Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_K11
         (574 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    29   0.081
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    25   1.7  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   5.3  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   5.3  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   9.3  

>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 29.5 bits (63), Expect = 0.081
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -3

Query: 338 NCDSDNDIFSMSLCSDNFGSSTLFNGWSLPANS 240
           +  S N + + SLCS + GSST +   S P+N+
Sbjct: 185 SASSSNQLSNSSLCSASSGSSTYYGTMSEPSNA 217


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -1

Query: 172 GTRRPSLESYNRTSCNSYRHELLTKRLDLPLARTSYLYV 56
           G+R   LE+   TS N  R  + +  L L +++T Y+ V
Sbjct: 652 GSRIDDLENTIETSINIIRQWMESVELQLNISKTEYILV 690


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +1

Query: 280  DPKLSEQSDIEKISLSESQFRWQMNEDQMA 369
            DP+LS Q  ++ ++ + S   W+  +D+ A
Sbjct: 1747 DPELSSQLMVDSMNENASNCSWEAVDDRSA 1776


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +1

Query: 280  DPKLSEQSDIEKISLSESQFRWQMNEDQMA 369
            DP+LS Q  ++ ++ + S   W+  +D+ A
Sbjct: 1748 DPELSSQLMVDSMNENASNCSWEAVDDRSA 1777


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -3

Query: 458  HFLAKSVLIRDSSFLVSAANFRIPSDNL 375
            HF  ++ L+ D SF+ S  + RI  D++
Sbjct: 1452 HFPTETKLVFDISFIPSTTHGRIDIDHI 1479


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,217
Number of Sequences: 2352
Number of extensions: 11240
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54245403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)