Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_K01
         (604 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.)              42   3e-04
SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012)               41   9e-04
SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.)              39   0.004
SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.)              36   0.033
SB_7503| Best HMM Match : No HMM Matches (HMM E-Value=.)               34   0.10 
SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.18 
SB_29831| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.41 
SB_40204| Best HMM Match : KOW (HMM E-Value=0.00011)                   32   0.41 
SB_37731| Best HMM Match : TPD52 (HMM E-Value=1.2)                     31   0.72 
SB_2443| Best HMM Match : GrpE (HMM E-Value=1.9)                       31   0.72 
SB_43303| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.3  
SB_7268| Best HMM Match : DUF472 (HMM E-Value=0.99)                    30   1.3  
SB_18574| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.2  
SB_14231| Best HMM Match : RVT_1 (HMM E-Value=0.00045)                 28   5.1  
SB_47141| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.7  
SB_19521| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.7  
SB_1712| Best HMM Match : Peptidase_C14 (HMM E-Value=1.6e-21)          28   6.7  
SB_197| Best HMM Match : LISCH7 (HMM E-Value=1.3)                      28   6.7  
SB_4328| Best HMM Match : Vicilin_N (HMM E-Value=0.39)                 27   8.8  

>SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 358

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 34/108 (31%), Positives = 50/108 (46%)
 Frame = +3

Query: 246 NLYLKRSYEYLLSASYFNNYKINRAGFSKMFRKLSDEAWEKAIDLIKHVTMRGINMDFSR 425
           NL L  SY YL  A +F+   +   GF K F K S E  E A  L+K    RG  +    
Sbjct: 208 NLELYASYAYLSMAFHFDRDDVALPGFHKYFLKASHEEREHAEKLMKFQNERGGRIVL-- 265

Query: 426 RSIYDPEPGKKYVVELHELDSLAKALDTQKELAERAFTIHREATKNAN 569
           + I  PE  +        +DS+  ALD +K + +    +H+ A K+ +
Sbjct: 266 QDIKKPEKDEWGC----GMDSIQVALDLEKHVNQALLDLHKIAEKHGD 309


>SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012)
          Length = 126

 Score = 40.7 bits (91), Expect = 9e-04
 Identities = 20/53 (37%), Positives = 27/53 (50%)
 Frame = +3

Query: 213 SHVAGELQAYANLYLKRSYEYLLSASYFNNYKINRAGFSKMFRKLSDEAWEKA 371
           + + G +    N  L   Y YL  A +F+   IN  GF+K F+K S E WE A
Sbjct: 32  NQLEGPINKQINKELYAHYTYLSMAFHFDRDDINLPGFNKFFKKASKEEWEHA 84


>SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 289

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 32/108 (29%), Positives = 48/108 (44%)
 Frame = +3

Query: 246 NLYLKRSYEYLLSASYFNNYKINRAGFSKMFRKLSDEAWEKAIDLIKHVTMRGINMDFSR 425
           NL L  SY Y+  A +F+   +   GF K F K S E  E A  L K    RG  +    
Sbjct: 140 NLELYASYVYMSMAYHFDRDDVALPGFHKYFMKASHEEREHAEKLAKFQLQRGGRIVL-- 197

Query: 426 RSIYDPEPGKKYVVELHELDSLAKALDTQKELAERAFTIHREATKNAN 569
           + I  PE       +    D++  ALD +K + +    +H+ A K+ +
Sbjct: 198 QDIKRPERDDWGCGQ----DAIQAALDLEKHVNQALLDLHKVAEKHGD 241


>SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 304

 Score = 35.5 bits (78), Expect = 0.033
 Identities = 31/108 (28%), Positives = 47/108 (43%)
 Frame = +3

Query: 246 NLYLKRSYEYLLSASYFNNYKINRAGFSKMFRKLSDEAWEKAIDLIKHVTMRGINMDFSR 425
           NL L  SY Y+  A +F+   +   GF K F + S E  E A  L K    RG  +    
Sbjct: 155 NLELYASYVYMSMAFHFDRDDVALPGFHKYFMEASHEEREHAEKLAKFQLQRGGRIVL-- 212

Query: 426 RSIYDPEPGKKYVVELHELDSLAKALDTQKELAERAFTIHREATKNAN 569
           + I  PE       +    D +  ALD +K + +    +H+ A K+ +
Sbjct: 213 QDIKRPERDDWGCGQ----DVIQAALDLEKHVNQALHDLHKVAEKHGD 256


>SB_7503| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 203

 Score = 33.9 bits (74), Expect = 0.10
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = +3

Query: 255 LKRSYEYLLSASYFNNYKINRAGFSKMFRKLSDEAWEKA 371
           ++R YE    A +F+   IN  GF+K F+K S E WE A
Sbjct: 24  MRRDYE----AFHFDRDDINLPGFNKFFKKASKEEWEHA 58


>SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 394

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = +3

Query: 246 NLYLKRSYEYLLSASYFNNYKINRAGFSKMFRKLSDEAWEKA 371
           NL L  SY Y   A YF+   ++  GF K F+K + E  E A
Sbjct: 21  NLELYASYVYTSMACYFDREDVHLPGFHKFFKKQAHEEREHA 62


>SB_29831| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 171

 Score = 31.9 bits (69), Expect = 0.41
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +3

Query: 411 MDFSRRSIYDPEPGKKYVVELHELDSLAKALDTQKELAE 527
           +DF        EP +++ +    LD LAK+LDT+K  AE
Sbjct: 84  LDFKNNESKGEEPKEQHSIHESLLDDLAKSLDTKKRTAE 122


>SB_40204| Best HMM Match : KOW (HMM E-Value=0.00011)
          Length = 1198

 Score = 31.9 bits (69), Expect = 0.41
 Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
 Frame = +3

Query: 360  WEKAIDLIKHVTMRGINMDFSRRSIYDPEPGKKYVVELHELDSLAKALDTQKELAER--A 533
            W++++D++K    +  N+D        P P    +  +H+   +  AL T+KEL  R  A
Sbjct: 845  WKESLDILKFAVSKSSNLDTP-----PPRPASS-IWSVHDSTWVIDALPTKKELPGRTLA 898

Query: 534  FTIHREATKNANYLHDPEIAQ 596
            FT    AT        PE A+
Sbjct: 899  FTFDLSATPVIGRRGTPECAE 919


>SB_37731| Best HMM Match : TPD52 (HMM E-Value=1.2)
          Length = 499

 Score = 31.1 bits (67), Expect = 0.72
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +3

Query: 411 MDFSRRSIYDPEPGKKYVVELHELDSLAKALDTQKELAE 527
           +DF+       EP +++ +    LD+LAK+LDT++  AE
Sbjct: 84  LDFNNNESKAEEPKEQHFIHESLLDNLAKSLDTKERTAE 122


>SB_2443| Best HMM Match : GrpE (HMM E-Value=1.9)
          Length = 171

 Score = 31.1 bits (67), Expect = 0.72
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +3

Query: 411 MDFSRRSIYDPEPGKKYVVELHELDSLAKALDTQKELAE 527
           +DF+       EP +++ +    LD LAK+LDT+K  AE
Sbjct: 84  LDFNNNESKAAEPEEQHSIHELLLDDLAKSLDTKKRTAE 122


>SB_43303| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 116

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +3

Query: 411 MDFSRRSIYDPEPGKKYVVELHELDSLAKALDTQKELAE 527
           +DF+       EP +++ +    LD LAK+LDT++  AE
Sbjct: 54  LDFNNNESKAEEPKEQHSIHESLLDDLAKSLDTKERTAE 92


>SB_7268| Best HMM Match : DUF472 (HMM E-Value=0.99)
          Length = 554

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +3

Query: 411 MDFSRRSIYDPEPGKKYVVELHELDSLAKALDTQKELAE 527
           +DF+       EP +++ +    LD LAK+LDT++  AE
Sbjct: 84  LDFNNNESKAEEPKEQHSIHESLLDDLAKSLDTKERTAE 122


>SB_18574| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 157

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +3

Query: 411 MDFSRRSIYDPEPGKKYVVELHELDSLAKALDTQKELAE 527
           +DF++      EP +++ +    LD LAK +DT++  AE
Sbjct: 84  LDFNKNESKAAEPEEQHSIHESLLDDLAKPIDTKERTAE 122


>SB_14231| Best HMM Match : RVT_1 (HMM E-Value=0.00045)
          Length = 519

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +3

Query: 411 MDFSRRSIYDPEPGKKYVVELHELDSLAKALDTQKELAE-RAFTIHREATK 560
           +DF+       EP +++ +    LD LAK+LDT++  A    F + R+  K
Sbjct: 81  LDFNNNESKAAEPEEQHSIHELLLDDLAKSLDTKERHASFELFQLRRDDIK 131


>SB_47141| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 233

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 24/88 (27%), Positives = 40/88 (45%)
 Frame = +3

Query: 324 FSKMFRKLSDEAWEKAIDLIKHVTMRGINMDFSRRSIYDPEPGKKYVVELHELDSLAKAL 503
           F+++ R  S E  + A+ L  HV     +    + S++  +     +     LD + KAL
Sbjct: 131 FAQLQRSPSQELSDYAMRLFDHVNHFADSAK-RKGSVWPLQIMLLILCPKEFLDGVKKAL 189

Query: 504 DTQKELAERAFTIHREATKNANYLHDPE 587
            + K L E A  +  +  K ANY+  PE
Sbjct: 190 TSTKNLTESAAVVSVKLCKAANYMR-PE 216


>SB_19521| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 396

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 6/41 (14%)
 Frame = +3

Query: 405 INMDFSR----RSIYDPEPGKKYVVELH--ELDSLAKALDT 509
           I ++FS+     +IYDPE  K+ VV +H  E+D +  A +T
Sbjct: 196 IKLEFSKAIHDENIYDPEDRKQQVVHIHTTEIDDMCLADNT 236


>SB_1712| Best HMM Match : Peptidase_C14 (HMM E-Value=1.6e-21)
          Length = 594

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 6/41 (14%)
 Frame = +3

Query: 405 INMDFSR----RSIYDPEPGKKYVVELH--ELDSLAKALDT 509
           I ++FS+     +IYDPE  K+ VV +H  E+D +  A +T
Sbjct: 240 IKLEFSKAIHDENIYDPEDRKQQVVHIHTTEIDDICLADNT 280


>SB_197| Best HMM Match : LISCH7 (HMM E-Value=1.3)
          Length = 120

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 14/37 (37%), Positives = 15/37 (40%)
 Frame = -3

Query: 161 CRCRHTFSCHSFVTTVTCVNARQSQETSYCECDFLHC 51
           CRC  T  C  F T   C  AR     + C C   HC
Sbjct: 35  CRCFAT-RCRCFATRCHCFAARCRCFAARCRCFAAHC 70



 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/36 (36%), Positives = 15/36 (41%)
 Frame = -3

Query: 161 CRCRHTFSCHSFVTTVTCVNARQSQETSYCECDFLH 54
           CRC  T  CH F     C  AR     ++C C   H
Sbjct: 42  CRCFAT-RCHCFAARCRCFAARCRCFAAHCRCFAAH 76


>SB_4328| Best HMM Match : Vicilin_N (HMM E-Value=0.39)
          Length = 738

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 9/35 (25%), Positives = 21/35 (60%)
 Frame = +3

Query: 483 DSLAKALDTQKELAERAFTIHREATKNANYLHDPE 587
           D +  AL  ++E+   A ++H++  ++ + LHD +
Sbjct: 421 DKVQDALSLRREVTSHAISVHQDVLESMHTLHDEQ 455


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,969,374
Number of Sequences: 59808
Number of extensions: 346722
Number of successful extensions: 904
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 904
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1463691625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)