Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_K11
         (574 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    23   2.4  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   5.6  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   9.9  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   9.9  

>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 12/49 (24%), Positives = 22/49 (44%)
 Frame = +1

Query: 145 KTQVMGASFRNTGEIRELAGCDLLTISPKLLQELAGSDHPLKRVLDPKL 291
           KT ++ A  ++     +L   D+L ++ K LQ L      +    DP +
Sbjct: 58  KTLILDAMKKDPARHSKLEKADILEMTVKHLQNLQRQQAAMSAATDPSV 106


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 11/43 (25%), Positives = 21/43 (48%)
 Frame = -3

Query: 440 VLIRDSSFLVSAANFRIPSDNLSVAI*SSFICQRNCDSDNDIF 312
           ++I  S F+ + + +RI +   ++    SFI   N   +  IF
Sbjct: 236 IIISGSIFMTTTSFYRILNSGYNLTTFGSFIFNANSAIEGIIF 278


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 565 TIISQFIVKIPKTTYKTCYILNIICYK 485
           +I+ QF+    + T K   +L   CYK
Sbjct: 144 SILQQFVAIFNEETDKLVEVLKEECYK 170


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 565 TIISQFIVKIPKTTYKTCYILNIICYK 485
           +I+ QF+    + T K   +L   CYK
Sbjct: 144 SILQQFVAIFNEETDKLVEVLKEECYK 170


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,215
Number of Sequences: 336
Number of extensions: 2847
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)