SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_K09
         (592 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein si...    73   2e-13
At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein si...    60   8e-10
At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein si...    60   1e-09
At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein si...    60   1e-09
At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein si...    55   4e-08
At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein si...    52   2e-07
At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein si...    51   5e-07
At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein si...    51   5e-07
At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein si...    44   1e-04
At2g22650.1 68415.m02684 FAD-dependent oxidoreductase family pro...    30   1.3  
At1g30220.1 68414.m03697 sugar transporter family protein simila...    29   1.8  
At1g67790.1 68414.m07736 expressed protein                             29   2.3  
At5g42390.1 68418.m05161 metalloendopeptidase identical to chlor...    29   3.1  
At4g05170.1 68417.m00777 basic helix-loop-helix (bHLH) family pr...    29   3.1  
At4g18010.2 68417.m02680 inositol polyphosphate 5-phosphatase II...    28   4.1  
At3g26920.1 68416.m03368 F-box family protein contains F-box dom...    28   4.1  
At4g02680.1 68417.m00363 tetratricopeptide repeat (TPR)-containi...    27   7.1  
At3g27220.1 68416.m03403 kelch repeat-containing protein contain...    27   7.1  
At1g50790.1 68414.m05712 hypothetical protein                          27   7.1  
At4g16920.1 68417.m02552 disease resistance protein (TIR-NBS-LRR...    27   9.4  
At2g33570.1 68415.m04114 expressed protein                             27   9.4  

>At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein
           similar to chitinase/lysozyme GI:467689 from [Nicotiana
           tabacum]
          Length = 379

 Score = 72.5 bits (170), Expect = 2e-13
 Identities = 55/190 (28%), Positives = 87/190 (45%), Gaps = 1/190 (0%)
 Frame = +2

Query: 14  DPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPKRKPKKIRSSIGSFWHSIK 193
           D   Y  +  +P +R +F +S++ +A  YGF G+DL W+ P    +              
Sbjct: 102 DKTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWEYPSSATEMTN----------- 150

Query: 194 KTFGTTPVDDKESEHREGFTALVREMKQALNVKPNMQLVISVLPNVNS-SIYFDVPSIIN 370
             FGT          RE  +A+V E   +   KP + L  +V  + N  S+ + V ++ +
Sbjct: 151 --FGTLL--------REWRSAVVAEASSS--GKPRLLLAAAVFYSNNYYSVLYPVSAVAS 198

Query: 371 LVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLG 550
            +D VN+ A+D+Y P  + +     A ++ P N  P  + DA    WIQ G P  K VLG
Sbjct: 199 SLDWVNLMAYDFYGPGWS-RVTGPPAALFDPSNAGP--SGDAGTRSWIQAGLPAKKAVLG 255

Query: 551 ISTTGRTWKL 580
               G  W+L
Sbjct: 256 FPYYGYAWRL 265


>At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein
           similar to chitinase, class V GI:505267 from [Nicotiana
           tabacum]
          Length = 332

 Score = 60.5 bits (140), Expect = 8e-10
 Identities = 48/181 (26%), Positives = 81/181 (44%), Gaps = 1/181 (0%)
 Frame = +2

Query: 50  QARTAFTNSALLLAEQYGFDGIDLSWQLPKRKPKKIRSSIGSFWHSIKKTFGTTPVDDKE 229
           Q+R  F +S + +A   GF G+DL+W+ P    +   +  G+    ++           E
Sbjct: 105 QSRKTFIDSWIFIARSNGFHGLDLAWEYPYSDHEM--TDFGNLVGELRAAV--------E 154

Query: 230 SEHREGFTALVREMKQALNVKPNMQLVISVL-PNVNSSIYFDVPSIINLVDIVNIQAFDY 406
           +E R              + KP + L  +V   +V  +  + V  +   +D VNI A+D+
Sbjct: 155 AESRR-------------SSKPTLLLTAAVYYSSVYKTFTYPVQVMRESLDWVNIIAYDF 201

Query: 407 YTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLDS 586
           Y P  + K    TA ++   N +   + D+ +  WI++G P  K VLG S  G  W L +
Sbjct: 202 YGPVSSSKFTVPTAGLHVSSNNEG-PSGDSGLKQWIKDGLPEKKAVLGFSYVGWAWTLQN 260

Query: 587 D 589
           D
Sbjct: 261 D 261


>At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein
           similar to chitinase, class V GI:899342 from [Nicotiana
           tabacum]
          Length = 398

 Score = 60.1 bits (139), Expect = 1e-09
 Identities = 46/189 (24%), Positives = 81/189 (42%)
 Frame = +2

Query: 14  DPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPKRKPKKIRSSIGSFWHSIK 193
           D   +  +  +P +R +F  S + +A  YGF G+DL W+ P+ + +        F   ++
Sbjct: 81  DKDAFASMASNPDSRASFIQSTITVARSYGFHGLDLDWEYPRNEEEMY-----DFGKLLE 135

Query: 194 KTFGTTPVDDKESEHREGFTALVREMKQALNVKPNMQLVISVLPNVNSSIYFDVPSIINL 373
           +       +   S    G TAL+  +  A+    N Q            + + V +I N 
Sbjct: 136 EWRSAVEAESNSS----GTTALI--LTAAVYYSSNYQ-----------GVPYPVLAISNS 178

Query: 374 VDIVNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGI 553
           +D +N+ A+D+Y P  +       A +Y P +    ++ D+ +  W + G P  K VLG 
Sbjct: 179 LDWINLMAYDFYGPGWSTVTGP-PASLYLPTDG---RSGDSGVRDWTEAGLPAKKAVLGF 234

Query: 554 STTGRTWKL 580
              G  W L
Sbjct: 235 PYYGWAWTL 243


>At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein
           similar to chitinase/lysozyme GI:467689 from [Nicotiana
           tabacum]
          Length = 366

 Score = 59.7 bits (138), Expect = 1e-09
 Identities = 52/183 (28%), Positives = 83/183 (45%), Gaps = 1/183 (0%)
 Frame = +2

Query: 35  LLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPKRKPKKIRSSIGSFWHSIKKTFGTTP 214
           +  +P +R  F +S++ LA   GF G+DL+W+ P                SI     TT 
Sbjct: 107 MASNPTSRKLFISSSIKLARSCGFHGLDLNWKYP----------------SI-----TTE 145

Query: 215 VDDKESEHREGFTALVREMKQALNVKPNMQLVISVLPNVNS-SIYFDVPSIINLVDIVNI 391
           +D+     RE   A+  E + +   KP + L  +V  + +  S+   V ++ + +D VN+
Sbjct: 146 MDNFGKLLREWRLAVEAEARSS--GKPRLLLTAAVFYSYSYYSVLHPVNAVADSLDWVNL 203

Query: 392 QAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRT 571
            A+D+Y    + +     AP+Y P    P  + DA +  W Q G P  K VLG    G  
Sbjct: 204 VAYDFYE-SGSSRVTCSPAPLYDPITTGP--SGDAGVRAWTQAGLPAKKAVLGFPLYGYA 260

Query: 572 WKL 580
           W L
Sbjct: 261 WCL 263


>At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein
           similar to chitinase, class V GI:899342 from [Nicotiana
           tabacum]
          Length = 261

 Score = 54.8 bits (126), Expect = 4e-08
 Identities = 48/182 (26%), Positives = 73/182 (40%)
 Frame = +2

Query: 35  LLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPKRKPKKIRSSIGSFWHSIKKTFGTTP 214
           +  S   R +F  S + +A  YGFDG+DL W+ P+       + +  F   +K+      
Sbjct: 1   MASSSYGRKSFILSTISIARSYGFDGLDLDWEYPRNA-----AEMSDFAELLKEWRYAVQ 55

Query: 215 VDDKESEHREGFTALVREMKQALNVKPNMQLVISVLPNVNSSIYFDVPSIINLVDIVNIQ 394
            +   SE       L+            +   +    N N  +Y  V  I  L+D VNI+
Sbjct: 56  GEAYSSE----LPVLI------------LTATVYYSSNYNGVVY-PVKFISELLDWVNIK 98

Query: 395 AFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTW 574
           A+D+Y     P   + T P  A   +    + D+ +  WI  G P  K VLG    G  W
Sbjct: 99  AYDFY----GPGCTEVTGPPAALYLQSDGPSGDSGVKDWIDAGLPAEKAVLGFPYYGWAW 154

Query: 575 KL 580
            L
Sbjct: 155 TL 156


>At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein
           similar to chitinase, class V GI:899342 from [Nicotiana
           tabacum]
          Length = 363

 Score = 52.4 bits (120), Expect = 2e-07
 Identities = 50/192 (26%), Positives = 81/192 (42%), Gaps = 1/192 (0%)
 Frame = +2

Query: 14  DPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPKRKPKKIRSSIGSFWHSIK 193
           D   +  +  +P +R +F  SA+  A  Y FDG+DL W+ PK   +    + G      +
Sbjct: 91  DKSAFASMASNPTSRKSFIWSAISSARYYRFDGLDLVWKYPKDDVEM--RNFGQLLEQWR 148

Query: 194 KTFGTTPVDDKESEHREGFTALVREMKQALNVKPNMQLVISVLPNVNSSIYFDVPSIINL 373
           +      ++D ++E  E    L   +  A+   P           V  S+ + +  I   
Sbjct: 149 EA-----IED-DAERTERMPLL---LTAAVYYSP-----------VYDSVSYPIREIKKK 188

Query: 374 VDIVNIQAFDYYTPERNPKEADYTAPIYAPQN-RDPLQNADAAINYWIQNGAPTHKLVLG 550
           +D VN+ A+D+Y+           A ++ P N + P    D  +  WI+ G P  K VLG
Sbjct: 189 LDWVNLIAYDFYSSSTT---IGPPAALFDPSNPKGPC--GDYGLKEWIKAGLPAKKAVLG 243

Query: 551 ISTTGRTWKLDS 586
               G TW L S
Sbjct: 244 FPYVGWTWSLGS 255


>At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein
           similar to chitinase, class V GI:899342 from [Nicotiana
           tabacum]
          Length = 362

 Score = 51.2 bits (117), Expect = 5e-07
 Identities = 44/176 (25%), Positives = 78/176 (44%)
 Frame = +2

Query: 56  RTAFTNSALLLAEQYGFDGIDLSWQLPKRKPKKIRSSIGSFWHSIKKTFGTTPVDDKESE 235
           R AF +S++ +A +  F G+DL+W+ P    +     + +F   +K              
Sbjct: 104 RKAFIDSSIDIARKKDFYGLDLAWEYPSNDVE-----MANFGKLVK-------------- 144

Query: 236 HREGFTALVREMKQALNVKPNMQLVISVLPNVNSSIYFDVPSIINLVDIVNIQAFDYYTP 415
             E   A+V E  +   +   +   +   P+     Y  V +I + +D VNI A+D+Y P
Sbjct: 145 --EWRAAVVEESDRTNQLPLLLTAAVYYSPDYYGEEY-PVQAIADNLDFVNIMAYDFYGP 201

Query: 416 ERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLD 583
             +P      A ++ P N    ++ D+ ++ W++   P  K VLG S  G  W L+
Sbjct: 202 GWSPVTGP-PAALFDPSNPAG-RSGDSGLSKWLEAKLPAKKAVLGFSYCGWAWTLE 255


>At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein
           similar to chitinase, class V GI:899342 from [Nicotiana
           tabacum]
          Length = 289

 Score = 51.2 bits (117), Expect = 5e-07
 Identities = 43/187 (22%), Positives = 79/187 (42%), Gaps = 2/187 (1%)
 Frame = +2

Query: 35  LLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPKRKPKKIRSSIGSFWHSIKKTFGTTP 214
           ++ +  +R +F +S++ +A   GF G+DL+W+ P    +                FG   
Sbjct: 79  IVSNRTSRESFISSSISIARSLGFYGLDLAWEYPNNDVEM-------------NNFGKL- 124

Query: 215 VDDKESEHREGFTALVREMKQALNVKPNMQLVISVLPNVNSSIYFDVPSIINLVDIVNIQ 394
                    + + + V    Q   ++P +        +  +S+ + V +I   +D VN+ 
Sbjct: 125 --------LQEWRSAVEVESQRTGIRPLLLTAAVYYTSDYNSVSYPVQAINRSLDWVNLI 176

Query: 395 AFDYY--TPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGR 568
           A+++Y  T E  P      A +Y P  + P    D  + +W++ G P  K V G    G 
Sbjct: 177 AYEFYGLTTEIGPP-----AGLYDPSIKGPC--GDTGLKHWLKAGLPEKKAVFGFPYVGW 229

Query: 569 TWKLDSD 589
           +W LD D
Sbjct: 230 SWTLDDD 236


>At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein
           similar to chitinase, class V GI:505267 from [Nicotiana
           tabacum]
          Length = 365

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 42/177 (23%), Positives = 69/177 (38%), Gaps = 1/177 (0%)
 Frame = +2

Query: 56  RTAFTNSALLLAEQYGFDGIDLSWQLPKRKPKKIRSSIGSFWHSIKKTFGTTPVDDKESE 235
           R AF +S++ +A +  F G+DL+W+ P    +                FG          
Sbjct: 112 RKAFIDSSIDIARKKDFYGLDLAWEYPSNDVEMTN-------------FGKL-------- 150

Query: 236 HREGFTALVREMKQALNVKPNMQLVISVLPNVNSSIYFDVPSIINLVDIVNIQAFDYYTP 415
             E + A V E     N  P +             + + V +I + +D VNI A+D+Y P
Sbjct: 151 -LEEWRAAVVEESDKTNQLPLLLTAAVYYSPQYDGVEYPVKAIADNLDFVNIMAYDFYGP 209

Query: 416 ERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNG-APTHKLVLGISTTGRTWKLD 583
             +P      A  + P N    ++ ++ +  W+     P  K VLG    G  W L+
Sbjct: 210 GWSPVTGPPAALFHDPSN-PAGRSGNSGLRKWLDEAKLPPKKAVLGFPYCGWAWTLE 265


>At2g22650.1 68415.m02684 FAD-dependent oxidoreductase family
           protein
          Length = 420

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 101 GFDGIDLSWQLPKRKPKKIRSSI 169
           GF GI ++W L K  PK++R S+
Sbjct: 30  GFAGISVAWHLLKESPKELRLSV 52


>At1g30220.1 68414.m03697 sugar transporter family protein similar
           to SP|Q96QE2 Proton myo-inositol co-transporter (Hmit)
           [Homo sapiens]; contains Pfam profile PF00083: major
           facilitator superfamily protein
          Length = 580

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +3

Query: 474 ILYKTPTLL*ITGFKMVRLPTNLSLVSAPLDVRGSSI 584
           ++Y +PT++ + GF   R    LSLV+A L+  GS I
Sbjct: 294 VMYYSPTIVQLAGFASNRTALLLSLVTAGLNAFGSII 330


>At1g67790.1 68414.m07736 expressed protein
          Length = 576

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 10/74 (13%)
 Frame = -2

Query: 339 ELFTFGKTLITNCILGFTLSACFISRTRAVKPSL-C---------SDSLSSTGVVPNVFL 190
           E   F +  + N ILG TLS  +++  R VK +L C         +  +S T V   V L
Sbjct: 182 EKIPFKQAKLDNNILGETLSNIYLTTYRVVKSALTCMQQIPYFKQTQQISITEVQDKVTL 241

Query: 189 MLCQKDPILERIFF 148
           +L  K P+ E +FF
Sbjct: 242 LLLSKPPV-EPLFF 254


>At5g42390.1 68418.m05161 metalloendopeptidase identical to
           chloroplast processing enzyme metalloendopeptidase
           [Arabidopsis thaliana] gi|2827039|gb|AAC39482
          Length = 1265

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = -1

Query: 403 VKCLDVDNVDQVYDAWDVKVNGAIYVWQNADN*LHIGFYIECLF 272
           +K  DVD + + ++ W    N  +Y+  + DN   I   IE +F
Sbjct: 358 IKKWDVDKIRKFHERWYFPANATLYIVGDIDNIPRIVHNIEAVF 401


>At4g05170.1 68417.m00777 basic helix-loop-helix (bHLH) family
           protein contains Pfam profile: PF00010 helix-loop-helix
           DNA-binding domain
          Length = 296

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
 Frame = +2

Query: 200 FGTTPVDDKESEHREGFTALVREMKQALNVKPNMQLV-----ISVLPNVNSSIYFDVPSI 364
           FG    D+K ++H +G   +     + L + PN QL+      S +PN  S +  + P +
Sbjct: 44  FGWQNFDNKINDHNDGCMNMHNSFFEGLLIDPNDQLLPDPWSKSTIPNAKSELLENFPFL 103

Query: 365 INL 373
            N+
Sbjct: 104 DNM 106


>At4g18010.2 68417.m02680 inositol polyphosphate 5-phosphatase II
           (IP5PII) nearly identical to inositol polyphosphate
           5-phosphatase II [Arabidopsis thaliana] GI:10444263
           isoform contains an AT-acceptor splice site at intron 6
          Length = 613

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +2

Query: 35  LLESPQARTAFTNSALLLAEQYGFDGIDLSW-QLPKRKPKKIRSSIG 172
           L E+P   + F + A  L     F+ ++LSW  + +    KIR+S G
Sbjct: 292 LPENPSGASRFASEARQLKRSRSFETLNLSWNDIKEEDGDKIRNSYG 338


>At3g26920.1 68416.m03368 F-box family protein contains F-box domain
           Pfam:PF00646
          Length = 565

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 192 LMLCQKDPILERIFFGFLFGNCQ 124
           L+L  K P LE +  GF FG C+
Sbjct: 336 LLLSNKAPFLESLHLGFRFGECR 358


>At4g02680.1 68417.m00363 tetratricopeptide repeat (TPR)-containing
           protein contains Pfam profile PF00515 TPR Domain
          Length = 888

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +2

Query: 233 EHREGFTALVREMKQALNVKPNMQLVISVLPNVNS 337
           EH    T+ +R+ + AL+V PN Q ++ +   VNS
Sbjct: 851 EHIGDVTSALRDCRAALSVDPNHQEMLELHSRVNS 885


>At3g27220.1 68416.m03403 kelch repeat-containing protein contains
           Pfam PF01344: Kelch motif (4 repeats); contains Prosite
           PS00334: Myb DNA-binding domain repeat signature 2;
           similar to Male enhanced Antigen-1 (peas) (GI:20513270)
           [Mus musculus]
          Length = 426

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 10/39 (25%), Positives = 22/39 (56%)
 Frame = +2

Query: 68  TNSALLLAEQYGFDGIDLSWQLPKRKPKKIRSSIGSFWH 184
           T   +L+ E + F    L+W +  R P ++++++  FW+
Sbjct: 355 TKRLVLVGEIFRFQLDTLTWSVIGRLPYRVKTAMAGFWN 393


>At1g50790.1 68414.m05712 hypothetical protein
          Length = 812

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 15/73 (20%), Positives = 32/73 (43%)
 Frame = +2

Query: 293 PNMQLVISVLPNVNSSIYFDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNR 472
           P     ++++PN +   +      I +  +V I + ++Y P R   +      ++ P NR
Sbjct: 339 PEKATWVTLVPNRDDE-FISFARCIMVSQLVGIDSLEHYYPNRVASQFGRLQDVHCPVNR 397

Query: 473 DPLQNADAAINYW 511
           + L    A  +Y+
Sbjct: 398 NNLSREAAWNDYY 410


>At4g16920.1 68417.m02552 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 1304

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 22/83 (26%), Positives = 33/83 (39%)
 Frame = +2

Query: 146 PKKIRSSIGSFWHSIKKTFGTTPVDDKESEHREGFTALVREMKQALNVKPNMQLVISVLP 325
           P  +R  IG F    KKT    P D K+    +  T +     + L   PN   ++  + 
Sbjct: 106 PSHVRKQIGEFGKVFKKTCEDKPADQKQ-RWVKALTDISNIAGEDLRNGPNDAHMVEKIA 164

Query: 326 NVNSSIYFDVPSIINLVDIVNIQ 394
           N  S+  F  P      D+V I+
Sbjct: 165 NDVSNKLFHPPK--GFGDLVGIE 185


>At2g33570.1 68415.m04114 expressed protein
          Length = 496

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -3

Query: 485 FVEDRGSAVRKSVQCSPPLWGYVQVYNSQMPGC 387
           ++ + G+++R   Q   P WGY +VY   +  C
Sbjct: 147 WISNNGTSIRAKAQKILPDWGYGRVYTVVVVNC 179


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,139,901
Number of Sequences: 28952
Number of extensions: 243757
Number of successful extensions: 799
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 791
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1171109464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -