRSWPVHRQNGRHPESHQ 106
                       S P H      P SHQ
Sbjct: 896  PTGHANHDASTS-PEHHGKQDEPISHQ 921


>SB_47342| Best HMM Match : VWA (HMM E-Value=0)
          Length = 483

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 21/75 (28%), Positives = 26/75 (34%)
 Frame = -1

Query: 230 ETGPNTIAFPITTNPKXXXXXXXXXXXXXCTGRTDATPSPTSSAVATNSATMGRHHSHVQ 51
           E  P+T   PITT P               T R  +T  PTS  + T   T        +
Sbjct: 247 ENSPSTTRRPITTIPTSRPTRLSTPSTRRKTTRRASTIPPTSRPITTGVETTS---LITE 303

Query: 50  APPPPPATLSCLVAM 6
            P P P    C + M
Sbjct: 304 FPWPSPGHFKCSLFM 318


>SB_51044| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 610

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = +2

Query: 317 RRRQAHCLGSGRCWLRYRPPPSP 385
           R  Q  CL SGRC     PPP P
Sbjct: 472 RTHQPTCLVSGRCQKSLSPPPQP 494



 Score = 28.7 bits (61), Expect = 2.7
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = -1

Query: 131 TDATPSPTSSAVATNSATMGRHHSHVQAPPPPPATLSCL 15
           T  +PSP+ S+ +++S++     S   +PP PP +   L
Sbjct: 572 TSPSPSPSPSSSSSSSSSSSSSSSSSSSPPSPPRSFIIL 610


>SB_37962| Best HMM Match : Tcp10_C (HMM E-Value=5.9e-36)
          Length = 1290

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = -3

Query: 471  AGEHQHPGERGLDSGRSNRRDARPRHRTPGEGGGRYRSQQRPEPK 337
            AG  ++ G+         R+ ARP  +   +G  R+ +  RP+P+
Sbjct: 963  AGNDENSGKETRPRKEKQRKTARPSEQPEYQGVSRHPASDRPQPR 1007


>SB_59632| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 379

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
 Frame = +2

Query: 275 CAGCLSSQRSGT*WRRRQAHCLGSG---RCWLRYRPPPSPGVRCRGL 406
           C+G LS+  +G    R     L S    RC+ RY PPP P ++  G+
Sbjct: 114 CSGALSA--AGVVVTRSVTATLASADVRRCFCRYAPPPMPAMQDLGI 158


>SB_23539| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1041

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 17/57 (29%), Positives = 25/57 (43%)
 Frame = -3

Query: 429  GRSNRRDARPRHRTPGEGGGRYRSQQRPEPKQCACRLRHYVPERCEDRQPAQRDCRQ 259
            G + RRD R RHR+        R+  + E + C C       ER  D+   +R  +Q
Sbjct: 985  GAARRRDHRKRHRSKRAKVPVSRAGGQGETESCGCTRGVANAERSGDKHAKRRGLQQ 1041


>SB_22789| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 796

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -1

Query: 119 PSPTSSAVATNSATMGRHHSHVQAPPPPP 33
           P    SAVAT S ++ R   H +  PPPP
Sbjct: 311 PGYVRSAVATTSHSLPRGPVHAKKGPPPP 339


>SB_19340| Best HMM Match : EGF_CA (HMM E-Value=3.8e-27)
          Length = 888

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 15/32 (46%), Positives = 16/32 (50%)
 Frame = -1

Query: 110 TSSAVATNSATMGRHHSHVQAPPPPPATLSCL 15
           T S V TNS     H S  Q PP PPA +  L
Sbjct: 130 TESLVETNSTWNLLHSSIGQEPPEPPAVVQIL 161


>SB_53103| Best HMM Match : DUF1388 (HMM E-Value=0.29)
          Length = 462

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 15/60 (25%), Positives = 27/60 (45%)
 Frame = -3

Query: 450 GERGLDSGRSNRRDARPRHRTPGEGGGRYRSQQRPEPKQCACRLRHYVPERCEDRQPAQR 271
           GE+  + G++     R   +TP EG  R + Q++   K    R     PE  +++   +R
Sbjct: 137 GEKPPEEGKNRNTRKRQEQKTPEEGKNR-KHQKKARTKTTRSRQEQKTPEEGKNKNHQKR 195


>SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)
          Length = 483

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = -1

Query: 113 PTSSAVATNSATMGRHHSHVQAPPPPPATLSC 18
           PT++   T   T   H S    PPPPP    C
Sbjct: 155 PTTTKKPTTKPTPAPHSSPSPTPPPPPIIPPC 186


>SB_52455| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 229

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 18/79 (22%), Positives = 29/79 (36%)
 Frame = -3

Query: 444 RGLDSGRSNRRDARPRHRTPGEGGGRYRSQQRPEPKQCACRLRHYVPERCEDRQPAQRDC 265
           R  D+   +    R    TP +  GR  +++RPE +    R     P    DR   +   
Sbjct: 21  RNRDNSSDSVSSVRSERETPRDRNGRTATRRRPERRDERPRKLDDKPRELLDRDSGRAGS 80

Query: 264 RQCHRGVHVRTRDGAEHDR 208
            +     H R    A+ +R
Sbjct: 81  GEKREDKHRRLEKPAQRER 99


>SB_38952| Best HMM Match : 7tm_2 (HMM E-Value=1.7e-21)
          Length = 959

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -1

Query: 134 RTDATPSPTSSAVATN-SATMGRHHSHVQAPPPPPATL 24
           R+ A  + TS+ +  N SAT+        APPPPP  L
Sbjct: 76  RSGANVNTTSTPMTANQSATVTSQPQTTPAPPPPPPPL 113


>SB_35959| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1136

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
 Frame = -2

Query: 379 RWRPVPQPA---APRTQAVRLPPAPLRT 305
           R RP P+P+   APR +   LPP PL T
Sbjct: 772 RERPRPRPSQQPAPRGEGSNLPPLPLHT 799


>SB_57969| Best HMM Match : zf-CCHC (HMM E-Value=0.0097)
          Length = 410

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 7/56 (12%)
 Frame = -3

Query: 402 PRHRTPGEGGGRYRSQQRPEPKQC------ACRLRHYVPERCEDRQPA-QRDCRQC 256
           PR +T  +GG R  S++ P            C+  H +  R +++ PA Q+ C  C
Sbjct: 208 PRRKTGSKGGRRQESRKPPHTDSSKSNPHPKCKFCHRLHPRAKEKCPAWQKTCDTC 263


>SB_41562| Best HMM Match : DUF131 (HMM E-Value=2.7)
          Length = 332

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -1

Query: 122 TPSPTSSAVATNSATMGRHHSHVQAPPPPPATL 24
           TP+ TSSA ATN+ +     S    PP  PA+L
Sbjct: 54  TPAVTSSAAATNTDSNMEISSVAGEPPSIPASL 86


>SB_36935| Best HMM Match : Somatomedin_B (HMM E-Value=1.8e-06)
          Length = 231

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -1

Query: 134 RTDATPSPTSSAVATN-SATMGRHHSHVQAPPPPPATL 24
           R+ A  + TS+ +  N SAT+        APPPPP  L
Sbjct: 143 RSGANVNRTSTPMTANQSATVTSQPQTTPAPPPPPPPL 180


>SB_22220| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 369

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 7/56 (12%)
 Frame = -3

Query: 402 PRHRTPGEGGGRYRSQQRPEPKQC------ACRLRHYVPERCEDRQPA-QRDCRQC 256
           PR +T  +GG R  S++ P            C+  H +  R +++ PA Q+ C  C
Sbjct: 153 PRRKTGSKGGRRQESRKPPHTDSSKSNPHPKCKFCHRLHPRAKEKCPAWQKTCDTC 208


>SB_4600| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1140

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -3

Query: 417 RRDARPRHRTPGEGGGRYRSQQRP 346
           RR+A+ R   P  GGG +RS  RP
Sbjct: 418 RREAKRRFVRPSPGGGAHRSACRP 441


>SB_52550| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 297

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 12/22 (54%), Positives = 12/22 (54%), Gaps = 6/22 (27%)
 Frame = +2

Query: 353 CWLRY------RPPPSPGVRCR 400
           CWLRY       PPPSP   CR
Sbjct: 138 CWLRYCGNRGFHPPPSPPPECR 159


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,988,802
Number of Sequences: 59808
Number of extensions: 252053
Number of successful extensions: 1205
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1187
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1013948003
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)