Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_K03
(599 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 163 1e-40
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 161 4e-40
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 152 1e-37
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 151 3e-37
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 144 5e-35
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 126 8e-30
At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 126 8e-30
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 125 3e-29
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 124 3e-29
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 123 1e-28
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 118 2e-27
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 117 7e-27
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 112 1e-25
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 112 1e-25
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 110 6e-25
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 89 2e-18
At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu... 89 3e-18
At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc... 81 4e-16
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 71 8e-13
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 68 4e-12
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 66 2e-11
At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu... 52 3e-07
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 51 5e-07
At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase cyc... 38 0.005
At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase cyc... 38 0.005
At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase cyc... 38 0.005
At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase cyc... 38 0.005
At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase cyc... 35 0.036
At1g26940.1 68414.m03284 peptidyl-prolyl cis-trans isomerase cyc... 33 0.11
At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase cyc... 32 0.25
At5g06905.1 68418.m00780 cytochrome P450 family protein similar ... 29 2.4
At2g14880.1 68415.m01691 SWIB complex BAF60b domain-containing p... 29 3.1
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 28 4.1
At3g43300.1 68416.m04570 guanine nucleotide exchange family prot... 28 5.4
At5g66430.1 68418.m08378 S-adenosyl-L-methionine:carboxyl methyl... 27 7.2
At3g29310.1 68416.m03680 calmodulin-binding protein-related 27 7.2
At3g21170.1 68416.m02674 F-box family protein contains Pfam prof... 27 7.2
At5g03110.1 68418.m00259 expressed protein various predicted pro... 27 9.5
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 163 bits (395), Expect = 1e-40
Identities = 83/153 (54%), Positives = 104/153 (67%), Gaps = 7/153 (4%)
Frame = +2
Query: 161 VLGILLFVAVAQSEDSPKGPKVTHKVTFHMKIGDEAVGNIVIGLFGKTVPKTVDNFYQLA 340
+LG L + +S+++ K ++THKV F ++I +A G IV+GLFGKTVPKTV+NF L
Sbjct: 14 LLGTLSAIQAKKSKENLK--EITHKVYFDVEIDGKAAGRIVMGLFGKTVPKTVENFRALC 71
Query: 341 QKPEGEG-------YKGSKFHRVIDNFMIQXXXXXXXXXXXXRSIYGERFNDENFKLRHY 499
+G G YKGS FHR+I +FM+Q SIYGE+F DENFKL+H
Sbjct: 72 TGEKGIGKNGKALHYKGSSFHRIIPSFMLQGGDFTHGNGMGGESIYGEKFADENFKLKHT 131
Query: 500 GAGWLSMANAGKDTNGSQFFITTVKTPWLDGRH 598
G G+LSMANAG+DTNGSQFFITTV T WLDGRH
Sbjct: 132 GPGFLSMANAGQDTNGSQFFITTVTTSWLDGRH 164
>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP5) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443755|gb|AAB71401
Length = 201
Score = 161 bits (390), Expect = 4e-40
Identities = 82/158 (51%), Positives = 102/158 (64%), Gaps = 7/158 (4%)
Frame = +2
Query: 146 AAFATVLGILLFVAVAQSEDSPKGPKVTHKVTFHMKIGDEAVGNIVIGLFGKTVPKTVDN 325
A+F + + LF A+A + +VTHKV F ++I ++ G +VIGLFGK VPKT +N
Sbjct: 4 ASFILLGTLFLFGAIASIQAKEDLKEVTHKVYFDVEIDGKSAGRVVIGLFGKAVPKTAEN 63
Query: 326 FYQLAQKPEGEG-------YKGSKFHRVIDNFMIQXXXXXXXXXXXXRSIYGERFNDENF 484
F L +G G YKGSKFHR+I +FMIQ SIYG++F DENF
Sbjct: 64 FRALCTGEKGVGKSGKPLHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENF 123
Query: 485 KLRHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRH 598
KL+H G G LSMAN+G+DTNGSQFFITTV T WLDGRH
Sbjct: 124 KLKHTGPGVLSMANSGEDTNGSQFFITTVTTSWLDGRH 161
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 152 bits (369), Expect = 1e-37
Identities = 75/139 (53%), Positives = 90/139 (64%)
Frame = +2
Query: 182 VAVAQSEDSPKGPKVTHKVTFHMKIGDEAVGNIVIGLFGKTVPKTVDNFYQLAQKPEGEG 361
+A + E KVT+KV F ++IG E G IV+GLFG+ VPKTV+NF L + G
Sbjct: 79 MAAEEEEVIEPQAKVTNKVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYG 138
Query: 362 YKGSKFHRVIDNFMIQXXXXXXXXXXXXRSIYGERFNDENFKLRHYGAGWLSMANAGKDT 541
YKGS FHR+I +FMIQ SIYG +F DENF L+H G G LSMANAG +T
Sbjct: 139 YKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGPGILSMANAGPNT 198
Query: 542 NGSQFFITTVKTPWLDGRH 598
NGSQFFI TVKT WLD +H
Sbjct: 199 NGSQFFICTVKTSWLDNKH 217
>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 259
Score = 151 bits (366), Expect = 3e-37
Identities = 73/129 (56%), Positives = 87/129 (67%), Gaps = 3/129 (2%)
Frame = +2
Query: 221 KVTHKVTFHMKIGD---EAVGNIVIGLFGKTVPKTVDNFYQLAQKPEGEGYKGSKFHRVI 391
K+THKV F + +G+ + G IVIGL+G VP+TV+NF L +G GYKGS FHRVI
Sbjct: 87 KITHKVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVI 146
Query: 392 DNFMIQXXXXXXXXXXXXRSIYGERFNDENFKLRHYGAGWLSMANAGKDTNGSQFFITTV 571
+FMIQ +S+YG F DENFKL H G G LSMANAG +TNGSQFFI T+
Sbjct: 147 RDFMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTI 206
Query: 572 KTPWLDGRH 598
KT WLDGRH
Sbjct: 207 KTSWLDGRH 215
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 228
Score = 144 bits (348), Expect = 5e-35
Identities = 71/132 (53%), Positives = 84/132 (63%), Gaps = 7/132 (5%)
Frame = +2
Query: 224 VTHKVTFHMKIGDEAVGNIVIGLFGKTVPKTVDNFYQLAQKPEGEG-------YKGSKFH 382
VTHKV F ++I G I+IGLFG VPKT +NF L +G G +KGS FH
Sbjct: 57 VTHKVYFDIQINGSPAGRILIGLFGNIVPKTAENFRSLCTGEKGVGNMGKPLYFKGSSFH 116
Query: 383 RVIDNFMIQXXXXXXXXXXXXRSIYGERFNDENFKLRHYGAGWLSMANAGKDTNGSQFFI 562
R+I FMIQ SIYG++F DENFKL+H G G+LSMAN+G D+NGSQFFI
Sbjct: 117 RIIPGFMIQGGDFTRGDGRGGESIYGDKFADENFKLKHTGPGFLSMANSGPDSNGSQFFI 176
Query: 563 TTVKTPWLDGRH 598
TTV T WLDG H
Sbjct: 177 TTVTTSWLDGHH 188
>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
cyclophilin / rotamase / cyclosporin A-binding protein
(ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
(Cyclosporin A-binding protein) {Arabidopsis thaliana}
Length = 172
Score = 126 bits (305), Expect = 8e-30
Identities = 65/129 (50%), Positives = 77/129 (59%), Gaps = 7/129 (5%)
Frame = +2
Query: 233 KVTFHMKIGDEAVGNIVIGLFGKTVPKTVDNFYQLAQKPEGEG-------YKGSKFHRVI 391
KV F M I + G IV+ L+ P+T +NF L +G G +KGSKFHRVI
Sbjct: 5 KVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRVI 64
Query: 392 DNFMIQXXXXXXXXXXXXRSIYGERFNDENFKLRHYGAGWLSMANAGKDTNGSQFFITTV 571
NFM Q SIYG +F DENF+ +H G G LSMANAG +TNGSQFFI TV
Sbjct: 65 PNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFFICTV 124
Query: 572 KTPWLDGRH 598
KT WLDG+H
Sbjct: 125 KTDWLDGKH 133
>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34790
Length = 174
Score = 126 bits (305), Expect = 8e-30
Identities = 66/129 (51%), Positives = 76/129 (58%), Gaps = 7/129 (5%)
Frame = +2
Query: 233 KVTFHMKIGDEAVGNIVIGLFGKTVPKTVDNFYQLAQKPEGEG-------YKGSKFHRVI 391
KV F M IG G IV+ L+ PKT +NF L +G G +KGS FHRVI
Sbjct: 6 KVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVI 65
Query: 392 DNFMIQXXXXXXXXXXXXRSIYGERFNDENFKLRHYGAGWLSMANAGKDTNGSQFFITTV 571
NFM Q SIYG +F DENF+ +H G G LSMANAG +TNGSQFFI TV
Sbjct: 66 PNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFICTV 125
Query: 572 KTPWLDGRH 598
KT WLDG+H
Sbjct: 126 KTDWLDGKH 134
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 125 bits (301), Expect = 3e-29
Identities = 62/133 (46%), Positives = 82/133 (61%), Gaps = 7/133 (5%)
Frame = +2
Query: 221 KVTHKVTFHMKIGDEAVGNIVIGLFGKTVPKTVDNFYQLAQKPEGEG-------YKGSKF 379
++T++V + I + +G IVIGL+G VPKTV+NF L +G+ YKG+ F
Sbjct: 44 EITNRVFLDVDIDGQRLGRIVIGLYGTVVPKTVENFRALCTGEKGKTSSGKPLHYKGTPF 103
Query: 380 HRVIDNFMIQXXXXXXXXXXXXRSIYGERFNDENFKLRHYGAGWLSMANAGKDTNGSQFF 559
HR+I F+IQ SIYG F DENFK++H AG ++MAN G D+NGSQFF
Sbjct: 104 HRIISGFVIQGGDIIHGDGKSSDSIYGGTFPDENFKIQHSHAGMVAMANTGPDSNGSQFF 163
Query: 560 ITTVKTPWLDGRH 598
ITTVK WL+G H
Sbjct: 164 ITTVKASWLEGEH 176
>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
cytosolic / cyclophilin / rotamase (ROC3) identical to
cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
Length = 173
Score = 124 bits (300), Expect = 3e-29
Identities = 64/129 (49%), Positives = 75/129 (58%), Gaps = 7/129 (5%)
Frame = +2
Query: 233 KVTFHMKIGDEAVGNIVIGLFGKTVPKTVDNFYQLAQKPEGEG-------YKGSKFHRVI 391
KV F M +G ++ G IV+ L+ T P+T +NF L G G YKGS FHRVI
Sbjct: 6 KVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRVI 65
Query: 392 DNFMIQXXXXXXXXXXXXRSIYGERFNDENFKLRHYGAGWLSMANAGKDTNGSQFFITTV 571
FM Q SIYG +F DENF +H G G LSMANAG +TNGSQFFI T
Sbjct: 66 PKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFFICTE 125
Query: 572 KTPWLDGRH 598
KT WLDG+H
Sbjct: 126 KTSWLDGKH 134
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 123 bits (296), Expect = 1e-28
Identities = 63/129 (48%), Positives = 74/129 (57%), Gaps = 7/129 (5%)
Frame = +2
Query: 233 KVTFHMKIGDEAVGNIVIGLFGKTVPKTVDNFYQLAQKPEGEG-------YKGSKFHRVI 391
KV F + IG G +V+ LF P+T +NF L G G YKGS FHR+I
Sbjct: 5 KVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAFHRII 64
Query: 392 DNFMIQXXXXXXXXXXXXRSIYGERFNDENFKLRHYGAGWLSMANAGKDTNGSQFFITTV 571
FM Q SIYG +F DENFKL+H G G LSMAN+G +TNGSQFFI T
Sbjct: 65 PGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGPNTNGSQFFICTE 124
Query: 572 KTPWLDGRH 598
KT WLDG+H
Sbjct: 125 KTSWLDGKH 133
>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
cyclophilin-40 (CYP40) / rotamase identical to
cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
supporting cDNA gi|13442982|gb|AY026065.1|
Length = 361
Score = 118 bits (285), Expect = 2e-27
Identities = 63/130 (48%), Positives = 77/130 (59%), Gaps = 8/130 (6%)
Frame = +2
Query: 233 KVTFHMKIGDEAVGNIVIGLFGKTVPKTVDNFYQLAQKPEGEG--------YKGSKFHRV 388
K + IG E G IVI L+ VPKT +NF L +G G YKG++FHRV
Sbjct: 5 KCFMDISIGGELEGRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNRFHRV 64
Query: 389 IDNFMIQXXXXXXXXXXXXRSIYGERFNDENFKLRHYGAGWLSMANAGKDTNGSQFFITT 568
I FMIQ SIYG +F+DENF+L+H G LSMAN+G +TNGSQFFITT
Sbjct: 65 IKGFMIQGGDISANDGTGGESIYGLKFDDENFELKHERKGMLSMANSGPNTNGSQFFITT 124
Query: 569 VKTPWLDGRH 598
+T LDG+H
Sbjct: 125 TRTSHLDGKH 134
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 117 bits (281), Expect = 7e-27
Identities = 61/129 (47%), Positives = 73/129 (56%), Gaps = 7/129 (5%)
Frame = +2
Query: 233 KVTFHMKIGDEAVGNIVIGLFGKTVPKTVDNFYQLAQKPEGEG-------YKGSKFHRVI 391
+V F M + +G I + LF T P T +NF L +G G +KGS FHRVI
Sbjct: 5 RVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIFHRVI 64
Query: 392 DNFMIQXXXXXXXXXXXXRSIYGERFNDENFKLRHYGAGWLSMANAGKDTNGSQFFITTV 571
FM Q SIYG +F DENF +H GAG LSMAN+G +TNGSQFFI T
Sbjct: 65 PGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFFICTD 124
Query: 572 KTPWLDGRH 598
KT WLDG+H
Sbjct: 125 KTSWLDGKH 133
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 112 bits (270), Expect = 1e-25
Identities = 63/134 (47%), Positives = 73/134 (54%), Gaps = 8/134 (5%)
Frame = +2
Query: 221 KVTHKVTFHMKIGDEAVGNIVIGLFGKTVPKTVDNFYQLAQKPEGEG--------YKGSK 376
K V + IG + V IVI LF VPKT +NF L G G +KGS
Sbjct: 4 KKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGSS 63
Query: 377 FHRVIDNFMIQXXXXXXXXXXXXRSIYGERFNDENFKLRHYGAGWLSMANAGKDTNGSQF 556
FHRVI FM Q SIYG +F+DENF+L H GAG LSMAN G +TNGSQF
Sbjct: 64 FHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGPNTNGSQF 123
Query: 557 FITTVKTPWLDGRH 598
FI + P LDG+H
Sbjct: 124 FILFKRQPHLDGKH 137
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 112 bits (270), Expect = 1e-25
Identities = 63/134 (47%), Positives = 73/134 (54%), Gaps = 8/134 (5%)
Frame = +2
Query: 221 KVTHKVTFHMKIGDEAVGNIVIGLFGKTVPKTVDNFYQLAQKPEGEG--------YKGSK 376
K V + IG + V IVI LF VPKT +NF L G G +KGS
Sbjct: 4 KKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGSS 63
Query: 377 FHRVIDNFMIQXXXXXXXXXXXXRSIYGERFNDENFKLRHYGAGWLSMANAGKDTNGSQF 556
FHRVI FM Q SIYG +F+DENF+L H GAG LSMAN G +TNGSQF
Sbjct: 64 FHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGPNTNGSQF 123
Query: 557 FITTVKTPWLDGRH 598
FI + P LDG+H
Sbjct: 124 FILFKRQPHLDGKH 137
>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Homo sapiens]
gi|3647230|gb|AAC60793
Length = 199
Score = 110 bits (265), Expect = 6e-25
Identities = 60/135 (44%), Positives = 73/135 (54%), Gaps = 5/135 (3%)
Frame = +2
Query: 209 PKGPKVTHKVTFHMKIGDEAVGNIVIGLFGKTVPKTVDNFYQLAQ---KPEGE--GYKGS 373
P PK V F + IG G I + LF PKT +NF Q + G+ GYK
Sbjct: 26 PPNPK-NPVVFFDVSIGGIPAGRIKMELFADIAPKTAENFRQFCTGELRKAGKPLGYKEC 84
Query: 374 KFHRVIDNFMIQXXXXXXXXXXXXRSIYGERFNDENFKLRHYGAGWLSMANAGKDTNGSQ 553
+FHRVI +FM+Q SIYG +F DENF +H G G LSMAN+G +TNG Q
Sbjct: 85 QFHRVIKDFMVQSGDFLKNDGSGCMSIYGHKFEDENFTAKHTGPGLLSMANSGPNTNGCQ 144
Query: 554 FFITTVKTPWLDGRH 598
FFIT K WLD +H
Sbjct: 145 FFITCAKCDWLDNKH 159
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 89.0 bits (211), Expect = 2e-18
Identities = 53/111 (47%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
Frame = +2
Query: 269 VGNIVIGLFGKTVPKTVDNFYQLAQKPEGEGYKGSKFHRVIDNFMIQXXXXXXXXXXXXR 448
+G+I + L+ + PKTV+NF + Y FHRVI FMIQ +
Sbjct: 484 LGDIHMKLYPEECPKTVENFTTHCRNGY---YDNHLFHRVIRGFMIQTGDPLGDGTGG-Q 539
Query: 449 SIYGERFNDENFK-LRHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRH 598
SI+G F DE K LRH LSMANAG +TNGSQFFITTV TPWLD +H
Sbjct: 540 SIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKH 590
>At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
contains Pfam domain, PF00160: peptidyl-prolyl cis-trans
isomerase, cyclophilin-type
Length = 164
Score = 88.6 bits (210), Expect = 3e-18
Identities = 47/114 (41%), Positives = 68/114 (59%), Gaps = 1/114 (0%)
Frame = +2
Query: 260 DEAVGNIVIGLFGKTVPKTVDNFYQLAQKPEGEGYKGSKFHRVIDNFMIQXXXXXXXXXX 439
+ ++G + ++ K P+T NF +L+++ Y FHR++ +F++Q
Sbjct: 15 ETSMGPFTVEMYYKHSPRTCRNFLELSRRGY---YDNVLFHRIVKDFIVQGGDPTGTGRG 71
Query: 440 XXRSIYGERFNDE-NFKLRHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRH 598
SIYG +F DE N +L+H GAG LSMANAG +TNGSQFFIT P LDG+H
Sbjct: 72 G-ESIYGSKFEDEINKELKHTGAGILSMANAGPNTNGSQFFITLAPQPSLDGKH 124
>At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 160
Score = 81.4 bits (192), Expect = 4e-16
Identities = 52/120 (43%), Positives = 64/120 (53%), Gaps = 1/120 (0%)
Frame = +2
Query: 236 VTFHMKIGDEAVGNIVIGLFGKTVPKTVDNFYQLAQKPEGEGYKGSKFHRVIDNFMIQXX 415
VT H +GD I +F VPK+ +NF L Y G+ FHR I FMIQ
Sbjct: 3 VTLHTNLGD-----IKCEIFCDEVPKSAENFLALCASGY---YDGTIFHRNIKGFMIQGG 54
Query: 416 XXXXXXXXXXRSIYGERFNDE-NFKLRHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDG 592
SI+G++FNDE L+H G LSMAN+G +TNGSQFFIT K P L+G
Sbjct: 55 DPKGTGKGGT-SIWGKKFNDEIRDSLKHNARGMLSMANSGPNTNGSQFFITYAKQPHLNG 113
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 70.5 bits (165), Expect = 8e-13
Identities = 44/110 (40%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Frame = +2
Query: 272 GNIVIGLFGKTVPKTVDNFYQLAQKPEGEGYKGSKFHRVIDNFMIQXXXXXXXXXXXXRS 451
G++ I L P+ +NF L ++ Y G FHR I NFMIQ S
Sbjct: 353 GDLNIELHCDIAPRACENFITLCERGY---YNGVAFHRSIRNFMIQGGDPTGTGKGG-ES 408
Query: 452 IYGERFNDE-NFKLRHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRH 598
I+G+ F DE N KL H G G +SMAN+G TNGSQFF+ L+ +H
Sbjct: 409 IWGKPFKDEPNSKLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKH 458
>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 504
Score = 68.1 bits (159), Expect = 4e-12
Identities = 47/112 (41%), Positives = 60/112 (53%), Gaps = 3/112 (2%)
Frame = +2
Query: 272 GNIVIGLFGKTVPKTVDNFYQLAQKPEGEGY-KGSKFHRVIDNFMIQXXXXXXXXXXXXR 448
G I + L+ K PK+V NF QL EGY + FHRVI F++Q
Sbjct: 22 GPIDVELWPKEAPKSVRNFVQLCL----EGYFDNTIFHRVIPGFLVQGGDPTGSGTGGD- 76
Query: 449 SIYGERFNDE-NFKLRHYGAGWLSMANAGK-DTNGSQFFITTVKTPWLDGRH 598
SIYG F DE + +LR G ++MANA ++NGSQFF T K WLD +H
Sbjct: 77 SIYGGVFADEFHSRLRFSHRGIVAMANASSPNSNGSQFFFTLDKCDWLDKKH 128
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 65.7 bits (153), Expect = 2e-11
Identities = 45/131 (34%), Positives = 58/131 (44%), Gaps = 8/131 (6%)
Frame = +2
Query: 221 KVTHKVTFHMKIGDEAVGNIVIGLFGKTVPKTVDNFYQLAQKPEGEG--------YKGSK 376
K +V + I + +V LF + PKT +NF L +G G YKGS
Sbjct: 4 KKNPQVFMDVSIDGDPAETMVFELFPEVAPKTSENFRALCTGEKGIGPRSGKPLHYKGSF 63
Query: 377 FHRVIDNFMIQXXXXXXXXXXXXRSIYGERFNDENFKLRHYGAGWLSMANAGKDTNGSQF 556
FHR++ Q SIY +F DE+ KLRH G LSM+ A +D GS F
Sbjct: 64 FHRIMKGSSAQAGDFVNRNGTAGESIYAGKFPDESPKLRHEETGLLSMSIADRDKFGSHF 123
Query: 557 FITTVKTPWLD 589
IT LD
Sbjct: 124 HITFRPNQQLD 134
>At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase PPIase
(cyclophilin, cyclosporin A-binding protein) [Tomato]
SWISS-PROT:P21568
Length = 232
Score = 52.0 bits (119), Expect = 3e-07
Identities = 41/118 (34%), Positives = 53/118 (44%), Gaps = 8/118 (6%)
Frame = +2
Query: 233 KVTFHMKIGDEAVGNIVIGLFGKTVPKTVDNFYQLAQKPEGEG-------YKGSKFHRVI 391
KV F + + + G IVI LF P+T +NF L G G YKGS F ++
Sbjct: 5 KVFFDLTVDGKPAGRIVIELFADLTPRTAENFRGLCTGERGIGKCGKPIHYKGSTFDHIV 64
Query: 392 DNFMIQXXXXXXXXXXXXRSIYGERFNDENFKLRHY-GAGWLSMANAGKDTNGSQFFI 562
+ M I+ E +DE F L H G G +SMA D+NGSQF I
Sbjct: 65 PDLM----WCGGDIIFENEPIHSEELDDEYFILNHEDGPGIISMA----DSNGSQFQI 114
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 51.2 bits (117), Expect = 5e-07
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Frame = +2
Query: 266 AVGNIVIGLFGKTVPKTVDNFYQLAQKPEGEGYKGSKFHRVIDNFMIQX---XXXXXXXX 436
++G+IVI L P T NF +L + + Y G FH V +F Q
Sbjct: 8 SLGDIVIDLHSDKCPLTCKNFLKLCKI---KYYNGCLFHTVQKDFTAQTGDPTGTGAGGD 64
Query: 437 XXXRSIYGER---FNDE-NFKLRHYGAGWLSMANAGKDTNGSQFFIT-TVKTPWLDGRH 598
+ +YGE+ + DE + L+H G ++MA+ G++ N SQF+ T +LDG+H
Sbjct: 65 SIYKFLYGEQARFYKDEIHLDLKHSKTGTVAMASGGENLNASQFYFTLRDDLDYLDGKH 123
>At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 37.9 bits (84), Expect = 0.005
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +2
Query: 272 GNIVIGLFGKTVPKTVDNFYQLAQKPEGEGYKGSKFHRVIDNFMIQ 409
G I + LF + P+ VD F L QK + +KG F RVI N+++Q
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQK---DHFKGMPFQRVIKNYLVQ 132
>At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 37.9 bits (84), Expect = 0.005
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +2
Query: 272 GNIVIGLFGKTVPKTVDNFYQLAQKPEGEGYKGSKFHRVIDNFMIQ 409
G I + LF + P+ VD F L QK + +KG F RVI N+++Q
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQK---DHFKGMPFQRVIKNYLVQ 132
>At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 37.9 bits (84), Expect = 0.005
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +2
Query: 272 GNIVIGLFGKTVPKTVDNFYQLAQKPEGEGYKGSKFHRVIDNFMIQ 409
G I + LF + P+ VD F L QK + +KG F RVI N+++Q
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQK---DHFKGMPFQRVIKNYLVQ 132
>At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 230
Score = 37.9 bits (84), Expect = 0.005
Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Frame = +2
Query: 260 DEAVGNIVIGLFGKTVPKTVDNFYQLAQKPEGEGY-KGSKFHRVIDNFMIQXXXXXXXXX 436
D G++ I LF T P VD F + Q +GY KG F RV+ +F+IQ
Sbjct: 83 DTGKGSVTIELFKDTAPNVVDQFMKFCQ----DGYFKGFLFSRVVKHFVIQAGDSAEFDA 138
Query: 437 XXXRSIYGERFN-DENFKLRHYGAGWLSMANAGKDTNGSQFFITTVK 574
++ +R N D + K + G A + G +FFI + +
Sbjct: 139 VKDWAL--DRKNIDTSLKHEEFMVG---TPKAKNEQGGFEFFIVSAQ 180
>At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 317
Score = 35.1 bits (77), Expect = 0.036
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +2
Query: 227 THKVTFHMKIGDEAVGNIVIGLFGKTVPKTVDNFYQLAQKPEGEGYKGSKFHRVIDNFM 403
T K + I E +G I+IGL+G VP F + G Y+ F +++ ++
Sbjct: 91 TKKAFIDVSIDGEPIGRIIIGLYGDDVPAGTARFSSIVSGKAGITYRRKDFVKIMPGYV 149
>At1g26940.1 68414.m03284 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 226
Score = 33.5 bits (73), Expect = 0.11
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +2
Query: 164 LGILLFVAVAQSEDSPKGPKV-THKVTFHMKIGDEAVGNIVIGLFGKTVPKTVDNFYQLA 340
L L FV++A++ P P++ + +V F GD I G + PKTVD+ ++L
Sbjct: 11 LACLAFVSIAKA--LPHEPELGSARVVFQTSYGD-----IEFGFYPTVAPKTVDHIFKLV 63
Query: 341 QKPEGEGYKGSKFHRVIDNFMIQ 409
+ GY + F RV F+ Q
Sbjct: 64 RL---GGYNTNHFFRVDKGFVAQ 83
>At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 290
Score = 32.3 bits (70), Expect = 0.25
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 269 VGNIVIGLFGKTVPKTVDNFYQLAQKPEGEGYKGSKFHRV 388
+G +V+GL+G+ VP TV F ++ YK + H++
Sbjct: 85 LGRVVLGLYGRHVPITVSTFKRMCTS-SSTSYKNTPVHKI 123
>At5g06905.1 68418.m00780 cytochrome P450 family protein similar to
SP|Q42798|C931_SOYBN Cytochrome P450 93A1 (EC 1.14.-.-)
{Glycine max}; contains Pfam profile PF00067: Cytochrome
P450
Length = 521
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -2
Query: 496 MAELKVFIIETFSINAPTTSAITLGKISALYHEVVNHPMEFASL 365
M ++K FI+E F + TTSA ++ E++NHP FA +
Sbjct: 288 MNQIKFFILELFMASLDTTSAALQWTMT----ELINHPDIFAKI 327
>At2g14880.1 68415.m01691 SWIB complex BAF60b domain-containing
protein contains Pfam profile PF02201: BAF60b domain of
the SWIB complex
Length = 141
Score = 28.7 bits (61), Expect = 3.1
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = -3
Query: 297 PKRPITMFPTASSPIFM*KVTL*VTFGPLGESSD*ATATNKRIPRTVAKAAMIIKSLVFV 118
P P++ AS P ++ VT ESS+ TATNKR+PR + K + + +
Sbjct: 22 PSTPLSSLRFASHPAAKLRLVRAVTSAT--ESSE-PTATNKRVPRGIMKPRPVSPEMQDI 78
Query: 117 FAIVAIL-TQRL-TIW 76
+ I TQ L IW
Sbjct: 79 VELPEIARTQALKRIW 94
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 272 GNIVIGLFGKTVPKTVDNFYQLAQKP 349
GN + GLFG +P V QLAQ P
Sbjct: 143 GNAMSGLFGAGLPDLVQTQQQLAQNP 168
>At3g43300.1 68416.m04570 guanine nucleotide exchange family protein
similar to SP|Q9Y6D5 Brefeldin A-inhibited guanine
nucleotide-exchange protein 2 {Homo sapiens}; contains
Pfam profile PF01369: Sec7 domain
Length = 1756
Score = 27.9 bits (59), Expect = 5.4
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = -2
Query: 511 PSSTIMAELKVFIIETFSINAPTTSAITLGKISALYHEVVNHPMEFASLVALSLWFLCQL 332
P ST++ LKV + S LG I Y+ +N P+ A+ A+ L Q+
Sbjct: 170 PDSTVLQVLKVLLTAVASGKFKVHGEPLLGVIRVCYNIALNSPINQATSKAM----LTQM 225
Query: 331 IEVVY 317
I +V+
Sbjct: 226 ISIVF 230
>At5g66430.1 68418.m08378 S-adenosyl-L-methionine:carboxyl
methyltransferase family protein similar to
SAM:salicylic acid carboxyl methyltransferase (SAMT)
[GI:6002712][Clarkia breweri] and to SAM:benzoic acid
carboxyl methyltransferase
(BAMT)[GI:9789277][Antirrhinum majus]
Length = 354
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = +2
Query: 449 SIYGERFNDENFKLRH--YGAGWLSMANAGKDTNGSQFFITTVKTP 580
S Y F ++ H Y WLS G + N S +ITT P
Sbjct: 123 SFYSRLFPRKSLHFVHSSYSLHWLSKVPKGLEKNSSSVYITTSSPP 168
>At3g29310.1 68416.m03680 calmodulin-binding protein-related
Length = 551
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 482 SFHH*NVLHKCSDHQCHH 429
S HH N H CS HQ HH
Sbjct: 3 SHHHHNHNHVCSRHQNHH 20
>At3g21170.1 68416.m02674 F-box family protein contains Pfam
profile: PF00646 F-box domain
Length = 394
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = -2
Query: 322 VYSLRNSLAEKTNNNVPYCFIT-NFHVKSYLMSNF 221
VYS+R++L N+ PY IT +F +K +L +N+
Sbjct: 64 VYSVRSNLRGIHNSVAPYVNITCHFSLKEHLSNNY 98
>At5g03110.1 68418.m00259 expressed protein various predicted
proteins, Arabidopsis thaliana
Length = 283
Score = 27.1 bits (57), Expect = 9.5
Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 2/105 (1%)
Frame = -2
Query: 511 PSSTIMAELKVFII--ETFSINAPTTSAITLGKISALYHEVVNHPMEFASLVALSLWFLC 338
P++ + E+K I E F I S T I+AL +S +A W
Sbjct: 148 PTTESVREIKEEIEGEENFEIPKLFVSPATTPPINALLLTRSRSAPYRSSSLAFRFWEEN 207
Query: 337 QLIEVVYSLRNSLAEKTNNNVPYCFITNFHVKSYLMSNFRSFRRI 203
EV S +N +EKT++ VP I FH Y+ + F ++
Sbjct: 208 NQREVE-SQQNVRSEKTDSEVPIEKINGFHEPEYVDRDEEEFTKL 251
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,223,079
Number of Sequences: 28952
Number of extensions: 234084
Number of successful extensions: 607
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 585
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1187288784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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