Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_K09
(592 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_04_0234 + 15187065-15188241,15188316-15188494 48 6e-06
04_03_0649 - 18402976-18403220,18403305-18404499 42 5e-04
12_02_0232 - 16015174-16015244,16015861-16016671,16018412-16018861 32 0.30
12_02_0239 - 16125105-16126025,16126966-16127415 31 0.91
08_01_0192 + 1594530-1594682,1594755-1594955,1595051-1595280,159... 30 1.2
05_03_0086 + 8279518-8280320,8280923-8281844 30 1.2
12_02_0234 - 16043995-16044894,16050069-16050200,16050278-16050718 29 2.8
07_01_0365 + 2718707-2718839,2719335-2719405,2719512-2719955,272... 29 3.7
12_02_0237 - 16087083-16087201,16087531-16088341,16097713-16098156 28 4.8
02_05_0272 - 27348537-27348728,27349035-27349192,27349292-273493... 28 4.8
12_02_0292 + 16979550-16980662,16983249-16983731 27 8.5
08_02_0113 - 12715888-12716181,12717443-12717602,12718327-127183... 27 8.5
07_01_0465 + 3513296-3513631,3514386-3514442,3515196-3515306,351... 27 8.5
05_03_0191 - 9521496-9521921 27 8.5
04_04_1358 + 32869222-32869306,32869947-32870008,32870301-328703... 27 8.5
>11_04_0234 + 15187065-15188241,15188316-15188494
Length = 451
Score = 48.0 bits (109), Expect = 6e-06
Identities = 43/185 (23%), Positives = 80/185 (43%)
Frame = +2
Query: 26 YNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPKRKPKKIRSSIGSFWHSIKKTFG 205
++ + R AF NS++ LA GFDG+DL+W+ P + ++G
Sbjct: 129 FSRMASEKNLRRAFINSSIELARANGFDGLDLAWRFPATQLD--MENLGDL--------- 177
Query: 206 TTPVDDKESEHREGFTALVREMKQALNVKPNMQLVISVLPNVNSSIYFDVPSIINLVDIV 385
+ + +E E T + L + + + ++++ + + + + +D V
Sbjct: 178 ---LAEWRAEIMEDSTT---RSTEPLLLTATVYFSNHLFGMADTNLNYPIDDMSSSLDWV 231
Query: 386 NIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTG 565
NI F + +N AP+Y ++D +A + W+ G P KLV+GI G
Sbjct: 232 NIITFSLH---KNSNVTTADAPLY---DKDSHFSASYGVISWLDAGLPPCKLVMGIPLFG 285
Query: 566 RTWKL 580
R+W L
Sbjct: 286 RSWFL 290
>04_03_0649 - 18402976-18403220,18403305-18404499
Length = 479
Score = 41.5 bits (93), Expect = 5e-04
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = +2
Query: 350 DVPS--IINLVDIVNIQAFDYYTP-ERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQN 520
D PS + +D VN+ AF P N + AP+Y +R +A + W+
Sbjct: 215 DYPSETVARSLDWVNVMAFGLRPPGAANANATAFDAPLY---DRASHYSASYGVVSWLDA 271
Query: 521 GAPTHKLVLGISTTGRTWKL 580
G P K+V+GI GR+W L
Sbjct: 272 GVPASKVVMGIPLYGRSWFL 291
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +2
Query: 14 DPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLP 136
DP + + P +R AF +A+ +A + GFDG+D++W+ P
Sbjct: 131 DPA-FAAMAADPASRAAFIGAAVKVARENGFDGLDVAWRFP 170
>12_02_0232 - 16015174-16015244,16015861-16016671,16018412-16018861
Length = 443
Score = 32.3 bits (70), Expect = 0.30
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +2
Query: 257 LVREMKQALNVKPNMQLVISVLPNVNSSIYFDVPSIINLVDI 382
LVR+ K + K NMQL++ +LP Y V I DI
Sbjct: 340 LVRKAKHEMKTKENMQLMVDLLPLWREKPYIKVERIFETCDI 381
>12_02_0239 - 16125105-16126025,16126966-16127415
Length = 456
Score = 30.7 bits (66), Expect = 0.91
Identities = 19/72 (26%), Positives = 31/72 (43%)
Frame = +2
Query: 167 IGSFWHSIKKTFGTTPVDDKESEHREGFTALVREMKQALNVKPNMQLVISVLPNVNSSIY 346
+G + + + T V + + E LVR+ K + + NMQL++ V+P Y
Sbjct: 310 LGYYGNGLMYPIVETTVKELCTNPLEHTIELVRKAKHKIRTEENMQLMVDVMPLWYEKPY 369
Query: 347 FDVPSIINLVDI 382
V I DI
Sbjct: 370 IKVQRIFETCDI 381
>08_01_0192 +
1594530-1594682,1594755-1594955,1595051-1595280,
1595596-1595766,1595902-1596007,1596339-1596545,
1596638-1596802
Length = 410
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +2
Query: 68 TNSALLLAEQYGFDGIDLSWQLPKRKPKKIRSSIGSFW 181
T +L+ E + FD L+W + R P +I++++ +W
Sbjct: 339 TKKMILVGEVFRFDLDTLTWSVIGRMPFRIKTALAGYW 376
>05_03_0086 + 8279518-8280320,8280923-8281844
Length = 574
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +2
Query: 32 LLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPKR-KPKKIRSSIGSFWHSIKKTFGT 208
LL++ P R AFT A + + FDG+ +W L + P + + F T
Sbjct: 478 LLVKEPHKRIAFTRGATEIKQHPFFDGV--NWALVRSLTPPSVPEPV-DFRQYAAAASAT 534
Query: 209 TPVDDKESEH 238
TP D K E+
Sbjct: 535 TPKDKKPPEN 544
>12_02_0234 - 16043995-16044894,16050069-16050200,16050278-16050718
Length = 490
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 257 LVREMKQALNVKPNMQLVISVLPNVNSSIYFDVPSIINLVDI 382
LVR+ K + + NMQL + +LP Y V I DI
Sbjct: 381 LVRKAKDEMKTEENMQLRVDLLPLWREKPYIKVQRIFEACDI 422
>07_01_0365 +
2718707-2718839,2719335-2719405,2719512-2719955,
2720660-2721802
Length = 596
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 474 ILYKTPTLL*ITGFKMVRLPTNLSLVSAPLDVRGSSI 584
++Y +PT++ + GF + LSLV+A L+ GS +
Sbjct: 293 VMYYSPTIVQLAGFASNQTALALSLVTAGLNAAGSLV 329
>12_02_0237 - 16087083-16087201,16087531-16088341,16097713-16098156
Length = 457
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 257 LVREMKQALNVKPNMQLVISVLPNVNSSIYFDVPSIINLVDI 382
LVR+ K + ++ NMQL + +LP Y + I DI
Sbjct: 338 LVRKAKDEMMIEENMQLRVDLLPLWREKPYIKLQRIFETCDI 379
>02_05_0272 -
27348537-27348728,27349035-27349192,27349292-27349323,
27349420-27349514,27349614-27349687,27349800-27349878,
27350015-27350078,27350156-27350218,27350300-27350442,
27350566-27350703,27350792-27350913,27350993-27351158,
27351276-27351398,27351609-27351680,27351773-27351880,
27352481-27352597,27352727-27352865,27352974-27353080,
27353167-27353276,27353892-27354025,27354106-27354255,
27354329-27354549,27354647-27355318
Length = 1092
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Frame = +2
Query: 212 PVDDKESEHREGFTALVREMKQALNV-KPN---MQLVISVLPNVNSSIYFDVPSI 364
P+ EH E AL ++A+N+ KP + L+I++LP+ N S+Y D+ I
Sbjct: 660 PLVTARPEHVE--RALKARYQEAMNILKPQGGELDLLIAILPDNNGSLYGDLKRI 712
>12_02_0292 + 16979550-16980662,16983249-16983731
Length = 531
Score = 27.5 bits (58), Expect = 8.5
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1
Query: 532 PQTCPWYQHHWTYVEARFR 588
P+ W QHHWT R R
Sbjct: 505 PEAKSWRQHHWTPARTRLR 523
>08_02_0113 -
12715888-12716181,12717443-12717602,12718327-12718368,
12718443-12718465,12718616-12720653,12720736-12720965,
12722207-12722329,12722438-12723010,12724684-12724733,
12726828-12726923,12726987-12727394,12727609-12727795
Length = 1407
Score = 27.5 bits (58), Expect = 8.5
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Frame = +2
Query: 296 NMQLVISVLPNVNSSIYFDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNRD 475
++Q+++S P + F V + N + +V + A +T K+AD + Q R
Sbjct: 570 DLQILLSSGPY--EELNFGVEAAENALSVVKLIAILIFTVHNANKDADNQSYAEIVQRRV 627
Query: 476 PLQNADAA----INYWIQNGAPTHKLVLGI 553
LQNA AA + Y ++ A H + I
Sbjct: 628 LLQNAFAAAFEFVGYLLKRCAELHDVASSI 657
>07_01_0465 +
3513296-3513631,3514386-3514442,3515196-3515306,
3515466-3515552,3515627-3515740,3515850-3516056,
3516291-3516428,3516691-3516852,3516939-3517138,
3517429-3517554,3517644-3517785
Length = 559
Score = 27.5 bits (58), Expect = 8.5
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 8/58 (13%)
Frame = +2
Query: 221 DKESEHREGFT---ALV-----REMKQALNVKPNMQLVISVLPNVNSSIYFDVPSIIN 370
+KE+ H EGF+ ALV +E+++ L V+P + +++ + Y D+P +IN
Sbjct: 139 EKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTKWIQSYRDLPLMIN 196
>05_03_0191 - 9521496-9521921
Length = 141
Score = 27.5 bits (58), Expect = 8.5
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +1
Query: 520 WCAYPQTCPWYQHHWTYVEARFR 588
W P+ W++ HWT AR R
Sbjct: 119 WQRRPEAEKWWRRHWTPARARLR 141
>04_04_1358 +
32869222-32869306,32869947-32870008,32870301-32870393,
32870640-32870761,32873139-32873167,32873586-32873891,
32873977-32874035,32874148-32874279,32874414-32874455,
32874560-32875093,32875189-32875379,32875538-32876027,
32876273-32876335,32876704-32876805,32876895-32877215,
32877294-32877386,32877484-32877585,32877718-32877822,
32877933-32878066,32878429-32878612,32879226-32879357,
32879447-32879559,32879628-32879709,32880328-32881992
Length = 1746
Score = 27.5 bits (58), Expect = 8.5
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +2
Query: 41 ESPQARTAFTNSALLLAEQYGFDGIDLSWQLPKRKPKKIRSSIGSFW-HSIKKTFGTTPV 217
+ P ++ N A L + D + +P P+ IR +GS W +++K
Sbjct: 569 QCPTPQSHVDNHARKLVRKILEDSLMKLENMPANNPRTIRWELGSSWLQNLQKKDSPASE 628
Query: 218 DDKESEHREGFTAL 259
D K + H E T +
Sbjct: 629 DKKNAGHVEKETTI 642
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,846,975
Number of Sequences: 37544
Number of extensions: 293061
Number of successful extensions: 870
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1400060088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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