Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_K05
         (528 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7TP33 Cluster: Aa1-330; n=1; Rattus norvegicus|Rep: Aa...    42   0.007
UniRef50_Q6QI74 Cluster: LRRG00134; n=6; Euteleostomi|Rep: LRRG0...    42   0.007
UniRef50_Q26636 Cluster: Cathepsin L precursor (EC 3.4.22.15) [C...    41   0.020
UniRef50_O04892 Cluster: Cytochrome P450 like_TBP; n=10; Eukaryo...    37   0.25 
UniRef50_Q99JC0 Cluster: RRNA promoter binding protein; n=28; Eu...    36   0.44 
UniRef50_Q3U1V2 Cluster: B6-derived CD11 +ve dendritic cells cDN...    36   0.76 
UniRef50_Q6CQE6 Cluster: Kluyveromyces lactis strain NRRL Y-1140...    36   0.76 
UniRef50_A5HJW4 Cluster: Cathepsin L; n=3; Coelomata|Rep: Cathep...    33   5.4  

>UniRef50_Q7TP33 Cluster: Aa1-330; n=1; Rattus norvegicus|Rep:
          Aa1-330 - Rattus norvegicus (Rat)
          Length = 151

 Score = 42.3 bits (95), Expect = 0.007
 Identities = 17/19 (89%), Positives = 17/19 (89%)
 Frame = -3

Query: 58 RLFTLETCCGYGYEPARHL 2
          RLFTLETCCGYGY PAR L
Sbjct: 25 RLFTLETCCGYGYGPARDL 43


>UniRef50_Q6QI74 Cluster: LRRG00134; n=6; Euteleostomi|Rep:
           LRRG00134 - Rattus norvegicus (Rat)
          Length = 221

 Score = 42.3 bits (95), Expect = 0.007
 Identities = 17/19 (89%), Positives = 17/19 (89%)
 Frame = -3

Query: 58  RLFTLETCCGYGYEPARHL 2
           RLFTLETCCGYGY PAR L
Sbjct: 95  RLFTLETCCGYGYGPARDL 113


>UniRef50_Q26636 Cluster: Cathepsin L precursor (EC 3.4.22.15)
           [Contains: Cathepsin L heavy chain; Cathepsin L light
           chain]; n=71; Coelomata|Rep: Cathepsin L precursor (EC
           3.4.22.15) [Contains: Cathepsin L heavy chain; Cathepsin
           L light chain] - Sarcophaga peregrina (Flesh fly)
           (Boettcherisca peregrina)
          Length = 339

 Score = 40.7 bits (91), Expect = 0.020
 Identities = 15/23 (65%), Positives = 18/23 (78%)
 Frame = +3

Query: 93  NKYGDMLHHEFVQAMNGFNKTTK 161
           NKY DMLHHEF + MNG+N T +
Sbjct: 78  NKYADMLHHEFKETMNGYNHTLR 100


>UniRef50_O04892 Cluster: Cytochrome P450 like_TBP; n=10;
           Eukaryota|Rep: Cytochrome P450 like_TBP - Nicotiana
           tabacum (Common tobacco)
          Length = 530

 Score = 37.1 bits (82), Expect = 0.25
 Identities = 16/24 (66%), Positives = 18/24 (75%)
 Frame = -1

Query: 87  SLTYIILSTRGSSPWRPAADMGTN 16
           SL YI+ STRG SPWRP A +G N
Sbjct: 240 SLAYIVPSTRGCSPWRPDAFVGGN 263


>UniRef50_Q99JC0 Cluster: RRNA promoter binding protein; n=28;
           Euteleostomi|Rep: RRNA promoter binding protein - Rattus
           norvegicus (Rat)
          Length = 295

 Score = 36.3 bits (80), Expect = 0.44
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = -2

Query: 59  EALHLGDLLRIWVRTGA 9
           EA+HLGDLLRIWVR GA
Sbjct: 181 EAVHLGDLLRIWVRPGA 197


>UniRef50_Q3U1V2 Cluster: B6-derived CD11 +ve dendritic cells cDNA,
           RIKEN full-length enriched library, clone:F730204M12
           product:hypothetical protein, full insert sequence; n=3;
           Amniota|Rep: B6-derived CD11 +ve dendritic cells cDNA,
           RIKEN full-length enriched library, clone:F730204M12
           product:hypothetical protein, full insert sequence - Mus
           musculus (Mouse)
          Length = 136

 Score = 35.5 bits (78), Expect = 0.76
 Identities = 15/19 (78%), Positives = 16/19 (84%)
 Frame = +3

Query: 3   RCRAGSYPYPQQVSKVKSL 59
           + RAG YPYPQQVSKV SL
Sbjct: 112 KSRAGPYPYPQQVSKVNSL 130


>UniRef50_Q6CQE6 Cluster: Kluyveromyces lactis strain NRRL Y-1140
           chromosome D of strain NRRL Y- 1140 of Kluyveromyces
           lactis; n=2; Kluyveromyces lactis|Rep: Kluyveromyces
           lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-
           1140 of Kluyveromyces lactis - Kluyveromyces lactis
           (Yeast) (Candida sphaerica)
          Length = 144

 Score = 35.5 bits (78), Expect = 0.76
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = -2

Query: 71  FYRLEALHLGDLLRIWVRTG 12
           FY+LEA+HLGDLLR+ VR G
Sbjct: 86  FYQLEAVHLGDLLRLSVRPG 105


>UniRef50_A5HJW4 Cluster: Cathepsin L; n=3; Coelomata|Rep: Cathepsin
           L - Misgurnus mizolepis (Mud loach)
          Length = 337

 Score = 32.7 bits (71), Expect = 5.4
 Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = +3

Query: 93  NKYGDMLHHEFVQAMNGF-NKTTKHNKG 173
           N +GDM H EF Q MNG+ +KT +  KG
Sbjct: 78  NHFGDMNHEEFRQVMNGYKHKTERKFKG 105


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 318,915,878
Number of Sequences: 1657284
Number of extensions: 4253501
Number of successful extensions: 8582
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8582
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33455602480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)