Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_K10
(499 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117204-13|CAB55128.1| 286|Caenorhabditis elegans Hypothetical... 28 3.3
AF016425-6|AAY86242.1| 104|Caenorhabditis elegans Hypothetical ... 28 4.3
Z49132-7|CAA88986.1| 403|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z99288-10|CAB16552.2| 338|Caenorhabditis elegans Hypothetical p... 27 7.6
Z81483-7|CAB03964.2| 338|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z69903-1|CAA93772.1| 137|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z48178-3|CAC42246.1| 1553|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z48178-2|CAA88201.1| 1551|Caenorhabditis elegans Hypothetical pr... 27 10.0
U10401-5|AAA19060.1| 238|Caenorhabditis elegans Hypothetical pr... 27 10.0
AF025466-2|AAB71033.1| 261|Caenorhabditis elegans Hypothetical ... 27 10.0
>AL117204-13|CAB55128.1| 286|Caenorhabditis elegans Hypothetical
protein Y116A8C.22 protein.
Length = 286
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 166 CTNCQLRRHLRCYGQGTYNWKRKSQAQC 249
CT CQ HL+C G + W SQ QC
Sbjct: 256 CTKCQKWVHLKCTGIRSKQW--NSQFQC 281
>AF016425-6|AAY86242.1| 104|Caenorhabditis elegans Hypothetical
protein F59A7.11 protein.
Length = 104
Score = 27.9 bits (59), Expect = 4.3
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +2
Query: 38 LVSVLLVGVNSRYVLVEEPGYYIEQYEDQPEQWANSRVRRQAGALTVNSDGTS 196
L++ LL + V+ PG + ED + R RR G TV +DG++
Sbjct: 4 LINSLLFTIAILAVVWGYPGQQADHVEDLTKNRNEPRARRDLGTETVRADGSA 56
>Z49132-7|CAA88986.1| 403|Caenorhabditis elegans Hypothetical
protein ZK666.7 protein.
Length = 403
Score = 27.5 bits (58), Expect = 5.7
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 266 LTNQMKLGAATAGLAY--DNVNGHGATLTKTHIPGF 367
L +MK+ A A +AY DNVNG L++ PG+
Sbjct: 180 LATRMKVDVAIATVAYGQDNVNGFLRQLSQIATPGY 215
>Z99288-10|CAB16552.2| 338|Caenorhabditis elegans Hypothetical
protein ZK262.11 protein.
Length = 338
Score = 27.1 bits (57), Expect = 7.6
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -2
Query: 486 LKFGT*GIFGRFLVANALALK-SWLSLWKRFTLP 388
L+F T GI G F + K SW+ LWK+F P
Sbjct: 108 LQFVTLGITGIFENRFRIICKFSWVPLWKKFITP 141
>Z81483-7|CAB03964.2| 338|Caenorhabditis elegans Hypothetical
protein C43D7.6 protein.
Length = 338
Score = 27.1 bits (57), Expect = 7.6
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -2
Query: 486 LKFGT*GIFGRFLVANALALK-SWLSLWKRFTLP 388
L+F T GI G F + K SW+ LWK+F P
Sbjct: 108 LQFVTLGITGIFENRFRIICKFSWVPLWKKFITP 141
>Z69903-1|CAA93772.1| 137|Caenorhabditis elegans Hypothetical
protein F46F2.3 protein.
Length = 137
Score = 26.6 bits (56), Expect = 10.0
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +1
Query: 127 GAVGQLQGAPASGCTNCQLRR 189
G +G L GAPA GC C R
Sbjct: 22 GGLGGLFGAPAGGCDPCAAAR 42
>Z48178-3|CAC42246.1| 1553|Caenorhabditis elegans Hypothetical
protein C05C10.2b protein.
Length = 1553
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 5/33 (15%)
Frame = +2
Query: 398 NLFHNDNHDFSAKAFATKN-----LPNIPQVPN 481
N H+D DF+A ++ KN LP +P++PN
Sbjct: 530 NCRHSDAIDFAAMSYIWKNIRQQHLPKLPKLPN 562
>Z48178-2|CAA88201.1| 1551|Caenorhabditis elegans Hypothetical
protein C05C10.2a protein.
Length = 1551
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 5/33 (15%)
Frame = +2
Query: 398 NLFHNDNHDFSAKAFATKN-----LPNIPQVPN 481
N H+D DF+A ++ KN LP +P++PN
Sbjct: 530 NCRHSDAIDFAAMSYIWKNIRQQHLPKLPKLPN 562
>U10401-5|AAA19060.1| 238|Caenorhabditis elegans Hypothetical
protein T20B12.7 protein.
Length = 238
Score = 26.6 bits (56), Expect = 10.0
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +1
Query: 133 VGQLQGAPASGCTNCQLRRHLRC 201
+GQ+ P S C NC L RC
Sbjct: 191 MGQIAAEPKSSCGNCSLGDAFRC 213
>AF025466-2|AAB71033.1| 261|Caenorhabditis elegans Hypothetical
protein T23F4.1 protein.
Length = 261
Score = 26.6 bits (56), Expect = 10.0
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +1
Query: 217 YNWKRKSQAQCPW 255
Y WKRKS+++C W
Sbjct: 91 YLWKRKSRSRCEW 103
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,990,792
Number of Sequences: 27780
Number of extensions: 245996
Number of successful extensions: 634
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 634
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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